RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 ATN1P54259 1190 aaPredicted RBP5.26□□□□□ -1.57
CHMP4A-202ENST00000524955 ARHGAP4P98171 946 aa5.26□□□□□ -1.57
CHMP4A-202ENST00000524955 SP2Q02086 613 aa5.26□□□□□ -1.57
CHMP4A-202ENST00000524955 TRAF1Q13077 416 aa5.26□□□□□ -1.57
CHMP4A-202ENST00000524955 SEMA3FQ13275 785 aa5.26□□□□□ -1.57
CHMP4A-202ENST00000524955 TRIM29Q14134 588 aa5.26□□□□□ -1.57
CHMP4A-202ENST00000524955 NBR1Q14596 966 aa5.26□□□□□ -1.57
CHMP4A-202ENST00000524955 STXBP2Q15833 593 aa5.26□□□□□ -1.57
CHMP4A-202ENST00000524955 MCTP1Q6DN14 999 aa5.26□□□□□ -1.57
CHMP4A-202ENST00000524955 PPP1R18Q6NYC8 613 aa5.26□□□□□ -1.57
CHMP4A-202ENST00000524955 ZNF467Q7Z7K2 595 aaPredicted RBP5.26□□□□□ -1.57
CHMP4A-202ENST00000524955 VSIG10LQ86VR7 867 aa5.26□□□□□ -1.57
CHMP4A-202ENST00000524955 DIS3L2Q8IYB7 885 aaKnown RBP5.26□□□□□ -1.57
CHMP4A-202ENST00000524955 TRMT44Q8IYL2 757 aaKnown RBP5.26□□□□□ -1.57
CHMP4A-202ENST00000524955 REXO1Q8N1G1 1221 aaKnown RBP5.26□□□□□ -1.57
CHMP4A-202ENST00000524955 CCDC148Q8NFR7 591 aa5.26□□□□□ -1.57
CHMP4A-202ENST00000524955 MORC4Q8TE76 937 aa5.26□□□□□ -1.57
CHMP4A-202ENST00000524955 TBCKQ8TEA7 893 aa5.26□□□□□ -1.57
CHMP4A-202ENST00000524955 CCDC12Q8WUD4 166 aaPredicted RBP5.26□□□□□ -1.57
CHMP4A-202ENST00000524955 C8orf76Q96K31 380 aa5.26□□□□□ -1.57
CHMP4A-202ENST00000524955 ABHD16BQ9H3Z7 469 aa5.26□□□□□ -1.57
CHMP4A-202ENST00000524955 XPNPEP3Q9NQH7 507 aa5.26□□□□□ -1.57
CHMP4A-202ENST00000524955 PAK6Q9NQU5 681 aaPredicted RBP5.26□□□□□ -1.57
CHMP4A-202ENST00000524955 MRVI1Q9Y6F6 885 aa5.26□□□□□ -1.57
CHMP4A-202ENST00000524955 SMCHD1A6NHR9 2005 aa5.26□□□□□ -1.57
CHMP4A-202ENST00000524955 MGAMO43451 1857 aa5.26□□□□□ -1.57
CHMP4A-202ENST00000524955 SYNRGQ9UMZ2 1314 aa5.25□□□□□ -1.57
CHMP4A-202ENST00000524955 ESYT2A0FGR8 921 aa5.25□□□□□ -1.57
CHMP4A-202ENST00000524955 VPS37CA5D8V6 355 aaPredicted RBP5.25□□□□□ -1.57
CHMP4A-202ENST00000524955 FAM86B1E9PN63 330 aa5.25□□□□□ -1.57
CHMP4A-202ENST00000524955 hCG_1984214I3L0E3 225 aa5.25□□□□□ -1.57
CHMP4A-202ENST00000524955 M0R2N6 131 aa5.25□□□□□ -1.57
CHMP4A-202ENST00000524955 ATP9AO75110 1047 aa5.25□□□□□ -1.57
CHMP4A-202ENST00000524955 EIF3JO75822 258 aaKnown RBP5.25□□□□□ -1.57
CHMP4A-202ENST00000524955 GGPS1O95749 300 aa5.25□□□□□ -1.57
CHMP4A-202ENST00000524955 HSP90AA1P07900 732 aaKnown RBP5.25□□□□□ -1.57
CHMP4A-202ENST00000524955 GJB1P08034 283 aa5.25□□□□□ -1.57
CHMP4A-202ENST00000524955 MYL3P08590 195 aa5.25□□□□□ -1.57
CHMP4A-202ENST00000524955 FAM86B2P0C5J1 330 aa5.25□□□□□ -1.57
CHMP4A-202ENST00000524955 C6orf222P0C671 652 aaPredicted RBP5.25□□□□□ -1.57
CHMP4A-202ENST00000524955 RARBP10826 455 aa5.25□□□□□ -1.57
CHMP4A-202ENST00000524955 AKR1A1P14550 325 aa5.25□□□□□ -1.57
CHMP4A-202ENST00000524955 XBP1P17861 261 aa5.25□□□□□ -1.57
CHMP4A-202ENST00000524955 GNA11P29992 359 aa5.25□□□□□ -1.57
CHMP4A-202ENST00000524955 KRT2P35908 639 aa5.25□□□□□ -1.57
CHMP4A-202ENST00000524955 SREBF1P36956 1147 aa5.25□□□□□ -1.57
CHMP4A-202ENST00000524955 GJA8P48165 433 aa5.25□□□□□ -1.57
CHMP4A-202ENST00000524955 MCM2P49736 904 aa5.25□□□□□ -1.57
CHMP4A-202ENST00000524955 PSMC6P62333 389 aa5.25□□□□□ -1.57
CHMP4A-202ENST00000524955 HMGN5P82970 282 aaKnown RBP5.25□□□□□ -1.57
CHMP4A-202ENST00000524955 GHRHRQ02643 423 aa5.25□□□□□ -1.57
CHMP4A-202ENST00000524955 CUL4AQ13619 759 aa5.25□□□□□ -1.57
CHMP4A-202ENST00000524955 GNL2Q13823 731 aaKnown RBP5.25□□□□□ -1.57
CHMP4A-202ENST00000524955 NONOQ15233 471 aaKnown RBP eCLIP5.25□□□□□ -1.57
CHMP4A-202ENST00000524955 LRRC41Q15345 812 aa5.25□□□□□ -1.57
CHMP4A-202ENST00000524955 LETM2Q2VYF4 491 aa5.25□□□□□ -1.57
CHMP4A-202ENST00000524955 FOXD4L6Q3SYB3 417 aaPredicted RBP5.25□□□□□ -1.57
CHMP4A-202ENST00000524955 PRR16Q569H4 304 aa5.25□□□□□ -1.57
CHMP4A-202ENST00000524955 PCNX4Q63HM2 1172 aa5.25□□□□□ -1.57
CHMP4A-202ENST00000524955 LARP1BQ659C4 914 aaKnown RBP5.25□□□□□ -1.57
CHMP4A-202ENST00000524955 FAM173BQ6P4H8 233 aa5.25□□□□□ -1.57
CHMP4A-202ENST00000524955 FOXD4L3Q6VB84 417 aaPredicted RBP5.25□□□□□ -1.57
CHMP4A-202ENST00000524955 CYFIP1Q7L576 1253 aa5.25□□□□□ -1.57
CHMP4A-202ENST00000524955 TRMT1LQ7Z2T5 733 aaKnown RBP5.25□□□□□ -1.57
CHMP4A-202ENST00000524955 TLK2Q86UE8 772 aa5.25□□□□□ -1.57
CHMP4A-202ENST00000524955 FERMT3Q86UX7 667 aa5.25□□□□□ -1.57
CHMP4A-202ENST00000524955 DHX37Q8IY37 1157 aaKnown RBP5.25□□□□□ -1.57
CHMP4A-202ENST00000524955 ZNF713Q8N859 430 aaPredicted RBP5.25□□□□□ -1.57
CHMP4A-202ENST00000524955 OR6J1Q8NGC5 347 aa5.25□□□□□ -1.57
CHMP4A-202ENST00000524955 AFG1LQ8WV93 481 aa5.25□□□□□ -1.57
CHMP4A-202ENST00000524955 WASF1Q92558 559 aa5.25□□□□□ -1.57
CHMP4A-202ENST00000524955 SNX21Q969T3 373 aa5.25□□□□□ -1.57
CHMP4A-202ENST00000524955 PAWRQ96IZ0 340 aaKnown RBP5.25□□□□□ -1.57
CHMP4A-202ENST00000524955 CHAMP1Q96JM3 812 aa5.25□□□□□ -1.57
CHMP4A-202ENST00000524955 IWS1Q96ST2 819 aa5.25□□□□□ -1.57
CHMP4A-202ENST00000524955 MXRA8Q9BRK3 442 aa5.25□□□□□ -1.57
CHMP4A-202ENST00000524955 LLPHQ9BRT6 129 aaKnown RBP5.25□□□□□ -1.57
CHMP4A-202ENST00000524955 SENP6Q9GZR1 1112 aaPredicted RBP5.25□□□□□ -1.57
CHMP4A-202ENST00000524955 VTA1Q9NP79 307 aa5.25□□□□□ -1.57
CHMP4A-202ENST00000524955 SH3GLB2Q9NR46 395 aa5.25□□□□□ -1.57
CHMP4A-202ENST00000524955 RBM27Q9P2N5 1060 aaKnown RBP5.25□□□□□ -1.57
CHMP4A-202ENST00000524955 UBIAD1Q9Y5Z9 338 aa5.25□□□□□ -1.57
CHMP4A-202ENST00000524955 ZNF236Q9UL36 1845 aa5.25□□□□□ -1.57
CHMP4A-202ENST00000524955 FRMPD4Q14CM0 1322 aa5.24□□□□□ -1.57
CHMP4A-202ENST00000524955 BAZ2BQ9UIF8 2168 aaKnown RBP5.24□□□□□ -1.57
CHMP4A-202ENST00000524955 IGLV3-22A0A075B6J6 115 aa5.24□□□□□ -1.57
CHMP4A-202ENST00000524955 CCDC194A0A1B0GVG4 234 aa5.24□□□□□ -1.57
CHMP4A-202ENST00000524955 SPATA31C2B4DYI2 1134 aa5.24□□□□□ -1.57
CHMP4A-202ENST00000524955 H3BQV1 296 aa5.24□□□□□ -1.57
CHMP4A-202ENST00000524955 CTAGE5O15320 804 aa5.24□□□□□ -1.57
CHMP4A-202ENST00000524955 CHMP2AO43633 222 aa5.24□□□□□ -1.57
CHMP4A-202ENST00000524955 SLC37A4O43826 429 aa5.24□□□□□ -1.57
CHMP4A-202ENST00000524955 CCNT1O60563 726 aaKnown RBP5.24□□□□□ -1.57
CHMP4A-202ENST00000524955 ADAMTS4O75173 837 aa5.24□□□□□ -1.57
CHMP4A-202ENST00000524955 FOSP01100 380 aaPredicted RBP5.24□□□□□ -1.57
CHMP4A-202ENST00000524955 ZNF286BP0CG31 522 aa5.24□□□□□ -1.57
CHMP4A-202ENST00000524955 UBA1P22314 1058 aaKnown RBP5.24□□□□□ -1.57
CHMP4A-202ENST00000524955 MCM7P33993 719 aa5.24□□□□□ -1.57
CHMP4A-202ENST00000524955 MNX1P50219 401 aaPredicted RBP5.24□□□□□ -1.57
CHMP4A-202ENST00000524955 ARHGAP1Q07960 439 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms