RNA–Protein interactions for RNA: ENST00000527027.1

PTPRU-210, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-210ENST00000527027 COL20A1Q9P218 1284 aa18.84■□□□□ 0.61
PTPRU-210ENST00000527027 NEDD4P46934 1319 aa18.83■□□□□ 0.61
PTPRU-210ENST00000527027 WDR5P61964 334 aaKnown RBP18.83■□□□□ 0.6
PTPRU-210ENST00000527027 RBL2Q08999 1139 aa18.83■□□□□ 0.6
PTPRU-210ENST00000527027 DGKDQ16760 1214 aa18.83■□□□□ 0.6
PTPRU-210ENST00000527027 IQCA1Q86XH1 822 aa18.83■□□□□ 0.6
PTPRU-210ENST00000527027 ANKS1AQ92625 1134 aa18.83■□□□□ 0.6
PTPRU-210ENST00000527027 HLA-CQ95604 372 aa18.83■□□□□ 0.6
PTPRU-210ENST00000527027 RILPL2Q969X0 211 aa18.83■□□□□ 0.6
PTPRU-210ENST00000527027 RMDN3Q96TC7 470 aa18.83■□□□□ 0.6
PTPRU-210ENST00000527027 KAT14Q9H8E8 782 aa18.83■□□□□ 0.6
PTPRU-210ENST00000527027 LPXNO60711 386 aa18.82■□□□□ 0.6
PTPRU-210ENST00000527027 SDSP20132 328 aa18.82■□□□□ 0.6
PTPRU-210ENST00000527027 RRP1P56182 461 aaKnown RBP18.82■□□□□ 0.6
PTPRU-210ENST00000527027 CNKSR3Q6P9H4 555 aa18.82■□□□□ 0.6
PTPRU-210ENST00000527027 LRRC8DQ7L1W4 858 aa18.82■□□□□ 0.6
PTPRU-210ENST00000527027 DHX38Q92620 1227 aaKnown RBP18.82■□□□□ 0.6
PTPRU-210ENST00000527027 ZBED2Q9BTP6 218 aa18.82■□□□□ 0.6
PTPRU-210ENST00000527027 GTF2IRD1Q9UHL9 959 aa18.82■□□□□ 0.6
PTPRU-210ENST00000527027 DDX41Q9UJV9 622 aaKnown RBP18.82■□□□□ 0.6
PTPRU-210ENST00000527027 MRPL11Q9Y3B7 192 aaKnown RBP18.82■□□□□ 0.6
PTPRU-210ENST00000527027 TCF20Q9UGU0 1960 aaKnown RBP18.82■□□□□ 0.6
PTPRU-210ENST00000527027 TET1Q8NFU7 2136 aa18.82■□□□□ 0.6
PTPRU-210ENST00000527027 KDM4AO75164 1064 aa18.81■□□□□ 0.6
PTPRU-210ENST00000527027 EIF3JO75822 258 aaKnown RBP18.81■□□□□ 0.6
PTPRU-210ENST00000527027 CXCL10P02778 98 aa18.81■□□□□ 0.6
PTPRU-210ENST00000527027 CKBP12277 381 aa18.81■□□□□ 0.6
PTPRU-210ENST00000527027 QRICH1Q2TAL8 776 aa18.81■□□□□ 0.6
PTPRU-210ENST00000527027 ASPRV1Q53RT3 343 aa18.81■□□□□ 0.6
PTPRU-210ENST00000527027 ARHGEF16Q5VV41 709 aa18.81■□□□□ 0.6
PTPRU-210ENST00000527027 FBXO11Q86XK2 927 aa18.81■□□□□ 0.6
PTPRU-210ENST00000527027 C7orf31Q8N865 590 aa18.81■□□□□ 0.6
PTPRU-210ENST00000527027 EMID1Q96A84 441 aaPredicted RBP18.81■□□□□ 0.6
PTPRU-210ENST00000527027 CRBNQ96SW2 442 aa18.81■□□□□ 0.6
PTPRU-210ENST00000527027 ZSCAN10Q96SZ4 725 aaPredicted RBP18.81■□□□□ 0.6
PTPRU-210ENST00000527027 LMCD1Q9NZU5 365 aa18.81■□□□□ 0.6
PTPRU-210ENST00000527027 HDAC6Q9UBN7 1215 aa18.81■□□□□ 0.6
PTPRU-210ENST00000527027 ABHD14A-ACY1A0A1B0GW23 586 aa18.8■□□□□ 0.6
PTPRU-210ENST00000527027 LCHNA4D1U4 455 aa18.8■□□□□ 0.6
PTPRU-210ENST00000527027 PSEN2P49810 448 aa18.8■□□□□ 0.6
PTPRU-210ENST00000527027 DEFB103AP81534 67 aa18.8■□□□□ 0.6
PTPRU-210ENST00000527027 LAMC2Q13753 1193 aa18.8■□□□□ 0.6
PTPRU-210ENST00000527027 SPRED2Q7Z698 418 aa18.8■□□□□ 0.6
PTPRU-210ENST00000527027 TMCO2Q7Z6W1 182 aaPredicted RBP18.8■□□□□ 0.6
PTPRU-210ENST00000527027 RAD9AQ99638 391 aa18.8■□□□□ 0.6
PTPRU-210ENST00000527027 ALG1Q9BT22 464 aa18.8■□□□□ 0.6
PTPRU-210ENST00000527027 KATNAL1Q9BW62 490 aa18.8■□□□□ 0.6
PTPRU-210ENST00000527027 LNPKQ9C0E8 428 aa18.8■□□□□ 0.6
PTPRU-210ENST00000527027 JMJD4Q9H9V9 463 aa18.8■□□□□ 0.6
PTPRU-210ENST00000527027 VAT1LQ9HCJ6 419 aa18.8■□□□□ 0.6
PTPRU-210ENST00000527027 DHX16O60231 1041 aaKnown RBP18.79■□□□□ 0.6
PTPRU-210ENST00000527027 NBNO60934 754 aa18.79■□□□□ 0.6
PTPRU-210ENST00000527027 NR3C2P08235 984 aa18.79■□□□□ 0.6
PTPRU-210ENST00000527027 EIF2AK2P19525 551 aaKnown RBP18.79■□□□□ 0.6
PTPRU-210ENST00000527027 PLA2G5P39877 138 aa18.79■□□□□ 0.6
PTPRU-210ENST00000527027 PTK7Q13308 1070 aa18.79■□□□□ 0.6
PTPRU-210ENST00000527027 PPTC7Q8NI37 304 aa18.79■□□□□ 0.6
PTPRU-210ENST00000527027 ZSWIM5Q9P217 1185 aa18.79■□□□□ 0.6
PTPRU-210ENST00000527027 MRVI1Q9Y6F6 885 aa18.79■□□□□ 0.6
PTPRU-210ENST00000527027 HAS3O00219 553 aa18.78■□□□□ 0.6
PTPRU-210ENST00000527027 EFCAB14O75071 495 aa18.78■□□□□ 0.6
PTPRU-210ENST00000527027 GJB5O95377 273 aa18.78■□□□□ 0.6
PTPRU-210ENST00000527027 F2P00734 622 aa18.78■□□□□ 0.6
PTPRU-210ENST00000527027 CFBP00751 764 aa18.78■□□□□ 0.6
PTPRU-210ENST00000527027 PARP1P09874 1014 aaKnown RBP18.78■□□□□ 0.6
PTPRU-210ENST00000527027 IKBKEQ14164 716 aa18.78■□□□□ 0.6
PTPRU-210ENST00000527027 MFSD10Q14728 455 aa18.78■□□□□ 0.6
PTPRU-210ENST00000527027 DHX37Q8IY37 1157 aaKnown RBP18.78■□□□□ 0.6
PTPRU-210ENST00000527027 ENAHQ8N8S7 591 aaPredicted RBP18.78■□□□□ 0.6
PTPRU-210ENST00000527027 FAM122AQ96E09 287 aa18.78■□□□□ 0.6
PTPRU-210ENST00000527027 EPHX3Q9H6B9 360 aa18.78■□□□□ 0.6
PTPRU-210ENST00000527027 PXMP2Q9NR77 195 aa18.78■□□□□ 0.6
PTPRU-210ENST00000527027 TANC1Q9C0D5 1861 aa18.77■□□□□ 0.6
PTPRU-210ENST00000527027 TRIP12Q14669 1992 aaPredicted RBP18.77■□□□□ 0.6
PTPRU-210ENST00000527027 B4E1Z4 1266 aa18.77■□□□□ 0.6
PTPRU-210ENST00000527027 PPFIA4O75335 1185 aa18.77■□□□□ 0.6
PTPRU-210ENST00000527027 HSD17B4P51659 736 aa18.77■□□□□ 0.6
PTPRU-210ENST00000527027 KIAA0753Q2KHM9 967 aa18.77■□□□□ 0.6
PTPRU-210ENST00000527027 TCTN1Q2MV58 587 aa18.77■□□□□ 0.6
PTPRU-210ENST00000527027 CWC27Q6UX04 472 aaKnown RBP18.77■□□□□ 0.6
PTPRU-210ENST00000527027 GDPD5Q8WTR4 605 aa18.77■□□□□ 0.6
PTPRU-210ENST00000527027 TGS1Q96RS0 853 aaKnown RBP18.77■□□□□ 0.6
PTPRU-210ENST00000527027 AMNQ9BXJ7 453 aa18.77■□□□□ 0.6
PTPRU-210ENST00000527027 ERVK-21P61565 698 aa18.76■□□□□ 0.59
PTPRU-210ENST00000527027 GHRHRQ02643 423 aa18.76■□□□□ 0.59
PTPRU-210ENST00000527027 TRIM71Q2Q1W2 868 aaKnown RBP18.76■□□□□ 0.59
PTPRU-210ENST00000527027 ZNF618Q5T7W0 954 aa18.76■□□□□ 0.59
PTPRU-210ENST00000527027 KCNV1Q6PIU1 500 aa18.76■□□□□ 0.59
PTPRU-210ENST00000527027 TRAF7Q6Q0C0 670 aa18.76■□□□□ 0.59
PTPRU-210ENST00000527027 SUGCTQ9HAC7 445 aa18.76■□□□□ 0.59
PTPRU-210ENST00000527027 MAP3K20Q9NYL2 800 aaKnown RBP18.76■□□□□ 0.59
PTPRU-210ENST00000527027 LINC01553A4QN01 128 aa18.75■□□□□ 0.59
PTPRU-210ENST00000527027 OPLAHO14841 1288 aa18.75■□□□□ 0.59
PTPRU-210ENST00000527027 ZNF286BP0CG31 522 aa18.75■□□□□ 0.59
PTPRU-210ENST00000527027 HOXD8P13378 290 aaPredicted RBP18.75■□□□□ 0.59
PTPRU-210ENST00000527027 ZNF200P98182 395 aaPredicted RBP18.75■□□□□ 0.59
PTPRU-210ENST00000527027 IMMTQ16891 758 aaKnown RBP18.75■□□□□ 0.59
PTPRU-210ENST00000527027 MYSM1Q5VVJ2 828 aa18.75■□□□□ 0.59
PTPRU-210ENST00000527027 B4GALNT3Q6L9W6 998 aa18.75■□□□□ 0.59
PTPRU-210ENST00000527027 STOX1Q6ZVD7 989 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms