RNA–Protein interactions for RNA: ENST00000524288.1

SKP1-213, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-213ENST00000524288 ASXL2Q76L83 1435 aa8.14□□□□□ -1.11
SKP1-213ENST00000524288 RFXAPO00287 272 aa8.14□□□□□ -1.11
SKP1-213ENST00000524288 RASGRP1O95267 797 aa8.14□□□□□ -1.11
SKP1-213ENST00000524288 YBX1P67809 324 aaKnown RBP8.14□□□□□ -1.11
SKP1-213ENST00000524288 POU4F1Q01851 419 aa8.14□□□□□ -1.11
SKP1-213ENST00000524288 LCE4AQ5TA78 99 aa8.14□□□□□ -1.11
SKP1-213ENST00000524288 DENND5AQ6IQ26 1287 aa8.14□□□□□ -1.11
SKP1-213ENST00000524288 KCNT2Q6UVM3 1135 aa8.14□□□□□ -1.11
SKP1-213ENST00000524288 LRRTM3Q86VH5 581 aa8.14□□□□□ -1.11
SKP1-213ENST00000524288 PLCD4Q9BRC7 762 aa8.14□□□□□ -1.11
SKP1-213ENST00000524288 KRTAP4-7Q9BYR0 210 aa8.14□□□□□ -1.11
SKP1-213ENST00000524288 CYP26B1Q9NR63 512 aa8.14□□□□□ -1.11
SKP1-213ENST00000524288 KLHL42Q9P2K6 505 aa8.14□□□□□ -1.11
SKP1-213ENST00000524288 CNOT6Q9ULM6 557 aaKnown RBP8.14□□□□□ -1.11
SKP1-213ENST00000524288 TNPO3Q9Y5L0 923 aaKnown RBP8.14□□□□□ -1.11
SKP1-213ENST00000524288 GSG1L2A8MUP6 293 aa8.13□□□□□ -1.11
SKP1-213ENST00000524288 MPOP05164 745 aa8.13□□□□□ -1.11
SKP1-213ENST00000524288 THBDP07204 575 aa8.13□□□□□ -1.11
SKP1-213ENST00000524288 CDKN1CP49918 316 aaPredicted RBP8.13□□□□□ -1.11
SKP1-213ENST00000524288 MAP4K2Q12851 820 aa8.13□□□□□ -1.11
SKP1-213ENST00000524288 ZNF385BQ569K4 471 aa8.13□□□□□ -1.11
SKP1-213ENST00000524288 SLC35F1Q5T1Q4 408 aa8.13□□□□□ -1.11
SKP1-213ENST00000524288 RNF180Q86T96 592 aa8.13□□□□□ -1.11
SKP1-213ENST00000524288 PPIL6Q8IXY8 311 aa8.13□□□□□ -1.11
SKP1-213ENST00000524288 CAAP1Q9H8G2 361 aa8.13□□□□□ -1.11
SKP1-213ENST00000524288 SIRT5Q9NXA8 310 aa8.13□□□□□ -1.11
SKP1-213ENST00000524288 MBD1Q9UIS9 605 aaPredicted RBP8.13□□□□□ -1.11
SKP1-213ENST00000524288 ACSL6Q9UKU0 697 aa8.13□□□□□ -1.11
SKP1-213ENST00000524288 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.12□□□□□ -1.11
SKP1-213ENST00000524288 OPA1O60313 960 aa8.12□□□□□ -1.11
SKP1-213ENST00000524288 POU3F3P20264 500 aaPredicted RBP8.12□□□□□ -1.11
SKP1-213ENST00000524288 GABREP78334 506 aa8.12□□□□□ -1.11
SKP1-213ENST00000524288 SRSF3P84103 164 aaKnown RBP8.12□□□□□ -1.11
SKP1-213ENST00000524288 TRIM61Q5EBN2 209 aa8.12□□□□□ -1.11
SKP1-213ENST00000524288 CYP2R1Q6VVX0 501 aa8.12□□□□□ -1.11
SKP1-213ENST00000524288 TMEM151BQ8IW70 566 aa8.12□□□□□ -1.11
SKP1-213ENST00000524288 STAG1Q8WVM7 1258 aa8.12□□□□□ -1.11
SKP1-213ENST00000524288 SCLYQ96I15 445 aa8.12□□□□□ -1.11
SKP1-213ENST00000524288 FCRL3Q96P31 734 aaPredicted RBP8.12□□□□□ -1.11
SKP1-213ENST00000524288 AP5S1Q9NUS5 200 aa8.12□□□□□ -1.11
SKP1-213ENST00000524288 MAGEC2Q9UBF1 373 aaPredicted RBP8.12□□□□□ -1.11
SKP1-213ENST00000524288 TMEFF2Q9UIK5 374 aaPredicted RBP8.12□□□□□ -1.11
SKP1-213ENST00000524288 BACE2Q9Y5Z0 518 aa8.12□□□□□ -1.11
SKP1-213ENST00000524288 C2orf71A6NGG8 1288 aa8.11□□□□□ -1.11
SKP1-213ENST00000524288 CPP00450 1065 aa8.11□□□□□ -1.11
SKP1-213ENST00000524288 SOX5P35711 763 aa8.11□□□□□ -1.11
SKP1-213ENST00000524288 NOP2P46087 812 aaKnown RBP8.11□□□□□ -1.11
SKP1-213ENST00000524288 NEK4P51957 841 aa8.11□□□□□ -1.11
SKP1-213ENST00000524288 NFKB2Q00653 900 aa8.11□□□□□ -1.11
SKP1-213ENST00000524288 FAM50AQ14320 339 aaKnown RBP8.11□□□□□ -1.11
SKP1-213ENST00000524288 RTP2Q5QGT7 225 aa8.11□□□□□ -1.11
SKP1-213ENST00000524288 PRPF38AQ8NAV1 312 aaKnown RBP8.11□□□□□ -1.11
SKP1-213ENST00000524288 KREMEN2Q8NCW0 462 aa8.11□□□□□ -1.11
SKP1-213ENST00000524288 GSTCDQ8NEC7 633 aa8.11□□□□□ -1.11
SKP1-213ENST00000524288 FRS2Q8WU20 508 aa8.11□□□□□ -1.11
SKP1-213ENST00000524288 LEO1Q8WVC0 666 aaPredicted RBP8.11□□□□□ -1.11
SKP1-213ENST00000524288 PTPRN2Q92932 1015 aa8.11□□□□□ -1.11
SKP1-213ENST00000524288 SIGLEC10Q96LC7 697 aa8.11□□□□□ -1.11
SKP1-213ENST00000524288 SLC12A9Q9BXP2 914 aa8.11□□□□□ -1.11
SKP1-213ENST00000524288 IRF2BPLQ9H1B7 796 aa8.11□□□□□ -1.11
SKP1-213ENST00000524288 TMX1Q9H3N1 280 aa8.11□□□□□ -1.11
SKP1-213ENST00000524288 DDX56Q9NY93 547 aaKnown RBP8.11□□□□□ -1.11
SKP1-213ENST00000524288 CLEC1BQ9P126 229 aa8.11□□□□□ -1.11
SKP1-213ENST00000524288 PCDHA9Q9Y5H5 950 aa8.11□□□□□ -1.11
SKP1-213ENST00000524288 FAM83GA6ND36 823 aa8.1□□□□□ -1.11
SKP1-213ENST00000524288 AURKAO14965 403 aa8.1□□□□□ -1.11
SKP1-213ENST00000524288 KPNA6O60684 536 aa8.1□□□□□ -1.11
SKP1-213ENST00000524288 CRTAMO95727 393 aa8.1□□□□□ -1.11
SKP1-213ENST00000524288 SCG5P05408 212 aa8.1□□□□□ -1.11
SKP1-213ENST00000524288 GSTM1P09488 218 aa8.1□□□□□ -1.11
SKP1-213ENST00000524288 PRKCAP17252 672 aa8.1□□□□□ -1.11
SKP1-213ENST00000524288 VIPR1P32241 457 aa8.1□□□□□ -1.11
SKP1-213ENST00000524288 CEBPAP49715 358 aaPredicted RBP8.1□□□□□ -1.11
SKP1-213ENST00000524288 CYP4F8P98187 520 aa8.1□□□□□ -1.11
SKP1-213ENST00000524288 PCBP1Q15365 356 aaKnown RBP eCLIP8.1□□□□□ -1.11
SKP1-213ENST00000524288 HLA-DQA1Q5Y7H0 255 aa8.1□□□□□ -1.11
SKP1-213ENST00000524288 TTLL10Q6ZVT0 673 aa8.1□□□□□ -1.11
SKP1-213ENST00000524288 STRA8Q7Z7C7 330 aa8.1□□□□□ -1.11
SKP1-213ENST00000524288 DDX42Q86XP3 938 aaKnown RBP eCLIP8.1□□□□□ -1.11
SKP1-213ENST00000524288 NAT16Q8N8M0 369 aa8.1□□□□□ -1.11
SKP1-213ENST00000524288 CCDC140Q96MF4 163 aa8.1□□□□□ -1.11
SKP1-213ENST00000524288 SGPP1Q9BX95 441 aa8.1□□□□□ -1.11
SKP1-213ENST00000524288 TNFRSF12AQ9NP84 129 aa8.1□□□□□ -1.11
SKP1-213ENST00000524288 ATP8A1Q9Y2Q0 1164 aa8.1□□□□□ -1.11
SKP1-213ENST00000524288 KCTD3Q9Y597 815 aa8.1□□□□□ -1.11
SKP1-213ENST00000524288 IRAK3Q9Y616 596 aa8.1□□□□□ -1.11
SKP1-213ENST00000524288 N4BP3O15049 544 aa8.09□□□□□ -1.11
SKP1-213ENST00000524288 KCNQ2O43526 872 aa8.09□□□□□ -1.11
SKP1-213ENST00000524288 EFCAB14O75071 495 aa8.09□□□□□ -1.11
SKP1-213ENST00000524288 JMJD7P0C870 316 aa8.09□□□□□ -1.11
SKP1-213ENST00000524288 PLS3P13797 630 aa8.09□□□□□ -1.11
SKP1-213ENST00000524288 SEPHS1P49903 392 aa8.09□□□□□ -1.11
SKP1-213ENST00000524288 PLEKHG6Q3KR16 790 aa8.09□□□□□ -1.11
SKP1-213ENST00000524288 TCERG1LQ5VWI1 586 aa8.09□□□□□ -1.11
SKP1-213ENST00000524288 PKN3Q6P5Z2 889 aa8.09□□□□□ -1.11
SKP1-213ENST00000524288 NUP43Q8NFH3 380 aa8.09□□□□□ -1.11
SKP1-213ENST00000524288 DDX1Q92499 740 aaKnown RBP8.09□□□□□ -1.11
SKP1-213ENST00000524288 COPS5Q92905 334 aa8.09□□□□□ -1.11
SKP1-213ENST00000524288 PHF20Q9BVI0 1012 aa8.09□□□□□ -1.11
SKP1-213ENST00000524288 ARNTLO00327 626 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms