RNA–Protein interactions for RNA: ENST00000526869.1

SMCO4-203, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 1 (best)

Gene SMCO4, Length 374 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-203ENST00000526869 TRIML1Q8N9V2 468 aa23.11■■□□□ 1.29
SMCO4-203ENST00000526869 RNF214Q8ND24 703 aa23.11■■□□□ 1.29
SMCO4-203ENST00000526869 CHST13Q8NET6 341 aa23.11■■□□□ 1.29
SMCO4-203ENST00000526869 CALML4Q96GE6 196 aa23.11■■□□□ 1.29
SMCO4-203ENST00000526869 MMTAG2Q9BU76 263 aaKnown RBP23.11■■□□□ 1.29
SMCO4-203ENST00000526869 HOMER2Q9NSB8 354 aa23.11■■□□□ 1.29
SMCO4-203ENST00000526869 COL20A1Q9P218 1284 aa23.11■■□□□ 1.29
SMCO4-203ENST00000526869 GJA5P36382 358 aa23.1■■□□□ 1.29
SMCO4-203ENST00000526869 SARSP49591 514 aaKnown RBP23.1■■□□□ 1.29
SMCO4-203ENST00000526869 RPS6P62753 249 aaKnown RBP23.1■■□□□ 1.29
SMCO4-203ENST00000526869 CEP55Q53EZ4 464 aa23.1■■□□□ 1.29
SMCO4-203ENST00000526869 XRRA1Q6P2D8 792 aa23.1■■□□□ 1.29
SMCO4-203ENST00000526869 RASSF8Q8NHQ8 419 aa23.1■■□□□ 1.29
SMCO4-203ENST00000526869 SMARCE1Q969G3 411 aa23.1■■□□□ 1.29
SMCO4-203ENST00000526869 NAT10Q9H0A0 1025 aaKnown RBP23.1■■□□□ 1.29
SMCO4-203ENST00000526869 ACAD9Q9H845 621 aa23.1■■□□□ 1.29
SMCO4-203ENST00000526869 ZNF408Q9H9D4 720 aa23.1■■□□□ 1.29
SMCO4-203ENST00000526869 NMRK2Q9NPI5 230 aa23.1■■□□□ 1.29
SMCO4-203ENST00000526869 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.1■■□□□ 1.29
SMCO4-203ENST00000526869 STK17AQ9UEE5 414 aa23.1■■□□□ 1.29
SMCO4-203ENST00000526869 RIPK3Q9Y572 518 aa23.1■■□□□ 1.29
SMCO4-203ENST00000526869 PCDHA5Q9Y5H7 936 aa23.1■■□□□ 1.29
SMCO4-203ENST00000526869 FOXN1O15353 648 aa23.09■■□□□ 1.29
SMCO4-203ENST00000526869 GTPBP6O43824 516 aaPredicted RBP23.09■■□□□ 1.29
SMCO4-203ENST00000526869 BCRP11274 1271 aa23.09■■□□□ 1.29
SMCO4-203ENST00000526869 OSBPP22059 807 aa23.09■■□□□ 1.29
SMCO4-203ENST00000526869 CDC25AP30304 524 aa23.09■■□□□ 1.29
SMCO4-203ENST00000526869 ZNF165P49910 485 aa23.09■■□□□ 1.29
SMCO4-203ENST00000526869 NAALADL2Q58DX5 795 aa23.09■■□□□ 1.29
SMCO4-203ENST00000526869 KRT79Q5XKE5 535 aa23.09■■□□□ 1.29
SMCO4-203ENST00000526869 PCNX4Q63HM2 1172 aa23.09■■□□□ 1.29
SMCO4-203ENST00000526869 RIOX2Q8IUF8 465 aa23.09■■□□□ 1.29
SMCO4-203ENST00000526869 ERCC4Q92889 916 aaPredicted RBP23.09■■□□□ 1.29
SMCO4-203ENST00000526869 BPIFA3Q9BQP9 254 aa23.09■■□□□ 1.29
SMCO4-203ENST00000526869 ASCC2Q9H1I8 757 aaPredicted RBP23.09■■□□□ 1.29
SMCO4-203ENST00000526869 DNAJC25Q9H1X3 360 aa23.09■■□□□ 1.29
SMCO4-203ENST00000526869 FBXO40Q9UH90 709 aa23.09■■□□□ 1.29
SMCO4-203ENST00000526869 KDM3AQ9Y4C1 1321 aa23.08■■□□□ 1.29
SMCO4-203ENST00000526869 MEIS1O00470 390 aa23.08■■□□□ 1.29
SMCO4-203ENST00000526869 MSH4O15457 936 aa23.08■■□□□ 1.29
SMCO4-203ENST00000526869 PRR29P0C7W0 189 aa23.08■■□□□ 1.29
SMCO4-203ENST00000526869 PLCG1P19174 1290 aa23.08■■□□□ 1.29
SMCO4-203ENST00000526869 COPB2P35606 906 aa23.08■■□□□ 1.29
SMCO4-203ENST00000526869 HERVK_113P62684 666 aa23.08■■□□□ 1.29
SMCO4-203ENST00000526869 SEMA3FQ13275 785 aa23.08■■□□□ 1.29
SMCO4-203ENST00000526869 HYIQ5T013 277 aa23.08■■□□□ 1.29
SMCO4-203ENST00000526869 GPAT2Q6NUI2 795 aa23.08■■□□□ 1.29
SMCO4-203ENST00000526869 SLC30A10Q6XR72 485 aa23.08■■□□□ 1.29
SMCO4-203ENST00000526869 ANP32BQ92688 251 aaKnown RBP23.08■■□□□ 1.29
SMCO4-203ENST00000526869 CBX8Q9HC52 389 aa23.08■■□□□ 1.29
SMCO4-203ENST00000526869 SLC45A1Q9Y2W3 748 aa23.08■■□□□ 1.29
SMCO4-203ENST00000526869 POTEMA6NI47 508 aa23.07■■□□□ 1.28
SMCO4-203ENST00000526869 FMR1Q06787 632 aaKnown RBP eCLIP23.07■■□□□ 1.28
SMCO4-203ENST00000526869 SPIRE1Q08AE8 756 aa23.07■■□□□ 1.28
SMCO4-203ENST00000526869 DPYDQ12882 1025 aa23.07■■□□□ 1.28
SMCO4-203ENST00000526869 CHADLQ6NUI6 762 aa23.07■■□□□ 1.28
SMCO4-203ENST00000526869 NSMFQ6X4W1 530 aa23.07■■□□□ 1.28
SMCO4-203ENST00000526869 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.07■■□□□ 1.28
SMCO4-203ENST00000526869 PLA2G4DQ86XP0 818 aa23.07■■□□□ 1.28
SMCO4-203ENST00000526869 SNX29Q8TEQ0 813 aa23.07■■□□□ 1.28
SMCO4-203ENST00000526869 GTF3C2Q8WUA4 911 aaPredicted RBP23.07■■□□□ 1.28
SMCO4-203ENST00000526869 SLC5A5Q92911 643 aa23.07■■□□□ 1.28
SMCO4-203ENST00000526869 GSDMAQ96QA5 445 aa23.07■■□□□ 1.28
SMCO4-203ENST00000526869 MXRA8Q9BRK3 442 aa23.07■■□□□ 1.28
SMCO4-203ENST00000526869 CELF2O95319 508 aaKnown RBP23.06■■□□□ 1.28
SMCO4-203ENST00000526869 CETPP11597 493 aa23.06■■□□□ 1.28
SMCO4-203ENST00000526869 GTF2A2P52657 109 aa23.06■■□□□ 1.28
SMCO4-203ENST00000526869 GRB10Q13322 594 aa23.06■■□□□ 1.28
SMCO4-203ENST00000526869 BAATQ14032 418 aaPredicted RBP23.06■■□□□ 1.28
SMCO4-203ENST00000526869 TMEM119Q4V9L6 283 aa23.06■■□□□ 1.28
SMCO4-203ENST00000526869 C11orf57Q6ZUT1 292 aaPredicted RBP23.06■■□□□ 1.28
SMCO4-203ENST00000526869 GRAMD1CQ8IYS0 662 aa23.06■■□□□ 1.28
SMCO4-203ENST00000526869 CDK5RAP3Q96JB5 506 aa23.06■■□□□ 1.28
SMCO4-203ENST00000526869 NT5C3AQ9H0P0 336 aa23.06■■□□□ 1.28
SMCO4-203ENST00000526869 PXMP2Q9NR77 195 aa23.06■■□□□ 1.28
SMCO4-203ENST00000526869 KBTBD4Q9NVX7 518 aa23.06■■□□□ 1.28
SMCO4-203ENST00000526869 MAN1B1Q9UKM7 699 aa23.06■■□□□ 1.28
SMCO4-203ENST00000526869 UBIAD1Q9Y5Z9 338 aa23.06■■□□□ 1.28
SMCO4-203ENST00000526869 TRPM7Q96QT4 1865 aa23.05■■□□□ 1.28
SMCO4-203ENST00000526869 AFMP43652 599 aa23.05■■□□□ 1.28
SMCO4-203ENST00000526869 MORC3Q14149 939 aa23.05■■□□□ 1.28
SMCO4-203ENST00000526869 PLS1Q14651 629 aa23.05■■□□□ 1.28
SMCO4-203ENST00000526869 DPCR1Q3MIW9 517 aa23.05■■□□□ 1.28
SMCO4-203ENST00000526869 HAUS3Q68CZ6 603 aa23.05■■□□□ 1.28
SMCO4-203ENST00000526869 POTEEQ6S8J3 1075 aa23.05■■□□□ 1.28
SMCO4-203ENST00000526869 KCTD17Q8N5Z5 321 aa23.05■■□□□ 1.28
SMCO4-203ENST00000526869 PNMA5Q96PV4 448 aa23.05■■□□□ 1.28
SMCO4-203ENST00000526869 TAAR1Q96RJ0 339 aa23.05■■□□□ 1.28
SMCO4-203ENST00000526869 RMDN3Q96TC7 470 aa23.05■■□□□ 1.28
SMCO4-203ENST00000526869 SPATC1LQ9H0A9 340 aa23.05■■□□□ 1.28
SMCO4-203ENST00000526869 CYP39A1Q9NYL5 469 aa23.05■■□□□ 1.28
SMCO4-203ENST00000526869 BTBD7Q9P203 1132 aa23.05■■□□□ 1.28
SMCO4-203ENST00000526869 VAV3Q9UKW4 847 aa23.05■■□□□ 1.28
SMCO4-203ENST00000526869 PNMA3Q9UL41 463 aa23.05■■□□□ 1.28
SMCO4-203ENST00000526869 PFASO15067 1338 aa23.05■■□□□ 1.28
SMCO4-203ENST00000526869 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.04■■□□□ 1.28
SMCO4-203ENST00000526869 BIN1O00499 593 aa23.04■■□□□ 1.28
SMCO4-203ENST00000526869 ITGBL1O95965 494 aaPredicted RBP23.04■■□□□ 1.28
SMCO4-203ENST00000526869 ZBTB48P10074 688 aaPredicted RBP23.04■■□□□ 1.28
SMCO4-203ENST00000526869 IQCB1Q15051 598 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms