RNA–Protein interactions for RNA: ENST00000525506.1

RBBP4-216, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

TSL 2

Gene RBBP4, Length 501 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-216ENST00000525506 TEX2Q8IWB9 1127 aa12.11□□□□□ -0.47
RBBP4-216ENST00000525506 ZFP91Q96JP5 570 aaPredicted RBP12.11□□□□□ -0.47
RBBP4-216ENST00000525506 GUCD1Q96NT3 240 aa12.11□□□□□ -0.47
RBBP4-216ENST00000525506 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.11□□□□□ -0.477e-7■■□□□ 13.4
RBBP4-216ENST00000525506 LRRC2Q9BYS8 371 aa12.11□□□□□ -0.47
RBBP4-216ENST00000525506 PXMP2Q9NR77 195 aa12.11□□□□□ -0.47
RBBP4-216ENST00000525506 SNX14Q9Y5W7 946 aa12.11□□□□□ -0.47
RBBP4-216ENST00000525506 PNMA6FA0A0J9YX94 578 aa12.1□□□□□ -0.47
RBBP4-216ENST00000525506 B4DLN1 442 aa12.1□□□□□ -0.47
RBBP4-216ENST00000525506 NKRFO15226 690 aaKnown RBP eCLIP12.1□□□□□ -0.47
RBBP4-216ENST00000525506 SORBS3O60504 671 aa12.1□□□□□ -0.47
RBBP4-216ENST00000525506 NR3C2P08235 984 aa12.1□□□□□ -0.47
RBBP4-216ENST00000525506 MYCLP12524 364 aaPredicted RBP12.1□□□□□ -0.47
RBBP4-216ENST00000525506 CPT1AP50416 773 aa12.1□□□□□ -0.47
RBBP4-216ENST00000525506 MRPL12P52815 198 aaKnown RBP12.1□□□□□ -0.47
RBBP4-216ENST00000525506 CCL23P55773 120 aa12.1□□□□□ -0.47
RBBP4-216ENST00000525506 TTLL4Q14679 1199 aa12.1□□□□□ -0.47
RBBP4-216ENST00000525506 STXBP2Q15833 593 aa12.1□□□□□ -0.47
RBBP4-216ENST00000525506 NBPF20Q3BBV1 942 aa12.1□□□□□ -0.47
RBBP4-216ENST00000525506 TMEM240Q5SV17 173 aa12.1□□□□□ -0.47
RBBP4-216ENST00000525506 FAM109BQ6ICB4 259 aaPredicted RBP12.1□□□□□ -0.47
RBBP4-216ENST00000525506 APOA5Q6Q788 366 aa12.1□□□□□ -0.47
RBBP4-216ENST00000525506 BLOC1S2Q6QNY1 142 aa12.1□□□□□ -0.47
RBBP4-216ENST00000525506 SYNE3Q6ZMZ3 975 aa12.1□□□□□ -0.47
RBBP4-216ENST00000525506 IL31RAQ8NI17 732 aa12.1□□□□□ -0.47
RBBP4-216ENST00000525506 AFG1LQ8WV93 481 aa12.1□□□□□ -0.47
RBBP4-216ENST00000525506 USP26Q9BXU7 913 aa12.1□□□□□ -0.47
RBBP4-216ENST00000525506 AGXT2Q9BYV1 514 aa12.1□□□□□ -0.47
RBBP4-216ENST00000525506 TM6SF1Q9BZW5 370 aa12.1□□□□□ -0.47
RBBP4-216ENST00000525506 ALDH8A1Q9H2A2 487 aaPredicted RBP12.1□□□□□ -0.47
RBBP4-216ENST00000525506 HIPK3Q9H422 1215 aa12.1□□□□□ -0.47
RBBP4-216ENST00000525506 TRMT13Q9NUP7 481 aaKnown RBP12.1□□□□□ -0.47
RBBP4-216ENST00000525506 POLR3EQ9NVU0 708 aa12.1□□□□□ -0.47
RBBP4-216ENST00000525506 RBM28Q9NW13 759 aaKnown RBP12.1□□□□□ -0.47
RBBP4-216ENST00000525506 A6NJR5 290 aa12.09□□□□□ -0.47
RBBP4-216ENST00000525506 RBAK-RBAKDNI3L0D1 243 aa12.09□□□□□ -0.47
RBBP4-216ENST00000525506 CYP2C9P11712 490 aa12.09□□□□□ -0.47
RBBP4-216ENST00000525506 RXRAP19793 462 aa12.09□□□□□ -0.47
RBBP4-216ENST00000525506 ANAPC15P60006 121 aa12.09□□□□□ -0.47
RBBP4-216ENST00000525506 PPIGQ13427 754 aaKnown RBP eCLIP12.09□□□□□ -0.47
RBBP4-216ENST00000525506 FAM47CQ5HY64 1035 aa12.09□□□□□ -0.47
RBBP4-216ENST00000525506 ZNF697Q5TEC3 545 aa12.09□□□□□ -0.47
RBBP4-216ENST00000525506 ZNF365Q70YC5 407 aa12.09□□□□□ -0.47
RBBP4-216ENST00000525506 FCHSD1Q86WN1 690 aa12.09□□□□□ -0.47
RBBP4-216ENST00000525506 CMTR1Q8N1G2 835 aaKnown RBP12.09□□□□□ -0.47
RBBP4-216ENST00000525506 TMEM199Q8N511 208 aa12.09□□□□□ -0.47
RBBP4-216ENST00000525506 FANCBQ8NB91 859 aa12.09□□□□□ -0.47
RBBP4-216ENST00000525506 TET1Q8NFU7 2136 aa12.09□□□□□ -0.47
RBBP4-216ENST00000525506 IL17RAQ96F46 866 aa12.09□□□□□ -0.47
RBBP4-216ENST00000525506 JAKMIP1Q96N16 626 aaKnown RBP12.09□□□□□ -0.47
RBBP4-216ENST00000525506 IWS1Q96ST2 819 aa12.09□□□□□ -0.47
RBBP4-216ENST00000525506 MTG1Q9BT17 334 aaPredicted RBP12.09□□□□□ -0.47
RBBP4-216ENST00000525506 NOC4LQ9BVI4 516 aaKnown RBP12.09□□□□□ -0.47
RBBP4-216ENST00000525506 WNT8AQ9H1J5 351 aa12.09□□□□□ -0.47
RBBP4-216ENST00000525506 GRXCR1A8MXD5 290 aa12.08□□□□□ -0.48
RBBP4-216ENST00000525506 PLEKHA8P1O95397 391 aa12.08□□□□□ -0.48
RBBP4-216ENST00000525506 GH1P01241 217 aa12.08□□□□□ -0.48
RBBP4-216ENST00000525506 RPS6KB1P23443 525 aa12.08□□□□□ -0.48
RBBP4-216ENST00000525506 EVCP57679 992 aa12.08□□□□□ -0.48
RBBP4-216ENST00000525506 SMAD3P84022 425 aaKnown RBP12.08□□□□□ -0.48
RBBP4-216ENST00000525506 ARHGAP1Q07960 439 aa12.08□□□□□ -0.48
RBBP4-216ENST00000525506 BRDTQ58F21 947 aaPredicted RBP12.08□□□□□ -0.48
RBBP4-216ENST00000525506 TMTC3Q6ZXV5 915 aa12.08□□□□□ -0.48
RBBP4-216ENST00000525506 MICU3Q86XE3 530 aa12.08□□□□□ -0.48
RBBP4-216ENST00000525506 GPKOWQ92917 476 aaPredicted RBP eCLIP12.08□□□□□ -0.48
RBBP4-216ENST00000525506 RRP36Q96EU6 259 aaKnown RBP12.08□□□□□ -0.48
RBBP4-216ENST00000525506 SCLYQ96I15 445 aa12.08□□□□□ -0.48
RBBP4-216ENST00000525506 PDCD2LQ9BRP1 358 aa12.08□□□□□ -0.48
RBBP4-216ENST00000525506 TTYH1Q9H313 450 aaPredicted RBP12.08□□□□□ -0.48
RBBP4-216ENST00000525506 SEMA6BQ9H3T3 888 aa12.08□□□□□ -0.48
RBBP4-216ENST00000525506 SEC63Q9UGP8 760 aaKnown RBP12.08□□□□□ -0.48
RBBP4-216ENST00000525506 DDX41Q9UJV9 622 aaKnown RBP12.08□□□□□ -0.48
RBBP4-216ENST00000525506 STXBP5LQ9Y2K9 1186 aa12.08□□□□□ -0.48
RBBP4-216ENST00000525506 CCDC196A0A1B0GTZ2 297 aa12.07□□□□□ -0.48
RBBP4-216ENST00000525506 hCG_1642624A0A1W2PR95 340 aa12.07□□□□□ -0.48
RBBP4-216ENST00000525506 GCOM1H8Y6P7 765 aaPredicted RBP12.07□□□□□ -0.48
RBBP4-216ENST00000525506 ZBTB43O43298 467 aa12.07□□□□□ -0.48
RBBP4-216ENST00000525506 EIF3JO75822 258 aaKnown RBP12.07□□□□□ -0.48
RBBP4-216ENST00000525506 RGS20O76081 388 aa12.07□□□□□ -0.48
RBBP4-216ENST00000525506 MMP3P08254 477 aa12.07□□□□□ -0.48
RBBP4-216ENST00000525506 POLR2MP0CAP2 368 aa12.07□□□□□ -0.48
RBBP4-216ENST00000525506 PGM5Q15124 567 aa12.07□□□□□ -0.48
RBBP4-216ENST00000525506 RUFY3Q7L099 469 aa12.07□□□□□ -0.48
RBBP4-216ENST00000525506 SRBD1Q8N5C6 995 aaKnown RBP12.07□□□□□ -0.48
RBBP4-216ENST00000525506 SLC17A8Q8NDX2 589 aa12.07□□□□□ -0.48
RBBP4-216ENST00000525506 VWCEQ96DN2 955 aa12.07□□□□□ -0.48
RBBP4-216ENST00000525506 TCEANC2Q96MN5 208 aa12.07□□□□□ -0.48
RBBP4-216ENST00000525506 ZSWIM6Q9HCJ5 1215 aa12.07□□□□□ -0.48
RBBP4-216ENST00000525506 IL23AQ9NPF7 189 aa12.07□□□□□ -0.48
RBBP4-216ENST00000525506 CXXC1Q9P0U4 656 aaPredicted RBP12.07□□□□□ -0.48
RBBP4-216ENST00000525506 MRVI1Q9Y6F6 885 aa12.07□□□□□ -0.48
RBBP4-216ENST00000525506 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.06□□□□□ -0.48
RBBP4-216ENST00000525506 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.06□□□□□ -0.48
RBBP4-216ENST00000525506 hCG_1984214I3L0E3 225 aa12.06□□□□□ -0.48
RBBP4-216ENST00000525506 PIK3CDO00329 1044 aa12.06□□□□□ -0.48
RBBP4-216ENST00000525506 KPNA6O60684 536 aa12.06□□□□□ -0.48
RBBP4-216ENST00000525506 CASTP20810 708 aaKnown RBP12.06□□□□□ -0.48
RBBP4-216ENST00000525506 PBX2P40425 430 aa12.06□□□□□ -0.48
RBBP4-216ENST00000525506 FGD1P98174 961 aa12.06□□□□□ -0.48
RBBP4-216ENST00000525506 RTN1Q16799 776 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms