RNA–Protein interactions for RNA: ENST00000525990.1

SSBP3-210, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-210ENST00000525990 CREB3L3Q68CJ9 461 aa13.99□□□□□ -0.17
SSBP3-210ENST00000525990 MYLIPQ8WY64 445 aa13.99□□□□□ -0.17
SSBP3-210ENST00000525990 CDX2Q99626 313 aaPredicted RBP13.99□□□□□ -0.17
SSBP3-210ENST00000525990 PDCD2LQ9BRP1 358 aa13.99□□□□□ -0.17
SSBP3-210ENST00000525990 DDX41Q9UJV9 622 aaKnown RBP13.99□□□□□ -0.17
SSBP3-210ENST00000525990 PNMA6FA0A0J9YX94 578 aa13.98□□□□□ -0.17
SSBP3-210ENST00000525990 GH1P01241 217 aa13.98□□□□□ -0.17
SSBP3-210ENST00000525990 DNAJB2P25686 324 aa13.98□□□□□ -0.17
SSBP3-210ENST00000525990 PGM5Q15124 567 aa13.98□□□□□ -0.17
SSBP3-210ENST00000525990 CENPQQ7L2Z9 268 aaPredicted RBP13.98□□□□□ -0.17
SSBP3-210ENST00000525990 OTOP2Q7RTS6 562 aa13.98□□□□□ -0.17
SSBP3-210ENST00000525990 CATIPQ7Z7H3 387 aa13.98□□□□□ -0.17
SSBP3-210ENST00000525990 FCHSD1Q86WN1 690 aa13.98□□□□□ -0.17
SSBP3-210ENST00000525990 SLC17A8Q8NDX2 589 aa13.98□□□□□ -0.17
SSBP3-210ENST00000525990 KAT2BQ92831 832 aa13.98□□□□□ -0.17
SSBP3-210ENST00000525990 IWS1Q96ST2 819 aa13.98□□□□□ -0.17
SSBP3-210ENST00000525990 BCAS3Q9H6U6 928 aa13.98□□□□□ -0.17
SSBP3-210ENST00000525990 IL23AQ9NPF7 189 aa13.98□□□□□ -0.17
SSBP3-210ENST00000525990 MRVI1Q9Y6F6 885 aa13.98□□□□□ -0.17
SSBP3-210ENST00000525990 EYSQ5T1H1 3165 aa13.98□□□□□ -0.17
SSBP3-210ENST00000525990 hCG_1642624A0A1W2PR95 340 aa13.97□□□□□ -0.17
SSBP3-210ENST00000525990 B4DLN1 442 aa13.97□□□□□ -0.17
SSBP3-210ENST00000525990 ZNF286BP0CG31 522 aa13.97□□□□□ -0.17
SSBP3-210ENST00000525990 MRPL12P52815 198 aaKnown RBP13.97□□□□□ -0.17
SSBP3-210ENST00000525990 SP2Q02086 613 aa13.97□□□□□ -0.17
SSBP3-210ENST00000525990 BMP2KLQ5H9B9 411 aa13.97□□□□□ -0.17
SSBP3-210ENST00000525990 CASC1Q6TDU7 716 aa13.97□□□□□ -0.17
SSBP3-210ENST00000525990 TCEANC2Q96MN5 208 aa13.97□□□□□ -0.17
SSBP3-210ENST00000525990 CTAGE1Q96RT6 745 aa13.97□□□□□ -0.17
SSBP3-210ENST00000525990 PBX4Q9BYU1 374 aa13.97□□□□□ -0.17
SSBP3-210ENST00000525990 MAF1Q9H063 256 aa13.97□□□□□ -0.17
SSBP3-210ENST00000525990 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.96□□□□□ -0.17
SSBP3-210ENST00000525990 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.96□□□□□ -0.17
SSBP3-210ENST00000525990 GCOM1H8Y6P7 765 aaPredicted RBP13.96□□□□□ -0.17
SSBP3-210ENST00000525990 EIF3JO75822 258 aaKnown RBP13.96□□□□□ -0.17
SSBP3-210ENST00000525990 DDAH1O94760 285 aa13.96□□□□□ -0.17
SSBP3-210ENST00000525990 POLR2MP0CAP2 368 aa13.96□□□□□ -0.17
SSBP3-210ENST00000525990 MCM5P33992 734 aa13.96□□□□□ -0.17
SSBP3-210ENST00000525990 PSRC1Q6PGN9 363 aaPredicted RBP13.96□□□□□ -0.17
SSBP3-210ENST00000525990 NFXL1Q6ZNB6 911 aa13.96□□□□□ -0.17
SSBP3-210ENST00000525990 DEFB128Q7Z7B8 93 aa13.96□□□□□ -0.17
SSBP3-210ENST00000525990 SRBD1Q8N5C6 995 aaKnown RBP13.96□□□□□ -0.17
SSBP3-210ENST00000525990 TELO2Q9Y4R8 837 aa13.96□□□□□ -0.17
SSBP3-210ENST00000525990 UBA1P22314 1058 aaKnown RBP13.95□□□□□ -0.18
SSBP3-210ENST00000525990 MRPS9P82933 396 aaKnown RBP13.95□□□□□ -0.18
SSBP3-210ENST00000525990 GRIN2CQ14957 1233 aa13.95□□□□□ -0.18
SSBP3-210ENST00000525990 ADCK5Q3MIX3 580 aa13.95□□□□□ -0.18
SSBP3-210ENST00000525990 BRDTQ58F21 947 aaPredicted RBP13.95□□□□□ -0.18
SSBP3-210ENST00000525990 GDF6Q6KF10 455 aaPredicted RBP13.95□□□□□ -0.18
SSBP3-210ENST00000525990 NFRKBQ6P4R8 1299 aa13.95□□□□□ -0.18
SSBP3-210ENST00000525990 USP17L6PQ6QN14 398 aa13.95□□□□□ -0.18
SSBP3-210ENST00000525990 VSIG10LQ86VR7 867 aa13.95□□□□□ -0.18
SSBP3-210ENST00000525990 RASEFQ8IZ41 740 aa13.95□□□□□ -0.18
SSBP3-210ENST00000525990 CCDC82Q8N4S0 544 aa13.95□□□□□ -0.18
SSBP3-210ENST00000525990 CTCFLQ8NI51 663 aaPredicted RBP13.95□□□□□ -0.18
SSBP3-210ENST00000525990 HERVK_113Q902F9 699 aa13.95□□□□□ -0.18
SSBP3-210ENST00000525990 SPZ1Q9BXG8 430 aa13.95□□□□□ -0.18
SSBP3-210ENST00000525990 SIP14410 1827 aa13.94□□□□□ -0.18
SSBP3-210ENST00000525990 FRMPD4Q14CM0 1322 aa13.94□□□□□ -0.18
SSBP3-210ENST00000525990 CCDC69A6NI79 296 aa13.94□□□□□ -0.18
SSBP3-210ENST00000525990 KPNA6O60684 536 aa13.94□□□□□ -0.18
SSBP3-210ENST00000525990 GGPS1O95749 300 aa13.94□□□□□ -0.18
SSBP3-210ENST00000525990 FGBP02675 491 aa13.94□□□□□ -0.18
SSBP3-210ENST00000525990 RABGGTBP53611 331 aa13.94□□□□□ -0.18
SSBP3-210ENST00000525990 SEMA3FQ13275 785 aa13.94□□□□□ -0.18
SSBP3-210ENST00000525990 HIC1Q14526 733 aa13.94□□□□□ -0.18
SSBP3-210ENST00000525990 HSDL1Q3SXM5 330 aa13.94□□□□□ -0.18
SSBP3-210ENST00000525990 MICU3Q86XE3 530 aa13.94□□□□□ -0.18
SSBP3-210ENST00000525990 DHX37Q8IY37 1157 aaKnown RBP13.94□□□□□ -0.18
SSBP3-210ENST00000525990 DHX38Q92620 1227 aaKnown RBP13.94□□□□□ -0.18
SSBP3-210ENST00000525990 TIFAQ96CG3 184 aa13.94□□□□□ -0.18
SSBP3-210ENST00000525990 TMEM87BQ96K49 555 aa13.94□□□□□ -0.18
SSBP3-210ENST00000525990 MAP3K14Q99558 947 aa13.94□□□□□ -0.18
SSBP3-210ENST00000525990 ALG1Q9BT22 464 aa13.94□□□□□ -0.18
SSBP3-210ENST00000525990 SEZ6LQ9BYH1 1024 aa13.94□□□□□ -0.18
SSBP3-210ENST00000525990 YBX2Q9Y2T7 364 aaKnown RBP13.94□□□□□ -0.18
SSBP3-210ENST00000525990 MYO9BQ13459 2157 aa13.93□□□□□ -0.18
SSBP3-210ENST00000525990 MEIS2O14770 477 aa13.93□□□□□ -0.18
SSBP3-210ENST00000525990 SUPT20HL2P0C7V6 817 aa13.93□□□□□ -0.18
SSBP3-210ENST00000525990 CPA1P15085 419 aa13.93□□□□□ -0.18
SSBP3-210ENST00000525990 MYOGP15173 224 aa13.93□□□□□ -0.18
SSBP3-210ENST00000525990 CCND2P30279 289 aa13.93□□□□□ -0.18
SSBP3-210ENST00000525990 LIFRP42702 1097 aa13.93□□□□□ -0.18
SSBP3-210ENST00000525990 PSEN2P49810 448 aa13.93□□□□□ -0.18
SSBP3-210ENST00000525990 ZNF200P98182 395 aaPredicted RBP13.93□□□□□ -0.18
SSBP3-210ENST00000525990 PTGISQ16647 500 aa13.93□□□□□ -0.18
SSBP3-210ENST00000525990 CELF3Q5SZQ8 465 aaKnown RBP13.93□□□□□ -0.18
SSBP3-210ENST00000525990 MYSM1Q5VVJ2 828 aa13.93□□□□□ -0.18
SSBP3-210ENST00000525990 PPTC7Q8NI37 304 aa13.93□□□□□ -0.18
SSBP3-210ENST00000525990 WNT8BQ93098 351 aa13.93□□□□□ -0.18
SSBP3-210ENST00000525990 EMID1Q96A84 441 aaPredicted RBP13.93□□□□□ -0.18
SSBP3-210ENST00000525990 RRP36Q96EU6 259 aaKnown RBP13.93□□□□□ -0.18
SSBP3-210ENST00000525990 ZNF576Q9H609 170 aa13.93□□□□□ -0.18
SSBP3-210ENST00000525990 MAP3K20Q9NYL2 800 aaKnown RBP13.93□□□□□ -0.18
SSBP3-210ENST00000525990 RTEL1Q9NZ71 1219 aa13.93□□□□□ -0.18
SSBP3-210ENST00000525990 HDAC6Q9UBN7 1215 aa13.93□□□□□ -0.18
SSBP3-210ENST00000525990 COL4A4P53420 1690 aaPredicted RBP13.92□□□□□ -0.18
SSBP3-210ENST00000525990 ZBBXA8MT70 800 aa13.92□□□□□ -0.18
SSBP3-210ENST00000525990 HAS3O00219 553 aa13.92□□□□□ -0.18
SSBP3-210ENST00000525990 CDC45O75419 566 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms