RNA–Protein interactions for RNA: ENST00000523555.5

PABPC1-222, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-222ENST00000523555 IWS1Q96ST2 819 aa10.99□□□□□ -0.65
PABPC1-222ENST00000523555 UPF3BQ9BZI7 483 aaKnown RBP10.99□□□□□ -0.65
PABPC1-222ENST00000523555 ZSWIM6Q9HCJ5 1215 aa10.99□□□□□ -0.65
PABPC1-222ENST00000523555 SEC63Q9UGP8 760 aaKnown RBP10.99□□□□□ -0.65
PABPC1-222ENST00000523555 NID2Q14112 1375 aa10.99□□□□□ -0.65
PABPC1-222ENST00000523555 CDH23Q9H251 3354 aa10.98□□□□□ -0.65
PABPC1-222ENST00000523555 A0A0U1RQG5 324 aaPredicted RBP10.98□□□□□ -0.65
PABPC1-222ENST00000523555 ARVCFO00192 962 aa10.98□□□□□ -0.65
PABPC1-222ENST00000523555 DTNBO60941 627 aa10.98□□□□□ -0.65
PABPC1-222ENST00000523555 MYL3P08590 195 aa10.98□□□□□ -0.65
PABPC1-222ENST00000523555 CLTBP09497 229 aa10.98□□□□□ -0.65
PABPC1-222ENST00000523555 METAP2P50579 478 aaKnown RBP eCLIP10.98□□□□□ -0.653e-17■■■□□ 17.7
PABPC1-222ENST00000523555 PURAQ00577 322 aaKnown RBP10.98□□□□□ -0.65
PABPC1-222ENST00000523555 SP2Q02086 613 aa10.98□□□□□ -0.65
PABPC1-222ENST00000523555 SEMA3FQ13275 785 aa10.98□□□□□ -0.65
PABPC1-222ENST00000523555 TTLL4Q14679 1199 aa10.98□□□□□ -0.65
PABPC1-222ENST00000523555 SYNE3Q6ZMZ3 975 aa10.98□□□□□ -0.65
PABPC1-222ENST00000523555 RUFY3Q7L099 469 aa10.98□□□□□ -0.65
PABPC1-222ENST00000523555 ANKRD33Q7Z3H0 272 aa10.98□□□□□ -0.65
PABPC1-222ENST00000523555 HEATR3Q7Z4Q2 680 aa10.98□□□□□ -0.65
PABPC1-222ENST00000523555 VSIG10LQ86VR7 867 aa10.98□□□□□ -0.65
PABPC1-222ENST00000523555 FAM126BQ8IXS8 530 aa10.98□□□□□ -0.65
PABPC1-222ENST00000523555 SLC43A3Q8NBI5 491 aa10.98□□□□□ -0.65
PABPC1-222ENST00000523555 BADQ92934 168 aa10.98□□□□□ -0.65
PABPC1-222ENST00000523555 VTI1AQ96AJ9 217 aa10.98□□□□□ -0.65
PABPC1-222ENST00000523555 PGBD1Q96JS3 809 aa10.98□□□□□ -0.65
PABPC1-222ENST00000523555 MPHOSPH6Q99547 160 aaKnown RBP10.98□□□□□ -0.65
PABPC1-222ENST00000523555 RBM28Q9NW13 759 aaKnown RBP10.98□□□□□ -0.65
PABPC1-222ENST00000523555 MAP3K20Q9NYL2 800 aaKnown RBP10.98□□□□□ -0.65
PABPC1-222ENST00000523555 DDX41Q9UJV9 622 aaKnown RBP10.98□□□□□ -0.65
PABPC1-222ENST00000523555 TELO2Q9Y4R8 837 aa10.98□□□□□ -0.65
PABPC1-222ENST00000523555 V9GY48 417 aaPredicted RBP10.98□□□□□ -0.65
PABPC1-222ENST00000523555 ELP1O95163 1332 aa10.98□□□□□ -0.65
PABPC1-222ENST00000523555 A6NJR5 290 aa10.97□□□□□ -0.65
PABPC1-222ENST00000523555 STXBP3O00186 592 aa10.97□□□□□ -0.65
PABPC1-222ENST00000523555 PIK3CDO00329 1044 aa10.97□□□□□ -0.65
PABPC1-222ENST00000523555 EPB41L2O43491 1005 aaKnown RBP10.97□□□□□ -0.65
PABPC1-222ENST00000523555 EIF3JO75822 258 aaKnown RBP10.97□□□□□ -0.65
PABPC1-222ENST00000523555 CD4P01730 458 aa10.97□□□□□ -0.65
PABPC1-222ENST00000523555 MMP3P08254 477 aa10.97□□□□□ -0.65
PABPC1-222ENST00000523555 BMP8BP34820 402 aa10.97□□□□□ -0.65
PABPC1-222ENST00000523555 EPHB4P54760 987 aa10.97□□□□□ -0.65
PABPC1-222ENST00000523555 CCT2P78371 535 aaKnown RBP10.97□□□□□ -0.65
PABPC1-222ENST00000523555 FGD1P98174 961 aa10.97□□□□□ -0.65
PABPC1-222ENST00000523555 ITGA7Q13683 1181 aa10.97□□□□□ -0.65
PABPC1-222ENST00000523555 NTRK3Q16288 839 aa10.97□□□□□ -0.65
PABPC1-222ENST00000523555 FBXL16Q8N461 479 aa10.97□□□□□ -0.65
PABPC1-222ENST00000523555 SAMD3Q8N6K7 520 aa10.97□□□□□ -0.65
PABPC1-222ENST00000523555 SMARCC2Q8TAQ2 1214 aa10.97□□□□□ -0.65
PABPC1-222ENST00000523555 AFG1LQ8WV93 481 aa10.97□□□□□ -0.65
PABPC1-222ENST00000523555 PHKBQ93100 1093 aa10.97□□□□□ -0.65
PABPC1-222ENST00000523555 UBE2OQ9C0C9 1292 aaKnown RBP10.97□□□□□ -0.65
PABPC1-222ENST00000523555 NCOA5Q9HCD5 579 aaKnown RBP10.97□□□□□ -0.65
PABPC1-222ENST00000523555 RTEL1Q9NZ71 1219 aa10.97□□□□□ -0.65
PABPC1-222ENST00000523555 TBX21Q9UL17 535 aa10.97□□□□□ -0.65
PABPC1-222ENST00000523555 MRVI1Q9Y6F6 885 aa10.97□□□□□ -0.65
PABPC1-222ENST00000523555 TANC1Q9C0D5 1861 aa10.97□□□□□ -0.65
PABPC1-222ENST00000523555 GBF1Q92538 1859 aa10.96□□□□□ -0.65
PABPC1-222ENST00000523555 UMODL1Q5DID0 1318 aa10.96□□□□□ -0.65
PABPC1-222ENST00000523555 B4DLN1 442 aa10.96□□□□□ -0.65
PABPC1-222ENST00000523555 KIAA0355O15063 1070 aa10.96□□□□□ -0.65
PABPC1-222ENST00000523555 NKRFO15226 690 aaKnown RBP eCLIP10.96□□□□□ -0.65
PABPC1-222ENST00000523555 B4GALT4O60513 344 aa10.96□□□□□ -0.65
PABPC1-222ENST00000523555 GH1P01241 217 aa10.96□□□□□ -0.65
PABPC1-222ENST00000523555 UBA1P22314 1058 aaKnown RBP10.96□□□□□ -0.65
PABPC1-222ENST00000523555 PSMA5P28066 241 aa10.96□□□□□ -0.65
PABPC1-222ENST00000523555 PDIA3P30101 505 aaKnown RBP10.96□□□□□ -0.65
PABPC1-222ENST00000523555 CCND2P30279 289 aa10.96□□□□□ -0.65
PABPC1-222ENST00000523555 CPT1AP50416 773 aa10.96□□□□□ -0.65
PABPC1-222ENST00000523555 MRPL12P52815 198 aaKnown RBP10.96□□□□□ -0.65
PABPC1-222ENST00000523555 TRAF1Q13077 416 aa10.96□□□□□ -0.65
PABPC1-222ENST00000523555 PKN1Q16512 942 aa10.96□□□□□ -0.65
PABPC1-222ENST00000523555 C9orf50Q5SZB4 431 aa10.96□□□□□ -0.65
PABPC1-222ENST00000523555 KAT2BQ92831 832 aa10.96□□□□□ -0.65
PABPC1-222ENST00000523555 LRCH3Q96II8 777 aa10.96□□□□□ -0.65
PABPC1-222ENST00000523555 TOX2Q96NM4 488 aa10.96□□□□□ -0.65
PABPC1-222ENST00000523555 TRPV6Q9H1D0 765 aa10.96□□□□□ -0.65
PABPC1-222ENST00000523555 PSTPIP2Q9H939 334 aa10.96□□□□□ -0.65
PABPC1-222ENST00000523555 TMEM39AQ9NV64 488 aa10.96□□□□□ -0.65
PABPC1-222ENST00000523555 TMEM260Q9NX78 707 aa10.96□□□□□ -0.65
PABPC1-222ENST00000523555 WDR81Q562E7 1941 aa10.96□□□□□ -0.66
PABPC1-222ENST00000523555 ZEB2O60315 1214 aa10.95□□□□□ -0.66
PABPC1-222ENST00000523555 RCAN1P53805 252 aa10.95□□□□□ -0.66
PABPC1-222ENST00000523555 NAPAP54920 295 aa10.95□□□□□ -0.66
PABPC1-222ENST00000523555 EVCP57679 992 aa10.95□□□□□ -0.66
PABPC1-222ENST00000523555 NBPF20Q3BBV1 942 aa10.95□□□□□ -0.66
PABPC1-222ENST00000523555 HSDL1Q3SXM5 330 aa10.95□□□□□ -0.66
PABPC1-222ENST00000523555 MYSM1Q5VVJ2 828 aa10.95□□□□□ -0.66
PABPC1-222ENST00000523555 TDHQ8IZJ6 230 aa10.95□□□□□ -0.66
PABPC1-222ENST00000523555 INPP4AQ96PE3 977 aaPredicted RBP10.95□□□□□ -0.66
PABPC1-222ENST00000523555 PPP1R12CQ9BZL4 782 aa10.95□□□□□ -0.66
PABPC1-222ENST00000523555 TM6SF1Q9BZW5 370 aa10.95□□□□□ -0.66
PABPC1-222ENST00000523555 TRMT13Q9NUP7 481 aaKnown RBP10.95□□□□□ -0.66
PABPC1-222ENST00000523555 POLR3EQ9NVU0 708 aa10.95□□□□□ -0.66
PABPC1-222ENST00000523555 PRKAG2Q9UGJ0 569 aa10.95□□□□□ -0.66
PABPC1-222ENST00000523555 PCDHA6Q9UN73 950 aa10.95□□□□□ -0.66
PABPC1-222ENST00000523555 PCDHA8Q9Y5H6 950 aa10.95□□□□□ -0.66
PABPC1-222ENST00000523555 CYP46A1Q9Y6A2 500 aa10.95□□□□□ -0.66
PABPC1-222ENST00000523555 TET1Q8NFU7 2136 aa10.94□□□□□ -0.66
PABPC1-222ENST00000523555 MROH7Q68CQ1 1323 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms