RNA–Protein interactions for RNA: ENST00000528762.1

BRCA2-203, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 4

Gene BRCA2, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-203ENST00000528762 EPB41L4AQ9HCS5 686 aaPredicted RBP4.48□□□□□ -1.69
BRCA2-203ENST00000528762 AP5S1Q9NUS5 200 aa4.48□□□□□ -1.69
BRCA2-203ENST00000528762 INTS7Q9NVH2 962 aaKnown RBP4.48□□□□□ -1.69
BRCA2-203ENST00000528762 ERVK13-1Q9NX77 482 aa4.48□□□□□ -1.69
BRCA2-203ENST00000528762 MAGEC2Q9UBF1 373 aaPredicted RBP4.48□□□□□ -1.69
BRCA2-203ENST00000528762 THRAP3Q9Y2W1 955 aaKnown RBP4.48□□□□□ -1.69
BRCA2-203ENST00000528762 TAF6LQ9Y6J9 622 aa4.48□□□□□ -1.69
BRCA2-203ENST00000528762 FADS2P1A8MWK0 482 aa4.47□□□□□ -1.69
BRCA2-203ENST00000528762 TBX1O43435 398 aa4.47□□□□□ -1.69
BRCA2-203ENST00000528762 EFCAB14O75071 495 aa4.47□□□□□ -1.69
BRCA2-203ENST00000528762 VAMP4O75379 141 aa4.47□□□□□ -1.69
BRCA2-203ENST00000528762 CPP00450 1065 aa4.47□□□□□ -1.69
BRCA2-203ENST00000528762 PRKCAP17252 672 aa4.47□□□□□ -1.69
BRCA2-203ENST00000528762 SDSP20132 328 aa4.47□□□□□ -1.69
BRCA2-203ENST00000528762 KIR2DL1P43626 348 aaPredicted RBP4.47□□□□□ -1.69
BRCA2-203ENST00000528762 KIR2DL2P43627 348 aaPredicted RBP4.47□□□□□ -1.69
BRCA2-203ENST00000528762 KCNJ6P48051 423 aa4.47□□□□□ -1.69
BRCA2-203ENST00000528762 AFF3P51826 1226 aaKnown RBP4.47□□□□□ -1.69
BRCA2-203ENST00000528762 EVA1CP58658 441 aa4.47□□□□□ -1.69
BRCA2-203ENST00000528762 RAB3GAP1Q15042 981 aa4.47□□□□□ -1.69
BRCA2-203ENST00000528762 GTF2IRD2BQ6EKJ0 949 aa4.47□□□□□ -1.69
BRCA2-203ENST00000528762 NOL8Q76FK4 1167 aaKnown RBP4.47□□□□□ -1.69
BRCA2-203ENST00000528762 GTF2IRD2Q86UP8 949 aa4.47□□□□□ -1.69
BRCA2-203ENST00000528762 LRRTM3Q86VH5 581 aa4.47□□□□□ -1.69
BRCA2-203ENST00000528762 DDX42Q86XP3 938 aaKnown RBP eCLIP4.47□□□□□ -1.69
BRCA2-203ENST00000528762 FIBCD1Q8N539 461 aa4.47□□□□□ -1.69
BRCA2-203ENST00000528762 MARCH10Q8NA82 808 aaPredicted RBP4.47□□□□□ -1.69
BRCA2-203ENST00000528762 NUP43Q8NFH3 380 aa4.47□□□□□ -1.69
BRCA2-203ENST00000528762 BTN2A2Q8WVV5 523 aa4.47□□□□□ -1.69
BRCA2-203ENST00000528762 KCTD13Q8WZ19 329 aa4.47□□□□□ -1.69
BRCA2-203ENST00000528762 FCRL2Q96LA5 508 aaPredicted RBP4.47□□□□□ -1.69
BRCA2-203ENST00000528762 SIGLEC10Q96LC7 697 aa4.47□□□□□ -1.69
BRCA2-203ENST00000528762 KCNC2Q96PR1 638 aa4.47□□□□□ -1.69
BRCA2-203ENST00000528762 NOL6Q9H6R4 1146 aaKnown RBP4.47□□□□□ -1.69
BRCA2-203ENST00000528762 CYP26B1Q9NR63 512 aa4.47□□□□□ -1.69
BRCA2-203ENST00000528762 PRR13Q9NZ81 148 aa4.47□□□□□ -1.69
BRCA2-203ENST00000528762 CHPF2Q9P2E5 772 aa4.47□□□□□ -1.69
BRCA2-203ENST00000528762 IMPACTQ9P2X3 320 aa4.47□□□□□ -1.69
BRCA2-203ENST00000528762 CGGBP1Q9UFW8 167 aaPredicted RBP4.47□□□□□ -1.69
BRCA2-203ENST00000528762 NDOR1Q9UHB4 597 aa4.47□□□□□ -1.69
BRCA2-203ENST00000528762 MAPRE3Q9UPY8 281 aa4.47□□□□□ -1.69
BRCA2-203ENST00000528762 SF3B6Q9Y3B4 125 aaKnown RBP4.47□□□□□ -1.69
BRCA2-203ENST00000528762 FHOD1Q9Y613 1164 aa4.47□□□□□ -1.69
BRCA2-203ENST00000528762 OTOL1A6NHN0 477 aaPredicted RBP4.46□□□□□ -1.7
BRCA2-203ENST00000528762 APPP05067 770 aa4.46□□□□□ -1.7
BRCA2-203ENST00000528762 PNLIPP16233 465 aa4.46□□□□□ -1.7
BRCA2-203ENST00000528762 CPEP16870 476 aa4.46□□□□□ -1.7
BRCA2-203ENST00000528762 CEBPAP49715 358 aaPredicted RBP4.46□□□□□ -1.7
BRCA2-203ENST00000528762 SF1Q15637 639 aaKnown RBP4.46□□□□□ -1.7
BRCA2-203ENST00000528762 TRIM61Q5EBN2 209 aa4.46□□□□□ -1.7
BRCA2-203ENST00000528762 LCE5AQ5TCM9 118 aa4.46□□□□□ -1.7
BRCA2-203ENST00000528762 CCDC181Q5TID7 509 aa4.46□□□□□ -1.7
BRCA2-203ENST00000528762 AFAP1L2Q8N4X5 818 aa4.46□□□□□ -1.7
BRCA2-203ENST00000528762 SLC7A14Q8TBB6 771 aa4.46□□□□□ -1.7
BRCA2-203ENST00000528762 PTPRN2Q92932 1015 aa4.46□□□□□ -1.7
BRCA2-203ENST00000528762 MAGEB10Q96LZ2 347 aaPredicted RBP4.46□□□□□ -1.7
BRCA2-203ENST00000528762 JMJD8Q96S16 334 aa4.46□□□□□ -1.7
BRCA2-203ENST00000528762 CEP89Q96ST8 783 aa4.46□□□□□ -1.7
BRCA2-203ENST00000528762 DSCC1Q9BVC3 393 aa4.46□□□□□ -1.7
BRCA2-203ENST00000528762 TARS2Q9BW92 718 aaKnown RBP4.46□□□□□ -1.7
BRCA2-203ENST00000528762 KRTAP9-3Q9BYQ3 159 aa4.46□□□□□ -1.7
BRCA2-203ENST00000528762 NKX2-4Q9H2Z4 354 aa4.46□□□□□ -1.7
BRCA2-203ENST00000528762 CRTAC1Q9NQ79 661 aa4.46□□□□□ -1.7
BRCA2-203ENST00000528762 SLC52A1Q9NWF4 448 aa4.46□□□□□ -1.7
BRCA2-203ENST00000528762 KLHL14Q9P2G3 628 aa4.46□□□□□ -1.7
BRCA2-203ENST00000528762 MCM8Q9UJA3 840 aa4.46□□□□□ -1.7
BRCA2-203ENST00000528762 PLA2G2DQ9UNK4 145 aa4.46□□□□□ -1.7
BRCA2-203ENST00000528762 HCFC2Q9Y5Z7 792 aa4.46□□□□□ -1.7
BRCA2-203ENST00000528762 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.45□□□□□ -1.7
BRCA2-203ENST00000528762 BLACEA4D250 179 aa4.45□□□□□ -1.7
BRCA2-203ENST00000528762 ALG1L2C9J202 215 aa4.45□□□□□ -1.7
BRCA2-203ENST00000528762 N4BP3O15049 544 aa4.45□□□□□ -1.7
BRCA2-203ENST00000528762 FOXD2O60548 495 aaPredicted RBP4.45□□□□□ -1.7
BRCA2-203ENST00000528762 S100BP04271 92 aaPredicted RBP4.45□□□□□ -1.7
BRCA2-203ENST00000528762 ASLP04424 464 aa4.45□□□□□ -1.7
BRCA2-203ENST00000528762 SNRPB2P08579 225 aaKnown RBP4.45□□□□□ -1.7
BRCA2-203ENST00000528762 GSTM1P09488 218 aa4.45□□□□□ -1.7
BRCA2-203ENST00000528762 C6orf222P0C671 652 aaPredicted RBP4.45□□□□□ -1.7
BRCA2-203ENST00000528762 MSL3P1P0C860 447 aa4.45□□□□□ -1.7
BRCA2-203ENST00000528762 ECI1P42126 302 aa4.45□□□□□ -1.7
BRCA2-203ENST00000528762 NOP2P46087 812 aaKnown RBP4.45□□□□□ -1.7
BRCA2-203ENST00000528762 LIMS1P48059 325 aa4.45□□□□□ -1.7
BRCA2-203ENST00000528762 NEK4P51957 841 aa4.45□□□□□ -1.7
BRCA2-203ENST00000528762 GFRA1P56159 465 aa4.45□□□□□ -1.7
BRCA2-203ENST00000528762 CYP4F8P98187 520 aa4.45□□□□□ -1.7
BRCA2-203ENST00000528762 AMPD2Q01433 879 aa4.45□□□□□ -1.7
BRCA2-203ENST00000528762 EXOSC10Q01780 885 aaKnown RBP4.45□□□□□ -1.7
BRCA2-203ENST00000528762 POU4F1Q01851 419 aa4.45□□□□□ -1.7
BRCA2-203ENST00000528762 MAP4K2Q12851 820 aa4.45□□□□□ -1.7
BRCA2-203ENST00000528762 GRB10Q13322 594 aa4.45□□□□□ -1.7
BRCA2-203ENST00000528762 WWC2Q6AWC2 1192 aa4.45□□□□□ -1.7
BRCA2-203ENST00000528762 UBE2R2Q712K3 238 aaPredicted RBP4.45□□□□□ -1.7
BRCA2-203ENST00000528762 SLCO6A1Q86UG4 719 aa4.45□□□□□ -1.7
BRCA2-203ENST00000528762 IGDCC3Q8IVU1 814 aa4.45□□□□□ -1.7
BRCA2-203ENST00000528762 TMEFF1Q8IYR6 380 aa4.45□□□□□ -1.7
BRCA2-203ENST00000528762 TMEM52Q8NDY8 209 aa4.45□□□□□ -1.7
BRCA2-203ENST00000528762 ATL2Q8NHH9 583 aa4.45□□□□□ -1.7
BRCA2-203ENST00000528762 MZB1Q8WU39 189 aa4.45□□□□□ -1.7
BRCA2-203ENST00000528762 LEO1Q8WVC0 666 aaPredicted RBP4.45□□□□□ -1.7
BRCA2-203ENST00000528762 DACT3Q96B18 629 aaPredicted RBP4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms