RNA–Protein interactions for RNA: ENST00000523469.5

CPNE3-206, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-206ENST00000523469 SLC52A2Q9HAB3 445 aa8.69□□□□□ -1.02
CPNE3-206ENST00000523469 NUDT5Q9UKK9 219 aa8.69□□□□□ -1.02
CPNE3-206ENST00000523469 RNF114Q9Y508 228 aa8.69□□□□□ -1.02
CPNE3-206ENST00000523469 KCNQ2O43526 872 aa8.68□□□□□ -1.02
CPNE3-206ENST00000523469 PEX10O60683 326 aa8.68□□□□□ -1.02
CPNE3-206ENST00000523469 CDC45O75419 566 aa8.68□□□□□ -1.02
CPNE3-206ENST00000523469 ASMTLO95671 621 aa8.68□□□□□ -1.02
CPNE3-206ENST00000523469 MAPKAPK2P49137 400 aa8.68□□□□□ -1.02
CPNE3-206ENST00000523469 TCEA2Q15560 299 aa8.68□□□□□ -1.02
CPNE3-206ENST00000523469 FNDC3BQ53EP0 1204 aaKnown RBP8.68□□□□□ -1.02
CPNE3-206ENST00000523469 C16orf86Q6ZW13 317 aa8.68□□□□□ -1.02
CPNE3-206ENST00000523469 MTDHQ86UE4 582 aaKnown RBP8.68□□□□□ -1.02
CPNE3-206ENST00000523469 DCP2Q8IU60 420 aaKnown RBP8.68□□□□□ -1.02
CPNE3-206ENST00000523469 PEX11GQ96HA9 241 aa8.68□□□□□ -1.02
CPNE3-206ENST00000523469 DBR1Q9UK59 544 aaKnown RBP8.68□□□□□ -1.02
CPNE3-206ENST00000523469 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.67□□□□□ -1.02
CPNE3-206ENST00000523469 ZC3H12DA2A288 527 aaKnown RBP8.67□□□□□ -1.02
CPNE3-206ENST00000523469 F8W031 263 aaPredicted RBP8.67□□□□□ -1.02
CPNE3-206ENST00000523469 ENPP3O14638 875 aa8.67□□□□□ -1.02
CPNE3-206ENST00000523469 APPP05067 770 aa8.67□□□□□ -1.02
CPNE3-206ENST00000523469 GRK2P25098 689 aa8.67□□□□□ -1.02
CPNE3-206ENST00000523469 GRK3P35626 688 aa8.67□□□□□ -1.02
CPNE3-206ENST00000523469 GUCY1A3Q02108 690 aa8.67□□□□□ -1.02
CPNE3-206ENST00000523469 FBXO15Q8NCQ5 510 aaPredicted RBP8.67□□□□□ -1.02
CPNE3-206ENST00000523469 SLC7A14Q8TBB6 771 aa8.67□□□□□ -1.02
CPNE3-206ENST00000523469 PPP1R12AO14974 1030 aaPredicted RBP8.66□□□□□ -1.02
CPNE3-206ENST00000523469 DGKIO75912 1065 aa8.66□□□□□ -1.02
CPNE3-206ENST00000523469 RAPGEF3O95398 923 aa8.66□□□□□ -1.02
CPNE3-206ENST00000523469 CRTAMO95727 393 aa8.66□□□□□ -1.02
CPNE3-206ENST00000523469 SOD2P04179 222 aa8.66□□□□□ -1.02
CPNE3-206ENST00000523469 SLC6A11P48066 632 aa8.66□□□□□ -1.02
CPNE3-206ENST00000523469 PAK1Q13153 545 aa8.66□□□□□ -1.02
CPNE3-206ENST00000523469 PLEKHN1Q494U1 663 aaPredicted RBP8.66□□□□□ -1.02
CPNE3-206ENST00000523469 ZC3H14Q6PJT7 736 aaKnown RBP8.66□□□□□ -1.02
CPNE3-206ENST00000523469 NLGN1Q8N2Q7 840 aa8.66□□□□□ -1.02
CPNE3-206ENST00000523469 MAGEB10Q96LZ2 347 aaPredicted RBP8.66□□□□□ -1.02
CPNE3-206ENST00000523469 AP5M1Q9H0R1 490 aa8.66□□□□□ -1.02
CPNE3-206ENST00000523469 EPB41L1Q9H4G0 881 aa8.66□□□□□ -1.02
CPNE3-206ENST00000523469 PPARGC1AQ9UBK2 798 aaKnown RBP8.66□□□□□ -1.02
CPNE3-206ENST00000523469 FAM47E-STBD1D6RA91 191 aa8.65□□□□□ -1.02
CPNE3-206ENST00000523469 ARVCFO00192 962 aa8.65□□□□□ -1.02
CPNE3-206ENST00000523469 RFPL3O75679 317 aa8.65□□□□□ -1.02
CPNE3-206ENST00000523469 VIPR1P32241 457 aa8.65□□□□□ -1.02
CPNE3-206ENST00000523469 SDE2Q6IQ49 451 aa8.65□□□□□ -1.02
CPNE3-206ENST00000523469 SEC14L1Q92503 715 aa8.65□□□□□ -1.02
CPNE3-206ENST00000523469 FMNL2Q96PY5 1086 aa8.65□□□□□ -1.02
CPNE3-206ENST00000523469 JAM3Q9BX67 310 aa8.65□□□□□ -1.02
CPNE3-206ENST00000523469 PCDHA9Q9Y5H5 950 aa8.65□□□□□ -1.02
CPNE3-206ENST00000523469 PCDHA8Q9Y5H6 950 aa8.65□□□□□ -1.02
CPNE3-206ENST00000523469 FARP2O94887 1054 aaPredicted RBP8.64□□□□□ -1.03
CPNE3-206ENST00000523469 ZBTB7AO95365 584 aa8.64□□□□□ -1.03
CPNE3-206ENST00000523469 SRSF3P84103 164 aaKnown RBP8.64□□□□□ -1.03
CPNE3-206ENST00000523469 PRR5P85299 388 aa8.64□□□□□ -1.03
CPNE3-206ENST00000523469 SLC9A5Q14940 896 aa8.64□□□□□ -1.03
CPNE3-206ENST00000523469 CHRNA2Q15822 529 aa8.64□□□□□ -1.03
CPNE3-206ENST00000523469 TMC6Q7Z403 805 aa8.64□□□□□ -1.03
CPNE3-206ENST00000523469 BRAPQ7Z569 592 aa8.64□□□□□ -1.03
CPNE3-206ENST00000523469 TSPAN17Q96FV3 270 aa8.64□□□□□ -1.03
CPNE3-206ENST00000523469 IPPKQ9H8X2 491 aa8.64□□□□□ -1.03
CPNE3-206ENST00000523469 RXFP1Q9HBX9 757 aa8.64□□□□□ -1.03
CPNE3-206ENST00000523469 TRIM39Q9HCM9 518 aa8.64□□□□□ -1.03
CPNE3-206ENST00000523469 SIRT5Q9NXA8 310 aa8.64□□□□□ -1.03
CPNE3-206ENST00000523469 TEX51A0A1B0GUA7 166 aa8.63□□□□□ -1.03
CPNE3-206ENST00000523469 MYOCOSA0A1B0GUC4 107 aa8.63□□□□□ -1.03
CPNE3-206ENST00000523469 WNT9AO14904 365 aa8.63□□□□□ -1.03
CPNE3-206ENST00000523469 SEMA7AO75326 666 aa8.63□□□□□ -1.03
CPNE3-206ENST00000523469 MESP2Q0VG99 397 aa8.63□□□□□ -1.03
CPNE3-206ENST00000523469 PABPC4Q13310 644 aaKnown RBP eCLIP8.63□□□□□ -1.03
CPNE3-206ENST00000523469 PCDH19Q8TAB3 1148 aa8.63□□□□□ -1.03
CPNE3-206ENST00000523469 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.63□□□□□ -1.03
CPNE3-206ENST00000523469 SCLYQ96I15 445 aa8.63□□□□□ -1.03
CPNE3-206ENST00000523469 FAM84AQ96KN4 292 aa8.63□□□□□ -1.03
CPNE3-206ENST00000523469 CLUHP3Q96NS8 147 aa8.63□□□□□ -1.03
CPNE3-206ENST00000523469 FEZ1Q99689 392 aa8.63□□□□□ -1.03
CPNE3-206ENST00000523469 MCOLN1Q9GZU1 580 aa8.63□□□□□ -1.03
CPNE3-206ENST00000523469 KCNK12Q9HB15 430 aa8.63□□□□□ -1.03
CPNE3-206ENST00000523469 SIT1Q9Y3P8 196 aa8.63□□□□□ -1.03
CPNE3-206ENST00000523469 HGSO14964 777 aaPredicted RBP8.62□□□□□ -1.03
CPNE3-206ENST00000523469 SGSM2O43147 1006 aa8.62□□□□□ -1.03
CPNE3-206ENST00000523469 SPIRE1Q08AE8 756 aa8.62□□□□□ -1.03
CPNE3-206ENST00000523469 TKFCQ3LXA3 575 aa8.62□□□□□ -1.03
CPNE3-206ENST00000523469 PLEKHG4Q58EX7 1191 aa8.62□□□□□ -1.03
CPNE3-206ENST00000523469 EMC4Q5J8M3 183 aa8.62□□□□□ -1.03
CPNE3-206ENST00000523469 TMEM132EQ6IEE7 984 aa8.62□□□□□ -1.03
CPNE3-206ENST00000523469 OGFOD2Q6N063 350 aa8.62□□□□□ -1.03
CPNE3-206ENST00000523469 KCNJ15Q99712 375 aa8.62□□□□□ -1.03
CPNE3-206ENST00000523469 CD2APQ9Y5K6 639 aa8.62□□□□□ -1.03
CPNE3-206ENST00000523469 HCFC2Q9Y5Z7 792 aa8.62□□□□□ -1.03
CPNE3-206ENST00000523469 KRIT1O00522 736 aa8.61□□□□□ -1.03
CPNE3-206ENST00000523469 MAFKO60675 156 aa8.61□□□□□ -1.03
CPNE3-206ENST00000523469 RASGRP1O95267 797 aa8.61□□□□□ -1.03
CPNE3-206ENST00000523469 HSD3B2P26439 372 aa8.61□□□□□ -1.03
CPNE3-206ENST00000523469 STEAP3Q658P3 488 aa8.61□□□□□ -1.03
CPNE3-206ENST00000523469 OTOP3Q7RTS5 596 aa8.61□□□□□ -1.03
CPNE3-206ENST00000523469 FGD2Q7Z6J4 655 aa8.61□□□□□ -1.03
CPNE3-206ENST00000523469 KIAA0907Q7Z7F0 614 aaPredicted RBP8.61□□□□□ -1.03
CPNE3-206ENST00000523469 ZC3H7AQ8IWR0 971 aaKnown RBP8.61□□□□□ -1.03
CPNE3-206ENST00000523469 POU5F2Q8N7G0 328 aa8.61□□□□□ -1.03
CPNE3-206ENST00000523469 FBXW5Q969U6 566 aa8.61□□□□□ -1.03
CPNE3-206ENST00000523469 SLC6A20Q9NP91 592 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms