RNA–Protein interactions for RNA: ENST00000526991.2

CHMP1B-201, Transcript of charged multivesicular body protein 1B, humanhuman

APPRIS P1 BASIC

Gene CHMP1B, Length 3,054 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-201ENST00000526991 SHMT1P34896 483 aa13.33□□□□□ -0.27
CHMP1B-201ENST00000526991 USH1GQ495M9 461 aa13.33□□□□□ -0.27
CHMP1B-201ENST00000526991 RBM26Q5T8P6 1007 aaKnown RBP13.33□□□□□ -0.27
CHMP1B-201ENST00000526991 SLC30A10Q6XR72 485 aa13.33□□□□□ -0.27
CHMP1B-201ENST00000526991 SLF2Q8IX21 1173 aa13.33□□□□□ -0.27
CHMP1B-201ENST00000526991 CDK5RAP3Q96JB5 506 aa13.33□□□□□ -0.27
CHMP1B-201ENST00000526991 PYM1Q9BRP8 204 aaKnown RBP13.33□□□□□ -0.27
CHMP1B-201ENST00000526991 MMTAG2Q9BU76 263 aaKnown RBP13.33□□□□□ -0.27
CHMP1B-201ENST00000526991 MMRN2Q9H8L6 949 aa13.33□□□□□ -0.27
CHMP1B-201ENST00000526991 POLD4Q9HCU8 107 aa13.33□□□□□ -0.27
CHMP1B-201ENST00000526991 RGS17Q9UGC6 210 aaPredicted RBP13.33□□□□□ -0.27
CHMP1B-201ENST00000526991 KIAA1551Q9HCM1 1747 aa13.33□□□□□ -0.27
CHMP1B-201ENST00000526991 RHOBTB3O94955 611 aa13.33□□□□□ -0.28
CHMP1B-201ENST00000526991 MATR3P43243 847 aaKnown RBP eCLIP13.33□□□□□ -0.28
CHMP1B-201ENST00000526991 SEPT2Q15019 361 aa13.33□□□□□ -0.28
CHMP1B-201ENST00000526991 MIGA2Q7L4E1 593 aa13.33□□□□□ -0.28
CHMP1B-201ENST00000526991 KIAA0895Q8NCT3 520 aa13.33□□□□□ -0.28
CHMP1B-201ENST00000526991 ZNF507Q8TCN5 953 aa13.33□□□□□ -0.28
CHMP1B-201ENST00000526991 PRMT6Q96LA8 375 aaPredicted RBP13.33□□□□□ -0.28
CHMP1B-201ENST00000526991 MMS19Q96T76 1030 aa13.33□□□□□ -0.28
CHMP1B-201ENST00000526991 ZMYND12Q9H0C1 365 aa13.33□□□□□ -0.28
CHMP1B-201ENST00000526991 PLEKHA4Q9H4M7 779 aa13.33□□□□□ -0.28
CHMP1B-201ENST00000526991 VEZTQ9HBM0 779 aa13.33□□□□□ -0.28
CHMP1B-201ENST00000526991 VPS18Q9P253 973 aa13.33□□□□□ -0.28
CHMP1B-201ENST00000526991 LRWD1Q9UFC0 647 aa13.33□□□□□ -0.28
CHMP1B-201ENST00000526991 GAKO14976 1311 aa13.33□□□□□ -0.28
CHMP1B-201ENST00000526991 ZNF831Q5JPB2 1677 aa13.33□□□□□ -0.28
CHMP1B-201ENST00000526991 KLRG2A4D1S0 409 aaPredicted RBP13.33□□□□□ -0.28
CHMP1B-201ENST00000526991 CCDC102AQ96A19 550 aa13.33□□□□□ -0.28
CHMP1B-201ENST00000526991 TANGO6Q9C0B7 1094 aa13.33□□□□□ -0.28
CHMP1B-201ENST00000526991 CCSER1Q9C0I3 900 aa13.33□□□□□ -0.28
CHMP1B-201ENST00000526991 SEMA6BQ9H3T3 888 aa13.33□□□□□ -0.28
CHMP1B-201ENST00000526991 NHEJ1Q9H9Q4 299 aaPredicted RBP13.33□□□□□ -0.28
CHMP1B-201ENST00000526991 ZNF287Q9HBT7 754 aa13.33□□□□□ -0.28
CHMP1B-201ENST00000526991 SHTN1A0MZ66 631 aa13.32□□□□□ -0.28
CHMP1B-201ENST00000526991 MYMKA6NI61 221 aa13.32□□□□□ -0.28
CHMP1B-201ENST00000526991 USP17L15C9J2P7 530 aa13.32□□□□□ -0.28
CHMP1B-201ENST00000526991 USP17L13C9JLJ4 530 aa13.32□□□□□ -0.28
CHMP1B-201ENST00000526991 USP17L11C9JVI0 530 aa13.32□□□□□ -0.28
CHMP1B-201ENST00000526991 USP17L18D6R9N7 530 aa13.32□□□□□ -0.28
CHMP1B-201ENST00000526991 USP17L22D6RA61 530 aa13.32□□□□□ -0.28
CHMP1B-201ENST00000526991 USP17L17D6RBQ6 530 aa13.32□□□□□ -0.28
CHMP1B-201ENST00000526991 USP17L19D6RCP7 530 aa13.32□□□□□ -0.28
CHMP1B-201ENST00000526991 USP17L20D6RJB6 530 aa13.32□□□□□ -0.28
CHMP1B-201ENST00000526991 MYH1P12882 1939 aa13.32□□□□□ -0.28
CHMP1B-201ENST00000526991 LMAN1P49257 510 aa13.32□□□□□ -0.28
CHMP1B-201ENST00000526991 JAG1P78504 1218 aa13.32□□□□□ -0.28
CHMP1B-201ENST00000526991 USP17L24Q0WX57 530 aa13.32□□□□□ -0.28
CHMP1B-201ENST00000526991 SLC15A2Q16348 729 aa13.32□□□□□ -0.28
CHMP1B-201ENST00000526991 CALCRLQ16602 461 aa13.32□□□□□ -0.28
CHMP1B-201ENST00000526991 USP17L6PQ6QN14 398 aa13.32□□□□□ -0.28
CHMP1B-201ENST00000526991 KCNK18Q7Z418 384 aa13.32□□□□□ -0.28
CHMP1B-201ENST00000526991 EGFL6Q8IUX8 553 aa13.32□□□□□ -0.28
CHMP1B-201ENST00000526991 ANKRD31Q8N7Z5 1873 aa13.32□□□□□ -0.28
CHMP1B-201ENST00000526991 CAGE1Q8TC20 777 aa13.32□□□□□ -0.28
CHMP1B-201ENST00000526991 JAKMIP2Q96AA8 810 aa13.32□□□□□ -0.28
CHMP1B-201ENST00000526991 ZHX3Q9H4I2 956 aa13.32□□□□□ -0.28
CHMP1B-201ENST00000526991 JADE2Q9NQC1 790 aa13.32□□□□□ -0.28
CHMP1B-201ENST00000526991 SMARCAL1Q9NZC9 954 aa13.32□□□□□ -0.28
CHMP1B-201ENST00000526991 ATF5Q9Y2D1 282 aaPredicted RBP13.32□□□□□ -0.28
CHMP1B-201ENST00000526991 APBA1Q02410 837 aa13.32□□□□□ -0.28
CHMP1B-201ENST00000526991 KCTD19Q17RG1 926 aaPredicted RBP13.32□□□□□ -0.28
CHMP1B-201ENST00000526991 C15orf52Q6ZUT6 534 aaKnown RBP13.32□□□□□ -0.28
CHMP1B-201ENST00000526991 KRT25Q7Z3Z0 450 aa13.32□□□□□ -0.28
CHMP1B-201ENST00000526991 CALML4Q96GE6 196 aa13.32□□□□□ -0.28
CHMP1B-201ENST00000526991 ZNHIT6Q9NWK9 470 aaKnown RBP13.32□□□□□ -0.28
CHMP1B-201ENST00000526991 YDJCA8MPS7 323 aa13.31□□□□□ -0.28
CHMP1B-201ENST00000526991 GNA11P29992 359 aa13.31□□□□□ -0.28
CHMP1B-201ENST00000526991 CXCR5P32302 372 aa13.31□□□□□ -0.28
CHMP1B-201ENST00000526991 BEND6Q5SZJ8 279 aaPredicted RBP13.31□□□□□ -0.28
CHMP1B-201ENST00000526991 SH3BP5LQ7L8J4 393 aa13.31□□□□□ -0.28
CHMP1B-201ENST00000526991 CCDC47Q96A33 483 aaKnown RBP13.31□□□□□ -0.28
CHMP1B-201ENST00000526991 CAPN11Q9UMQ6 739 aa13.31□□□□□ -0.28
CHMP1B-201ENST00000526991 SLX4Q8IY92 1834 aa13.31□□□□□ -0.28
CHMP1B-201ENST00000526991 CCDC151A5D8V7 595 aa13.31□□□□□ -0.28
CHMP1B-201ENST00000526991 CCNE1P24864 410 aa13.31□□□□□ -0.28
CHMP1B-201ENST00000526991 EEF1GP26641 437 aaKnown RBP13.31□□□□□ -0.28
CHMP1B-201ENST00000526991 DNM2P50570 870 aa13.31□□□□□ -0.28
CHMP1B-201ENST00000526991 HNRNPH2P55795 449 aaKnown RBP13.31□□□□□ -0.28
CHMP1B-201ENST00000526991 ADGRF4Q8IZF3 695 aa13.31□□□□□ -0.28
CHMP1B-201ENST00000526991 THAP9Q9H5L6 903 aa13.31□□□□□ -0.28
CHMP1B-201ENST00000526991 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.31□□□□□ -0.28
CHMP1B-201ENST00000526991 FAM198AQ9UFP1 575 aa13.31□□□□□ -0.28
CHMP1B-201ENST00000526991 SCN9AQ15858 1988 aa13.31□□□□□ -0.28
CHMP1B-201ENST00000526991 PPP1R11O60927 126 aaPredicted RBP13.31□□□□□ -0.28
CHMP1B-201ENST00000526991 IPO7O95373 1038 aaKnown RBP13.31□□□□□ -0.28
CHMP1B-201ENST00000526991 HLA-DOAP06340 250 aa13.31□□□□□ -0.28
CHMP1B-201ENST00000526991 EEF2P13639 858 aaKnown RBP13.31□□□□□ -0.28
CHMP1B-201ENST00000526991 GRB10Q13322 594 aa13.31□□□□□ -0.28
CHMP1B-201ENST00000526991 TRIM14Q14142 442 aa13.31□□□□□ -0.28
CHMP1B-201ENST00000526991 KCNB1Q14721 858 aa13.31□□□□□ -0.28
CHMP1B-201ENST00000526991 SV2BQ7L1I2 683 aa13.31□□□□□ -0.28
CHMP1B-201ENST00000526991 NELFCDQ8IXH7 590 aa13.31□□□□□ -0.28
CHMP1B-201ENST00000526991 SNX29Q8TEQ0 813 aa13.31□□□□□ -0.28
CHMP1B-201ENST00000526991 ANKS1AQ92625 1134 aa13.31□□□□□ -0.28
CHMP1B-201ENST00000526991 CRACR2AQ9BSW2 395 aa13.31□□□□□ -0.28
CHMP1B-201ENST00000526991 MLXIPQ9HAP2 919 aa13.31□□□□□ -0.28
CHMP1B-201ENST00000526991 NAV1Q8NEY1 1877 aa13.31□□□□□ -0.28
CHMP1B-201ENST00000526991 CYP2C19P33261 490 aa13.3□□□□□ -0.28
CHMP1B-201ENST00000526991 ARID5AQ03989 594 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms