RNA–Protein interactions for RNA: ENST00000526506.5

HIF3A-210, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-210ENST00000526506 SLC26A6Q9BXS9 759 aa17.31■□□□□ 0.36
HIF3A-210ENST00000526506 RIC8AQ9NPQ8 531 aa17.31■□□□□ 0.36
HIF3A-210ENST00000526506 GTF3C3Q9Y5Q9 886 aa17.31■□□□□ 0.36
HIF3A-210ENST00000526506 SPDYE3A6NKU9 549 aa17.3■□□□□ 0.36
HIF3A-210ENST00000526506 H0YGN5 161 aa17.3■□□□□ 0.36
HIF3A-210ENST00000526506 ZEB2O60315 1214 aa17.3■□□□□ 0.36
HIF3A-210ENST00000526506 ARIH2O95376 493 aa17.3■□□□□ 0.36
HIF3A-210ENST00000526506 ASGR1P07306 291 aa17.3■□□□□ 0.36
HIF3A-210ENST00000526506 ADCY7P51828 1080 aa17.3■□□□□ 0.36
HIF3A-210ENST00000526506 BEX3Q00994 111 aa17.3■□□□□ 0.36
HIF3A-210ENST00000526506 UBE2SQ16763 222 aa17.3■□□□□ 0.36
HIF3A-210ENST00000526506 CCDC62Q6P9F0 684 aa17.3■□□□□ 0.36
HIF3A-210ENST00000526506 SLC39A5Q6ZMH5 540 aa17.3■□□□□ 0.36
HIF3A-210ENST00000526506 TRIM22Q8IYM9 498 aa17.3■□□□□ 0.36
HIF3A-210ENST00000526506 C7orf61Q8IZ16 206 aa17.3■□□□□ 0.36
HIF3A-210ENST00000526506 OR6J1Q8NGC5 347 aa17.3■□□□□ 0.36
HIF3A-210ENST00000526506 TPCN1Q9ULQ1 816 aa17.3■□□□□ 0.36
HIF3A-210ENST00000526506 MRVI1Q9Y6F6 885 aa17.3■□□□□ 0.36
HIF3A-210ENST00000526506 SMCO2A6NFE2 343 aa17.29■□□□□ 0.36
HIF3A-210ENST00000526506 PPFIA3O75145 1194 aa17.29■□□□□ 0.36
HIF3A-210ENST00000526506 STAM2O75886 525 aa17.29■□□□□ 0.36
HIF3A-210ENST00000526506 SNX17Q15036 470 aa17.29■□□□□ 0.36
HIF3A-210ENST00000526506 PKN1Q16512 942 aa17.29■□□□□ 0.36
HIF3A-210ENST00000526506 C1orf53Q5VUE5 145 aa17.29■□□□□ 0.36
HIF3A-210ENST00000526506 XRRA1Q6P2D8 792 aa17.29■□□□□ 0.36
HIF3A-210ENST00000526506 CCDC12Q8WUD4 166 aaPredicted RBP17.29■□□□□ 0.36
HIF3A-210ENST00000526506 GLT1D1Q96MS3 346 aa17.29■□□□□ 0.36
HIF3A-210ENST00000526506 C22orf23Q9BZE7 217 aa17.29■□□□□ 0.36
HIF3A-210ENST00000526506 GLT8D2Q9H1C3 349 aa17.29■□□□□ 0.36
HIF3A-210ENST00000526506 SLKQ9H2G2 1235 aaPredicted RBP17.29■□□□□ 0.36
HIF3A-210ENST00000526506 STARD7Q9NQZ5 370 aa17.29■□□□□ 0.36
HIF3A-210ENST00000526506 ALPK3Q96L96 1907 aa17.29■□□□□ 0.36
HIF3A-210ENST00000526506 ELP1O95163 1332 aa17.28■□□□□ 0.36
HIF3A-210ENST00000526506 ESYT2A0FGR8 921 aa17.28■□□□□ 0.36
HIF3A-210ENST00000526506 PFKFB2O60825 505 aa17.28■□□□□ 0.36
HIF3A-210ENST00000526506 RGS20O76081 388 aa17.28■□□□□ 0.36
HIF3A-210ENST00000526506 CPT1AP50416 773 aa17.28■□□□□ 0.36
HIF3A-210ENST00000526506 RTP1P59025 263 aa17.28■□□□□ 0.36
HIF3A-210ENST00000526506 LY6KQ17RY6 165 aa17.28■□□□□ 0.36
HIF3A-210ENST00000526506 GNPTABQ3T906 1256 aa17.28■□□□□ 0.36
HIF3A-210ENST00000526506 BRDTQ58F21 947 aaPredicted RBP17.28■□□□□ 0.36
HIF3A-210ENST00000526506 PCNX4Q63HM2 1172 aa17.28■□□□□ 0.36
HIF3A-210ENST00000526506 KCNV1Q6PIU1 500 aa17.28■□□□□ 0.36
HIF3A-210ENST00000526506 COPS5Q92905 334 aa17.28■□□□□ 0.36
HIF3A-210ENST00000526506 EHMT1Q9H9B1 1298 aa17.28■□□□□ 0.36
HIF3A-210ENST00000526506 UPF2Q9HAU5 1272 aaKnown RBP17.28■□□□□ 0.36
HIF3A-210ENST00000526506 DDX41Q9UJV9 622 aaKnown RBP17.28■□□□□ 0.36
HIF3A-210ENST00000526506 ATP11BQ9Y2G3 1177 aa17.28■□□□□ 0.36
HIF3A-210ENST00000526506 CABYRO75952 493 aa17.27■□□□□ 0.36
HIF3A-210ENST00000526506 CDKL5O76039 1030 aa17.27■□□□□ 0.36
HIF3A-210ENST00000526506 GH1P01241 217 aa17.27■□□□□ 0.36
HIF3A-210ENST00000526506 MRPS9P82933 396 aaKnown RBP17.27■□□□□ 0.36
HIF3A-210ENST00000526506 SSRP1Q08945 709 aaKnown RBP17.27■□□□□ 0.36
HIF3A-210ENST00000526506 SCRN1Q12765 414 aa17.27■□□□□ 0.36
HIF3A-210ENST00000526506 CXCL17Q6UXB2 119 aa17.27■□□□□ 0.36
HIF3A-210ENST00000526506 VTI1AQ96AJ9 217 aa17.27■□□□□ 0.36
HIF3A-210ENST00000526506 ZFP91Q96JP5 570 aaPredicted RBP17.27■□□□□ 0.36
HIF3A-210ENST00000526506 INPP4AQ96PE3 977 aaPredicted RBP17.27■□□□□ 0.36
HIF3A-210ENST00000526506 ZMYND12Q9H0C1 365 aa17.27■□□□□ 0.36
HIF3A-210ENST00000526506 PCDHA6Q9UN73 950 aa17.27■□□□□ 0.36
HIF3A-210ENST00000526506 PCDHA8Q9Y5H6 950 aa17.27■□□□□ 0.36
HIF3A-210ENST00000526506 KIAA1217Q5T5P2 1943 aa17.26■□□□□ 0.35
HIF3A-210ENST00000526506 A6NJR5 290 aa17.26■□□□□ 0.35
HIF3A-210ENST00000526506 DEXIO95424 95 aa17.26■□□□□ 0.35
HIF3A-210ENST00000526506 FOSP01100 380 aaPredicted RBP17.26■□□□□ 0.35
HIF3A-210ENST00000526506 TGFB3P10600 412 aa17.26■□□□□ 0.35
HIF3A-210ENST00000526506 RBM25P49756 843 aaKnown RBP17.26■□□□□ 0.35
HIF3A-210ENST00000526506 ARHGAP1Q07960 439 aa17.26■□□□□ 0.35
HIF3A-210ENST00000526506 AP3B2Q13367 1082 aa17.26■□□□□ 0.35
HIF3A-210ENST00000526506 TRIM60Q495X7 471 aa17.26■□□□□ 0.35
HIF3A-210ENST00000526506 CCDC148Q8NFR7 591 aa17.26■□□□□ 0.35
HIF3A-210ENST00000526506 C6orf50Q9HD87 102 aa17.26■□□□□ 0.35
HIF3A-210ENST00000526506 POLR3EQ9NVU0 708 aa17.26■□□□□ 0.35
HIF3A-210ENST00000526506 A0A0U1RQG5 324 aaPredicted RBP17.25■□□□□ 0.35
HIF3A-210ENST00000526506 GNA11P29992 359 aa17.25■□□□□ 0.35
HIF3A-210ENST00000526506 EMID1Q96A84 441 aaPredicted RBP17.25■□□□□ 0.35
HIF3A-210ENST00000526506 KIF2CQ99661 725 aa17.25■□□□□ 0.35
HIF3A-210ENST00000526506 SH3GLB2Q9NR46 395 aa17.25■□□□□ 0.35
HIF3A-210ENST00000526506 RTEL1Q9NZ71 1219 aa17.25■□□□□ 0.35
HIF3A-210ENST00000526506 ZMYND8Q9ULU4 1186 aaPredicted RBP17.25■□□□□ 0.35
HIF3A-210ENST00000526506 SPATA31C2B4DYI2 1134 aa17.24■□□□□ 0.35
HIF3A-210ENST00000526506 FIBPO43427 364 aa17.24■□□□□ 0.35
HIF3A-210ENST00000526506 KPNA6O60684 536 aa17.24■□□□□ 0.35
HIF3A-210ENST00000526506 MYL3P08590 195 aa17.24■□□□□ 0.35
HIF3A-210ENST00000526506 UBA1P22314 1058 aaKnown RBP17.24■□□□□ 0.35
HIF3A-210ENST00000526506 ICAM3P32942 547 aa17.24■□□□□ 0.35
HIF3A-210ENST00000526506 CLK2P49760 499 aaKnown RBP17.24■□□□□ 0.35
HIF3A-210ENST00000526506 PURAQ00577 322 aaKnown RBP17.24■□□□□ 0.35
HIF3A-210ENST00000526506 LAMC2Q13753 1193 aa17.24■□□□□ 0.35
HIF3A-210ENST00000526506 ME3Q16798 604 aa17.24■□□□□ 0.35
HIF3A-210ENST00000526506 MCTP2Q6DN12 878 aa17.24■□□□□ 0.35
HIF3A-210ENST00000526506 NLRX1Q86UT6 975 aa17.24■□□□□ 0.35
HIF3A-210ENST00000526506 DHX37Q8IY37 1157 aaKnown RBP17.24■□□□□ 0.35
HIF3A-210ENST00000526506 REXO1Q8N1G1 1221 aaKnown RBP17.24■□□□□ 0.35
HIF3A-210ENST00000526506 AFG1LQ8WV93 481 aa17.24■□□□□ 0.35
HIF3A-210ENST00000526506 ANO3Q9BYT9 981 aa17.24■□□□□ 0.35
HIF3A-210ENST00000526506 TMEM260Q9NX78 707 aa17.24■□□□□ 0.35
HIF3A-210ENST00000526506 VPS54Q9P1Q0 977 aa17.24■□□□□ 0.35
HIF3A-210ENST00000526506 CEP290O15078 2479 aa17.24■□□□□ 0.35
HIF3A-210ENST00000526506 MROH7Q68CQ1 1323 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms