RNA–Protein interactions for RNA: ENST00000524330.1

VPS13B-212, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 218 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-212ENST00000524330 GHRHRQ02643 423 aa11.18□□□□□ -0.62
VPS13B-212ENST00000524330 PPATQ06203 517 aa11.18□□□□□ -0.62
VPS13B-212ENST00000524330 PSMD2Q13200 908 aa11.18□□□□□ -0.62
VPS13B-212ENST00000524330 HYIQ5T013 277 aa11.18□□□□□ -0.62
VPS13B-212ENST00000524330 SPATA1Q5VX52 437 aa11.18□□□□□ -0.62
VPS13B-212ENST00000524330 CCDC84Q86UT8 332 aaPredicted RBP11.18□□□□□ -0.62
VPS13B-212ENST00000524330 PLA2G4DQ86XP0 818 aa11.18□□□□□ -0.62
VPS13B-212ENST00000524330 GRAMD1CQ8IYS0 662 aa11.18□□□□□ -0.62
VPS13B-212ENST00000524330 CPXCR1Q8N123 301 aa11.18□□□□□ -0.62
VPS13B-212ENST00000524330 MB21D1Q8N884 522 aa11.18□□□□□ -0.62
VPS13B-212ENST00000524330 NEK9Q8TD19 979 aa11.18□□□□□ -0.62
VPS13B-212ENST00000524330 RAD54LQ92698 747 aa11.18□□□□□ -0.62
VPS13B-212ENST00000524330 FBXO28Q9NVF7 368 aa11.18□□□□□ -0.62
VPS13B-212ENST00000524330 IMPACTQ9P2X3 320 aa11.18□□□□□ -0.62
VPS13B-212ENST00000524330 SCAF8Q9UPN6 1271 aaKnown RBP11.18□□□□□ -0.62
VPS13B-212ENST00000524330 MYH7BA7E2Y1 1941 aa11.17□□□□□ -0.62
VPS13B-212ENST00000524330 SYNRGQ9UMZ2 1314 aa11.17□□□□□ -0.62
VPS13B-212ENST00000524330 DCAF8L1A6NGE4 600 aa11.17□□□□□ -0.62
VPS13B-212ENST00000524330 PP2D1A8MPX8 630 aa11.17□□□□□ -0.62
VPS13B-212ENST00000524330 VWA5AO00534 786 aa11.17□□□□□ -0.62
VPS13B-212ENST00000524330 CXCL11O14625 94 aa11.17□□□□□ -0.62
VPS13B-212ENST00000524330 ATP2A1O14983 1001 aa11.17□□□□□ -0.62
VPS13B-212ENST00000524330 CDC25AP30304 524 aa11.17□□□□□ -0.62
VPS13B-212ENST00000524330 HMGCS2P54868 508 aa11.17□□□□□ -0.62
VPS13B-212ENST00000524330 PAK1Q13153 545 aa11.17□□□□□ -0.62
VPS13B-212ENST00000524330 CUL4BQ13620 913 aa11.17□□□□□ -0.62
VPS13B-212ENST00000524330 TMEM119Q4V9L6 283 aa11.17□□□□□ -0.62
VPS13B-212ENST00000524330 CEP55Q53EZ4 464 aa11.17□□□□□ -0.62
VPS13B-212ENST00000524330 RNF207Q6ZRF8 634 aa11.17□□□□□ -0.62
VPS13B-212ENST00000524330 CATSPERGQ6ZRH7 1159 aa11.17□□□□□ -0.62
VPS13B-212ENST00000524330 ERO1BQ86YB8 467 aa11.17□□□□□ -0.62
VPS13B-212ENST00000524330 FAM114A1Q8IWE2 563 aa11.17□□□□□ -0.62
VPS13B-212ENST00000524330 PROCA1Q8NCQ7 364 aaPredicted RBP11.17□□□□□ -0.62
VPS13B-212ENST00000524330 CRYGNQ8WXF5 182 aa11.17□□□□□ -0.62
VPS13B-212ENST00000524330 DHTKD1Q96HY7 919 aaPredicted RBP11.17□□□□□ -0.62
VPS13B-212ENST00000524330 TRERF1Q96PN7 1200 aa11.17□□□□□ -0.62
VPS13B-212ENST00000524330 MPHOSPH6Q99547 160 aaKnown RBP11.17□□□□□ -0.62
VPS13B-212ENST00000524330 TEKT3Q9BXF9 490 aa11.17□□□□□ -0.62
VPS13B-212ENST00000524330 RAVER2Q9HCJ3 691 aaKnown RBP11.17□□□□□ -0.62
VPS13B-212ENST00000524330 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.17□□□□□ -0.62
VPS13B-212ENST00000524330 FBXO40Q9UH90 709 aa11.17□□□□□ -0.62
VPS13B-212ENST00000524330 RWDD2AQ9UIY3 292 aa11.17□□□□□ -0.62
VPS13B-212ENST00000524330 DNM3Q9UQ16 869 aa11.17□□□□□ -0.62
VPS13B-212ENST00000524330 AFG3L2Q9Y4W6 797 aa11.17□□□□□ -0.62
VPS13B-212ENST00000524330 GAS7O60861 476 aa11.16□□□□□ -0.62
VPS13B-212ENST00000524330 RHOBTB3O94955 611 aa11.16□□□□□ -0.62
VPS13B-212ENST00000524330 KRT18P05783 430 aaKnown RBP11.16□□□□□ -0.62
VPS13B-212ENST00000524330 BCRP11274 1271 aa11.16□□□□□ -0.62
VPS13B-212ENST00000524330 UBASH3AP57075 661 aa11.16□□□□□ -0.62
VPS13B-212ENST00000524330 FANCCQ00597 558 aa11.16□□□□□ -0.62
VPS13B-212ENST00000524330 PDE4DQ08499 809 aa11.16□□□□□ -0.62
VPS13B-212ENST00000524330 GRB10Q13322 594 aa11.16□□□□□ -0.62
VPS13B-212ENST00000524330 LRCH2Q5VUJ6 765 aa11.16□□□□□ -0.62
VPS13B-212ENST00000524330 PRAMEF18Q5VWM3 479 aa11.16□□□□□ -0.62
VPS13B-212ENST00000524330 NCAPH2Q6IBW4 605 aa11.16□□□□□ -0.62
VPS13B-212ENST00000524330 UNC13DQ70J99 1090 aa11.16□□□□□ -0.62
VPS13B-212ENST00000524330 FASTKD5Q7L8L6 764 aaKnown RBP11.16□□□□□ -0.62
VPS13B-212ENST00000524330 CCDC65Q8IXS2 484 aa11.16□□□□□ -0.62
VPS13B-212ENST00000524330 ETNPPLQ8TBG4 499 aa11.16□□□□□ -0.62
VPS13B-212ENST00000524330 HAS1Q92839 578 aa11.16□□□□□ -0.62
VPS13B-212ENST00000524330 CDCA5Q96FF9 252 aa11.16□□□□□ -0.62
VPS13B-212ENST00000524330 AGBL1Q96MI9 1066 aa11.16□□□□□ -0.62
VPS13B-212ENST00000524330 RIT2Q99578 217 aa11.16□□□□□ -0.62
VPS13B-212ENST00000524330 MXRA8Q9BRK3 442 aa11.16□□□□□ -0.62
VPS13B-212ENST00000524330 ZNF577Q9BSK1 485 aa11.16□□□□□ -0.62
VPS13B-212ENST00000524330 POLR3CQ9BUI4 534 aaPredicted RBP11.16□□□□□ -0.62
VPS13B-212ENST00000524330 TEX13BQ9BXU2 312 aa11.16□□□□□ -0.62
VPS13B-212ENST00000524330 BLZF1Q9H2G9 400 aa11.16□□□□□ -0.62
VPS13B-212ENST00000524330 TUFT1Q9NNX1 390 aa11.16□□□□□ -0.62
VPS13B-212ENST00000524330 RNF146Q9NTX7 359 aa11.16□□□□□ -0.62
VPS13B-212ENST00000524330 MAGEC2Q9UBF1 373 aaPredicted RBP11.16□□□□□ -0.62
VPS13B-212ENST00000524330 ZKSCAN5Q9Y2L8 839 aa11.16□□□□□ -0.62
VPS13B-212ENST00000524330 NFE2L3Q9Y4A8 694 aa11.16□□□□□ -0.62
VPS13B-212ENST00000524330 SCN4AP35499 1836 aa11.16□□□□□ -0.62
VPS13B-212ENST00000524330 POTEMA6NI47 508 aa11.15□□□□□ -0.62
VPS13B-212ENST00000524330 OPLAHO14841 1288 aa11.15□□□□□ -0.62
VPS13B-212ENST00000524330 MAFGO15525 162 aa11.15□□□□□ -0.62
VPS13B-212ENST00000524330 STAM2O75886 525 aa11.15□□□□□ -0.62
VPS13B-212ENST00000524330 OSBPP22059 807 aa11.15□□□□□ -0.62
VPS13B-212ENST00000524330 RPA1P27694 616 aa11.15□□□□□ -0.62
VPS13B-212ENST00000524330 IRX3P78415 501 aaPredicted RBP11.15□□□□□ -0.62
VPS13B-212ENST00000524330 PRKG1Q13976 671 aa11.15□□□□□ -0.62
VPS13B-212ENST00000524330 VGLL4Q14135 290 aa11.15□□□□□ -0.62
VPS13B-212ENST00000524330 NCAPHQ15003 741 aa11.15□□□□□ -0.62
VPS13B-212ENST00000524330 KMT5BQ4FZB7 885 aa11.15□□□□□ -0.62
VPS13B-212ENST00000524330 COBLL1Q53SF7 1204 aa11.15□□□□□ -0.62
VPS13B-212ENST00000524330 EAPPQ56P03 285 aaPredicted RBP11.15□□□□□ -0.62
VPS13B-212ENST00000524330 NAALADL2Q58DX5 795 aa11.15□□□□□ -0.62
VPS13B-212ENST00000524330 ARHGEF16Q5VV41 709 aa11.15□□□□□ -0.62
VPS13B-212ENST00000524330 PCNX4Q63HM2 1172 aa11.15□□□□□ -0.62
VPS13B-212ENST00000524330 SNRNP48Q6IEG0 339 aaKnown RBP11.15□□□□□ -0.62
VPS13B-212ENST00000524330 KLHL10Q6JEL2 608 aa11.15□□□□□ -0.62
VPS13B-212ENST00000524330 NLRX1Q86UT6 975 aa11.15□□□□□ -0.62
VPS13B-212ENST00000524330 SPC24Q8NBT2 197 aa11.15□□□□□ -0.62
VPS13B-212ENST00000524330 CCDC150Q8NCX0 1101 aa11.15□□□□□ -0.62
VPS13B-212ENST00000524330 CHST13Q8NET6 341 aa11.15□□□□□ -0.62
VPS13B-212ENST00000524330 GTF3C2Q8WUA4 911 aaPredicted RBP11.15□□□□□ -0.62
VPS13B-212ENST00000524330 STAMQ92783 540 aa11.15□□□□□ -0.62
VPS13B-212ENST00000524330 ATG4CQ96DT6 458 aa11.15□□□□□ -0.62
VPS13B-212ENST00000524330 CDHR1Q96JP9 859 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms