RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 FAAP100Q0VG06 881 aa30.38■■■□□ 2.45
TSPAN4-217ENST00000527644 LY6KQ17RY6 165 aa30.38■■■□□ 2.45
TSPAN4-217ENST00000527644 SLC43A3Q8NBI5 491 aa30.38■■■□□ 2.45
TSPAN4-217ENST00000527644 SMARCC2Q8TAQ2 1214 aa30.38■■■□□ 2.45
TSPAN4-217ENST00000527644 AGXT2Q9BYV1 514 aa30.38■■■□□ 2.45
TSPAN4-217ENST00000527644 TMEM39AQ9NV64 488 aa30.38■■■□□ 2.45
TSPAN4-217ENST00000527644 CNTNAP5Q8WYK1 1306 aa30.38■■■□□ 2.45
TSPAN4-217ENST00000527644 KIAA1217Q5T5P2 1943 aa30.37■■■□□ 2.45
TSPAN4-217ENST00000527644 KIAA0355O15063 1070 aa30.37■■■□□ 2.45
TSPAN4-217ENST00000527644 GH1P01241 217 aa30.37■■■□□ 2.45
TSPAN4-217ENST00000527644 FXR1P51114 621 aaKnown RBP eCLIP30.37■■■□□ 2.45
TSPAN4-217ENST00000527644 FUT2Q10981 343 aa30.37■■■□□ 2.45
TSPAN4-217ENST00000527644 ITGA7Q13683 1181 aa30.37■■■□□ 2.45
TSPAN4-217ENST00000527644 PSTPIP2Q9H939 334 aa30.37■■■□□ 2.45
TSPAN4-217ENST00000527644 FAM217BQ9NTX9 383 aaPredicted RBP30.37■■■□□ 2.45
TSPAN4-217ENST00000527644 DDX41Q9UJV9 622 aaKnown RBP30.37■■■□□ 2.45
TSPAN4-217ENST00000527644 MRVI1Q9Y6F6 885 aa30.37■■■□□ 2.45
TSPAN4-217ENST00000527644 FRMPD4Q14CM0 1322 aa30.37■■■□□ 2.45
TSPAN4-217ENST00000527644 CCDC196A0A1B0GTZ2 297 aa30.36■■■□□ 2.45
TSPAN4-217ENST00000527644 MEIS2O14770 477 aa30.36■■■□□ 2.45
TSPAN4-217ENST00000527644 KPNA6O60684 536 aa30.36■■■□□ 2.45
TSPAN4-217ENST00000527644 METAP2P50579 478 aaKnown RBP eCLIP30.36■■■□□ 2.45
TSPAN4-217ENST00000527644 KCNV1Q6PIU1 500 aa30.36■■■□□ 2.45
TSPAN4-217ENST00000527644 USP17L6PQ6QN14 398 aa30.36■■■□□ 2.45
TSPAN4-217ENST00000527644 RUFY3Q7L099 469 aa30.36■■■□□ 2.45
TSPAN4-217ENST00000527644 IL31RAQ8NI17 732 aa30.36■■■□□ 2.45
TSPAN4-217ENST00000527644 ZSWIM6Q9HCJ5 1215 aa30.36■■■□□ 2.45
TSPAN4-217ENST00000527644 TLR3O15455 904 aaKnown RBP30.35■■■□□ 2.45
TSPAN4-217ENST00000527644 RGS20O76081 388 aa30.35■■■□□ 2.45
TSPAN4-217ENST00000527644 MYL3P08590 195 aa30.35■■■□□ 2.45
TSPAN4-217ENST00000527644 CDC27P30260 824 aa30.35■■■□□ 2.45
TSPAN4-217ENST00000527644 PURAQ00577 322 aaKnown RBP30.35■■■□□ 2.45
TSPAN4-217ENST00000527644 HEATR3Q7Z4Q2 680 aa30.35■■■□□ 2.45
TSPAN4-217ENST00000527644 FAM126BQ8IXS8 530 aa30.35■■■□□ 2.45
TSPAN4-217ENST00000527644 V9GY48 417 aaPredicted RBP30.35■■■□□ 2.45
TSPAN4-217ENST00000527644 LTBP2Q14767 1821 aa30.34■■■□□ 2.45
TSPAN4-217ENST00000527644 GRIN2DO15399 1336 aa30.34■■■□□ 2.45
TSPAN4-217ENST00000527644 ARHGAP1Q07960 439 aa30.34■■■□□ 2.45
TSPAN4-217ENST00000527644 TDHQ8IZJ6 230 aa30.34■■■□□ 2.45
TSPAN4-217ENST00000527644 BADQ92934 168 aa30.34■■■□□ 2.45
TSPAN4-217ENST00000527644 MTG1Q9BT17 334 aaPredicted RBP30.34■■■□□ 2.45
TSPAN4-217ENST00000527644 TM6SF1Q9BZW5 370 aa30.34■■■□□ 2.45
TSPAN4-217ENST00000527644 STAM2O75886 525 aa30.33■■■□□ 2.45
TSPAN4-217ENST00000527644 RAG1P15918 1043 aa30.33■■■□□ 2.45
TSPAN4-217ENST00000527644 PSMC6P62333 389 aa30.33■■■□□ 2.45
TSPAN4-217ENST00000527644 EMID1Q96A84 441 aaPredicted RBP30.33■■■□□ 2.45
TSPAN4-217ENST00000527644 CYP46A1Q9Y6A2 500 aa30.33■■■□□ 2.45
TSPAN4-217ENST00000527644 NID2Q14112 1375 aa30.32■■■□□ 2.44
TSPAN4-217ENST00000527644 TGFB3P10600 412 aa30.32■■■□□ 2.44
TSPAN4-217ENST00000527644 ADD1P35611 737 aaKnown RBP30.32■■■□□ 2.44
TSPAN4-217ENST00000527644 AFG1LQ8WV93 481 aa30.32■■■□□ 2.44
TSPAN4-217ENST00000527644 GPKOWQ92917 476 aaPredicted RBP eCLIP30.32■■■□□ 2.44
TSPAN4-217ENST00000527644 TBX21Q9UL17 535 aa30.32■■■□□ 2.44
TSPAN4-217ENST00000527644 hCG_1984214I3L0E3 225 aa30.31■■■□□ 2.44
TSPAN4-217ENST00000527644 CD4P01730 458 aa30.31■■■□□ 2.44
TSPAN4-217ENST00000527644 ITGB8P26012 769 aa30.31■■■□□ 2.44
TSPAN4-217ENST00000527644 EVCP57679 992 aa30.31■■■□□ 2.44
TSPAN4-217ENST00000527644 LAMC2Q13753 1193 aa30.31■■■□□ 2.44
TSPAN4-217ENST00000527644 WWC2Q6AWC2 1192 aa30.31■■■□□ 2.44
TSPAN4-217ENST00000527644 XRRA1Q6P2D8 792 aa30.31■■■□□ 2.44
TSPAN4-217ENST00000527644 ZNF713Q8N859 430 aaPredicted RBP30.31■■■□□ 2.44
TSPAN4-217ENST00000527644 MMP3P08254 477 aa30.3■■■□□ 2.44
TSPAN4-217ENST00000527644 MRPS9P82933 396 aaKnown RBP30.3■■■□□ 2.44
TSPAN4-217ENST00000527644 GNPTABQ3T906 1256 aa30.3■■■□□ 2.44
TSPAN4-217ENST00000527644 PPP1R18Q6NYC8 613 aa30.3■■■□□ 2.44
TSPAN4-217ENST00000527644 TEX2Q8IWB9 1127 aa30.3■■■□□ 2.44
TSPAN4-217ENST00000527644 DHX37Q8IY37 1157 aaKnown RBP30.3■■■□□ 2.44
TSPAN4-217ENST00000527644 EIF5BO60841 1220 aaKnown RBP30.29■■■□□ 2.44
TSPAN4-217ENST00000527644 TIMP1P01033 207 aa30.29■■■□□ 2.44
TSPAN4-217ENST00000527644 PCNX4Q63HM2 1172 aa30.29■■■□□ 2.44
TSPAN4-217ENST00000527644 ZFP91Q96JP5 570 aaPredicted RBP30.29■■■□□ 2.44
TSPAN4-217ENST00000527644 INPP4AQ96PE3 977 aaPredicted RBP30.29■■■□□ 2.44
TSPAN4-217ENST00000527644 NAPAP54920 295 aa30.28■■■□□ 2.44
TSPAN4-217ENST00000527644 BARHL2Q9NY43 387 aa30.28■■■□□ 2.44
TSPAN4-217ENST00000527644 SPDYE3A6NKU9 549 aa30.27■■■□□ 2.44
TSPAN4-217ENST00000527644 ICAM3P32942 547 aa30.27■■■□□ 2.44
TSPAN4-217ENST00000527644 TOB2Q14106 344 aaPredicted RBP30.27■■■□□ 2.44
TSPAN4-217ENST00000527644 DGKDQ16760 1214 aa30.27■■■□□ 2.44
TSPAN4-217ENST00000527644 UBE2SQ16763 222 aa30.27■■■□□ 2.44
TSPAN4-217ENST00000527644 LRIT3Q3SXY7 679 aa30.27■■■□□ 2.44
TSPAN4-217ENST00000527644 CELF3Q5SZQ8 465 aaKnown RBP30.27■■■□□ 2.44
TSPAN4-217ENST00000527644 MYSM1Q5VVJ2 828 aa30.27■■■□□ 2.44
TSPAN4-217ENST00000527644 PPTC7Q8NI37 304 aa30.27■■■□□ 2.44
TSPAN4-217ENST00000527644 ALDH8A1Q9H2A2 487 aaPredicted RBP30.27■■■□□ 2.44
TSPAN4-217ENST00000527644 RTEL1Q9NZ71 1219 aa30.27■■■□□ 2.44
TSPAN4-217ENST00000527644 STXBP3O00186 592 aa30.26■■■□□ 2.43
TSPAN4-217ENST00000527644 PDIA3P30101 505 aaKnown RBP30.26■■■□□ 2.43
TSPAN4-217ENST00000527644 SP2Q02086 613 aa30.26■■■□□ 2.43
TSPAN4-217ENST00000527644 PFKFB3Q16875 520 aaPredicted RBP30.26■■■□□ 2.43
TSPAN4-217ENST00000527644 NBPF20Q3BBV1 942 aa30.26■■■□□ 2.43
TSPAN4-217ENST00000527644 TYW1BQ6NUM6 668 aa30.26■■■□□ 2.43
TSPAN4-217ENST00000527644 NFRKBQ6P4R8 1299 aa30.26■■■□□ 2.43
TSPAN4-217ENST00000527644 UPF3BQ9BZI7 483 aaKnown RBP30.26■■■□□ 2.43
TSPAN4-217ENST00000527644 RIC8AQ9NPQ8 531 aa30.26■■■□□ 2.43
TSPAN4-217ENST00000527644 SCN10AQ9Y5Y9 1956 aa30.26■■■□□ 2.43
TSPAN4-217ENST00000527644 B4GALT4O60513 344 aa30.25■■■□□ 2.43
TSPAN4-217ENST00000527644 GGPS1O95749 300 aa30.25■■■□□ 2.43
TSPAN4-217ENST00000527644 UBA1P22314 1058 aaKnown RBP30.25■■■□□ 2.43
TSPAN4-217ENST00000527644 GLT8D2Q9H1C3 349 aa30.25■■■□□ 2.43
TSPAN4-217ENST00000527644 TRPV6Q9H1D0 765 aa30.25■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms