RNA–Protein interactions for RNA: ENST00000525214.1

COPB1-203, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-203ENST00000525214 SLC6A11P48066 632 aa8.31□□□□□ -1.08
COPB1-203ENST00000525214 DLX2Q07687 328 aaPredicted RBP8.31□□□□□ -1.08
COPB1-203ENST00000525214 CACNB2Q08289 660 aaPredicted RBP8.31□□□□□ -1.08
COPB1-203ENST00000525214 MAP4K2Q12851 820 aa8.31□□□□□ -1.08
COPB1-203ENST00000525214 CEP68Q76N32 757 aa8.31□□□□□ -1.08
COPB1-203ENST00000525214 SMARCC2Q8TAQ2 1214 aa8.31□□□□□ -1.08
COPB1-203ENST00000525214 NOX5Q96PH1 765 aa8.31□□□□□ -1.08
COPB1-203ENST00000525214 IER2Q9BTL4 223 aa8.31□□□□□ -1.08
COPB1-203ENST00000525214 DLX3O60479 287 aa8.3□□□□□ -1.08
COPB1-203ENST00000525214 GTF2A2P52657 109 aa8.3□□□□□ -1.08
COPB1-203ENST00000525214 MROH9Q5TGP6 573 aa8.3□□□□□ -1.08
COPB1-203ENST00000525214 SAPCD2Q86UD0 394 aa8.3□□□□□ -1.08
COPB1-203ENST00000525214 ADGRG2Q8IZP9 1017 aa8.3□□□□□ -1.08
COPB1-203ENST00000525214 NLGN1Q8N2Q7 840 aa8.3□□□□□ -1.08
COPB1-203ENST00000525214 SYT8Q8NBV8 401 aa8.3□□□□□ -1.08
COPB1-203ENST00000525214 KRTAP4-7Q9BYR0 210 aa8.3□□□□□ -1.08
COPB1-203ENST00000525214 ARHGEF4Q9NR80 690 aa8.3□□□□□ -1.08
COPB1-203ENST00000525214 A0A1B0GTL3 188 aa8.29□□□□□ -1.08
COPB1-203ENST00000525214 MYO1BO43795 1136 aa8.29□□□□□ -1.08
COPB1-203ENST00000525214 C8BP07358 591 aa8.29□□□□□ -1.08
COPB1-203ENST00000525214 MIB1Q86YT6 1006 aa8.29□□□□□ -1.08
COPB1-203ENST00000525214 FEZF2Q8TBJ5 459 aa8.29□□□□□ -1.08
COPB1-203ENST00000525214 ZNF526Q8TF50 670 aaPredicted RBP8.29□□□□□ -1.08
COPB1-203ENST00000525214 KCTD13Q8WZ19 329 aa8.29□□□□□ -1.08
COPB1-203ENST00000525214 SEC14L1Q92503 715 aa8.29□□□□□ -1.08
COPB1-203ENST00000525214 TRMT2BQ96GJ1 504 aaKnown RBP8.29□□□□□ -1.08
COPB1-203ENST00000525214 TMEM169Q96HH4 297 aa8.29□□□□□ -1.08
COPB1-203ENST00000525214 SGSM3Q96HU1 749 aa8.29□□□□□ -1.08
COPB1-203ENST00000525214 SYT3Q9BQG1 590 aa8.29□□□□□ -1.08
COPB1-203ENST00000525214 AP5M1Q9H0R1 490 aa8.29□□□□□ -1.08
COPB1-203ENST00000525214 PALD1Q9ULE6 856 aa8.29□□□□□ -1.08
COPB1-203ENST00000525214 PCDHA2Q9Y5H9 948 aa8.29□□□□□ -1.08
COPB1-203ENST00000525214 OTOL1A6NHN0 477 aaPredicted RBP8.28□□□□□ -1.08
COPB1-203ENST00000525214 STK10O94804 968 aaKnown RBP8.28□□□□□ -1.08
COPB1-203ENST00000525214 ST13P5Q8NFI4 369 aaPredicted RBP8.28□□□□□ -1.08
COPB1-203ENST00000525214 CDIP1Q9H305 208 aa8.28□□□□□ -1.08
COPB1-203ENST00000525214 LUC7LQ9NQ29 371 aaKnown RBP8.28□□□□□ -1.08
COPB1-203ENST00000525214 MSRB2Q9Y3D2 182 aa8.28□□□□□ -1.08
COPB1-203ENST00000525214 SH3D21A4FU49 640 aa8.27□□□□□ -1.09
COPB1-203ENST00000525214 CTSWP56202 376 aa8.27□□□□□ -1.09
COPB1-203ENST00000525214 LSAMPQ13449 338 aa8.27□□□□□ -1.09
COPB1-203ENST00000525214 HSP90AA2PQ14568 343 aaPredicted RBP8.27□□□□□ -1.09
COPB1-203ENST00000525214 LIPIQ6XZB0 460 aa8.27□□□□□ -1.09
COPB1-203ENST00000525214 SP8Q8IXZ3 490 aa8.27□□□□□ -1.09
COPB1-203ENST00000525214 FAM26EQ8N5C1 309 aa8.27□□□□□ -1.09
COPB1-203ENST00000525214 DDX11Q96FC9 970 aa8.27□□□□□ -1.09
COPB1-203ENST00000525214 AARSD1Q9BTE6 412 aaKnown RBP8.27□□□□□ -1.09
COPB1-203ENST00000525214 H7BY64 318 aa8.26□□□□□ -1.09
COPB1-203ENST00000525214 MSCO60682 206 aa8.26□□□□□ -1.09
COPB1-203ENST00000525214 SASH1O94885 1247 aa8.26□□□□□ -1.09
COPB1-203ENST00000525214 SLURP1P55000 103 aa8.26□□□□□ -1.09
COPB1-203ENST00000525214 ETV3LQ6ZN32 361 aa8.26□□□□□ -1.09
COPB1-203ENST00000525214 CKAP2LQ8IYA6 745 aa8.26□□□□□ -1.09
COPB1-203ENST00000525214 OSBP2Q969R2 916 aa8.26□□□□□ -1.09
COPB1-203ENST00000525214 C8orf37Q96NL8 207 aa8.26□□□□□ -1.09
COPB1-203ENST00000525214 TRIM55Q9BYV6 548 aa8.26□□□□□ -1.09
COPB1-203ENST00000525214 SPATA6Q9NWH7 488 aaPredicted RBP8.26□□□□□ -1.09
COPB1-203ENST00000525214 FGFR1P11362 822 aa8.25□□□□□ -1.09
COPB1-203ENST00000525214 NTRK3Q16288 839 aa8.25□□□□□ -1.09
COPB1-203ENST00000525214 USP53Q70EK8 1073 aa8.25□□□□□ -1.09
COPB1-203ENST00000525214 MILR1Q7Z6M3 343 aa8.25□□□□□ -1.09
COPB1-203ENST00000525214 GORASP1Q9BQQ3 440 aa8.25□□□□□ -1.09
COPB1-203ENST00000525214 TANGO6Q9C0B7 1094 aa8.25□□□□□ -1.09
COPB1-203ENST00000525214 GPR27Q9NS67 375 aa8.25□□□□□ -1.09
COPB1-203ENST00000525214 CLDND1Q9NY35 253 aa8.25□□□□□ -1.09
COPB1-203ENST00000525214 COA3Q9Y2R0 106 aaPredicted RBP8.25□□□□□ -1.09
COPB1-203ENST00000525214 IQCA1LA6NCM1 817 aa8.24□□□□□ -1.09
COPB1-203ENST00000525214 PRODHO43272 600 aa8.24□□□□□ -1.09
COPB1-203ENST00000525214 CYP2C8P10632 490 aa8.24□□□□□ -1.09
COPB1-203ENST00000525214 EMC4Q5J8M3 183 aa8.24□□□□□ -1.09
COPB1-203ENST00000525214 YOD1Q5VVQ6 348 aaPredicted RBP8.24□□□□□ -1.09
COPB1-203ENST00000525214 FAM126BQ8IXS8 530 aa8.24□□□□□ -1.09
COPB1-203ENST00000525214 ZDHHC14Q8IZN3 488 aa8.24□□□□□ -1.09
COPB1-203ENST00000525214 LINC00482Q8N8I6 264 aa8.24□□□□□ -1.09
COPB1-203ENST00000525214 CHAMP1Q96JM3 812 aa8.24□□□□□ -1.09
COPB1-203ENST00000525214 SPATA25Q9BR10 227 aa8.24□□□□□ -1.09
COPB1-203ENST00000525214 PHF20Q9BVI0 1012 aa8.24□□□□□ -1.09
COPB1-203ENST00000525214 RTEL1Q9NZ71 1219 aa8.24□□□□□ -1.09
COPB1-203ENST00000525214 PPARGC1AQ9UBK2 798 aaKnown RBP8.24□□□□□ -1.09
COPB1-203ENST00000525214 ZNF652Q9Y2D9 606 aa8.24□□□□□ -1.09
COPB1-203ENST00000525214 TADA3O75528 432 aa8.23□□□□□ -1.09
COPB1-203ENST00000525214 PABPC1P11940 636 aaKnown RBP8.23□□□□□ -1.09
COPB1-203ENST00000525214 SPATC1Q76KD6 591 aa8.23□□□□□ -1.09
COPB1-203ENST00000525214 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.23□□□□□ -1.09
COPB1-203ENST00000525214 ZNF669Q96BR6 464 aaPredicted RBP8.23□□□□□ -1.09
COPB1-203ENST00000525214 ZBTB8AQ96BR9 441 aa8.23□□□□□ -1.09
COPB1-203ENST00000525214 ATP2B1P20020 1258 aa8.22□□□□□ -1.09
COPB1-203ENST00000525214 STAT5AP42229 794 aa8.22□□□□□ -1.09
COPB1-203ENST00000525214 KCNC1P48547 511 aa8.22□□□□□ -1.09
COPB1-203ENST00000525214 SMAD4Q13485 552 aaKnown RBP8.22□□□□□ -1.09
COPB1-203ENST00000525214 CR1LQ2VPA4 569 aa8.22□□□□□ -1.09
COPB1-203ENST00000525214 KCNT2Q6UVM3 1135 aa8.22□□□□□ -1.09
COPB1-203ENST00000525214 RSPO2Q6UXX9 243 aaPredicted RBP8.22□□□□□ -1.09
COPB1-203ENST00000525214 CD300LDQ6UXZ3 194 aa8.22□□□□□ -1.09
COPB1-203ENST00000525214 C11orf84Q9BUA3 381 aaPredicted RBP8.22□□□□□ -1.09
COPB1-203ENST00000525214 TRAV20A0A0B4J274 112 aa8.21□□□□□ -1.1
COPB1-203ENST00000525214 TCRBV5S2A0A599 114 aa8.21□□□□□ -1.1
COPB1-203ENST00000525214 BLACEA4D250 179 aa8.21□□□□□ -1.1
COPB1-203ENST00000525214 HGSO14964 777 aaPredicted RBP8.21□□□□□ -1.1
COPB1-203ENST00000525214 PDPK1O15530 556 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms