RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 KAT14Q9H8E8 782 aa30.32■■■□□ 2.44
PVT1-219ENST00000523427 ABCB11O95342 1321 aa30.31■■■□□ 2.44
PVT1-219ENST00000523427 ZNF213O14771 459 aa30.31■■■□□ 2.44
PVT1-219ENST00000523427 SELPP16109 830 aa30.31■■■□□ 2.44
PVT1-219ENST00000523427 EIF2AK2P19525 551 aaKnown RBP30.31■■■□□ 2.44
PVT1-219ENST00000523427 DEFB103AP81534 67 aa30.31■■■□□ 2.44
PVT1-219ENST00000523427 GPNMBQ14956 572 aa30.31■■■□□ 2.44
PVT1-219ENST00000523427 STXBP2Q15833 593 aa30.31■■■□□ 2.44
PVT1-219ENST00000523427 DHX38Q92620 1227 aaKnown RBP30.31■■■□□ 2.44
PVT1-219ENST00000523427 HLA-CQ95604 372 aa30.31■■■□□ 2.44
PVT1-219ENST00000523427 CTAGE1Q96RT6 745 aa30.31■■■□□ 2.44
PVT1-219ENST00000523427 COG5Q9UP83 839 aa30.31■■■□□ 2.44
PVT1-219ENST00000523427 XIRP2A4UGR9 3374 aa30.31■■■□□ 2.44
PVT1-219ENST00000523427 TANC1Q9C0D5 1861 aa30.3■■■□□ 2.44
PVT1-219ENST00000523427 SORBS3O60504 671 aa30.3■■■□□ 2.44
PVT1-219ENST00000523427 KDM4AO75164 1064 aa30.3■■■□□ 2.44
PVT1-219ENST00000523427 ARHGEF16Q5VV41 709 aa30.3■■■□□ 2.44
PVT1-219ENST00000523427 DGKHQ86XP1 1220 aa30.3■■■□□ 2.44
PVT1-219ENST00000523427 C7orf31Q8N865 590 aa30.3■■■□□ 2.44
PVT1-219ENST00000523427 C1QTNF1Q9BXJ1 281 aa30.3■■■□□ 2.44
PVT1-219ENST00000523427 HDAC6Q9UBN7 1215 aa30.3■■■□□ 2.44
PVT1-219ENST00000523427 RRP1P56182 461 aaKnown RBP30.29■■■□□ 2.44
PVT1-219ENST00000523427 QRICH1Q2TAL8 776 aa30.29■■■□□ 2.44
PVT1-219ENST00000523427 FAM117BQ6P1L5 589 aa30.29■■■□□ 2.44
PVT1-219ENST00000523427 IQCA1Q86XH1 822 aa30.29■■■□□ 2.44
PVT1-219ENST00000523427 MCF2L2Q86YR7 1114 aa30.29■■■□□ 2.44
PVT1-219ENST00000523427 GDPD5Q8WTR4 605 aa30.29■■■□□ 2.44
PVT1-219ENST00000523427 EPHX3Q9H6B9 360 aa30.29■■■□□ 2.44
PVT1-219ENST00000523427 B4E1Z4 1266 aa30.28■■■□□ 2.44
PVT1-219ENST00000523427 PSEN2P49810 448 aa30.28■■■□□ 2.44
PVT1-219ENST00000523427 DGKDQ16760 1214 aa30.28■■■□□ 2.44
PVT1-219ENST00000523427 B4GALNT3Q6L9W6 998 aa30.28■■■□□ 2.44
PVT1-219ENST00000523427 MRVI1Q9Y6F6 885 aa30.28■■■□□ 2.44
PVT1-219ENST00000523427 LPXNO60711 386 aa30.27■■■□□ 2.44
PVT1-219ENST00000523427 NBNO60934 754 aa30.27■■■□□ 2.44
PVT1-219ENST00000523427 CFBP00751 764 aa30.27■■■□□ 2.44
PVT1-219ENST00000523427 ZNF286BP0CG31 522 aa30.27■■■□□ 2.44
PVT1-219ENST00000523427 CKBP12277 381 aa30.27■■■□□ 2.44
PVT1-219ENST00000523427 SDSP20132 328 aa30.27■■■□□ 2.44
PVT1-219ENST00000523427 MFAP1P55081 439 aaKnown RBP30.27■■■□□ 2.44
PVT1-219ENST00000523427 TCTN1Q2MV58 587 aa30.27■■■□□ 2.44
PVT1-219ENST00000523427 CNKSR3Q6P9H4 555 aa30.27■■■□□ 2.44
PVT1-219ENST00000523427 SESTD1Q86VW0 696 aa30.27■■■□□ 2.44
PVT1-219ENST00000523427 FBXO11Q86XK2 927 aa30.27■■■□□ 2.44
PVT1-219ENST00000523427 FAM122AQ96E09 287 aa30.27■■■□□ 2.44
PVT1-219ENST00000523427 IWS1Q96ST2 819 aa30.27■■■□□ 2.44
PVT1-219ENST00000523427 GTF2IRD1Q9UHL9 959 aa30.27■■■□□ 2.44
PVT1-219ENST00000523427 DDX41Q9UJV9 622 aaKnown RBP30.27■■■□□ 2.44
PVT1-219ENST00000523427 MRPL11Q9Y3B7 192 aaKnown RBP30.27■■■□□ 2.44
PVT1-219ENST00000523427 MFSD10Q14728 455 aa30.25■■■□□ 2.43
PVT1-219ENST00000523427 KIAA0753Q2KHM9 967 aa30.25■■■□□ 2.43
PVT1-219ENST00000523427 ASPRV1Q53RT3 343 aa30.25■■■□□ 2.43
PVT1-219ENST00000523427 CWC27Q6UX04 472 aaKnown RBP30.25■■■□□ 2.43
PVT1-219ENST00000523427 ZSCAN10Q96SZ4 725 aaPredicted RBP30.25■■■□□ 2.43
PVT1-219ENST00000523427 JMJD4Q9H9V9 463 aa30.25■■■□□ 2.43
PVT1-219ENST00000523427 EIF3JO75822 258 aaKnown RBP30.24■■■□□ 2.43
PVT1-219ENST00000523427 NR3C2P08235 984 aa30.24■■■□□ 2.43
PVT1-219ENST00000523427 PARP1P09874 1014 aaKnown RBP30.24■■■□□ 2.43
PVT1-219ENST00000523427 MYCLP12524 364 aaPredicted RBP30.24■■■□□ 2.43
PVT1-219ENST00000523427 PLA2G5P39877 138 aa30.24■■■□□ 2.43
PVT1-219ENST00000523427 ZNF200P98182 395 aaPredicted RBP30.24■■■□□ 2.43
PVT1-219ENST00000523427 HDAC1Q13547 482 aaPredicted RBP30.24■■■□□ 2.43
PVT1-219ENST00000523427 CCDC178Q5BJE1 867 aa30.24■■■□□ 2.43
PVT1-219ENST00000523427 DHX37Q8IY37 1157 aaKnown RBP30.24■■■□□ 2.43
PVT1-219ENST00000523427 LAMC2Q13753 1193 aa30.23■■■□□ 2.43
PVT1-219ENST00000523427 TICAM2Q86XR7 235 aa30.23■■■□□ 2.43
PVT1-219ENST00000523427 ENAHQ8N8S7 591 aaPredicted RBP30.23■■■□□ 2.43
PVT1-219ENST00000523427 PXMP2Q9NR77 195 aa30.23■■■□□ 2.43
PVT1-219ENST00000523427 IKBKEQ14164 716 aa30.22■■■□□ 2.43
PVT1-219ENST00000523427 ZNF618Q5T7W0 954 aa30.22■■■□□ 2.43
PVT1-219ENST00000523427 WNT8BQ93098 351 aa30.22■■■□□ 2.43
PVT1-219ENST00000523427 RAD9AQ99638 391 aa30.22■■■□□ 2.43
PVT1-219ENST00000523427 KATNAL1Q9BW62 490 aa30.22■■■□□ 2.43
PVT1-219ENST00000523427 SUGCTQ9HAC7 445 aa30.22■■■□□ 2.43
PVT1-219ENST00000523427 DIAPH3Q9NSV4 1193 aa30.22■■■□□ 2.43
PVT1-219ENST00000523427 ZSWIM5Q9P217 1185 aa30.22■■■□□ 2.43
PVT1-219ENST00000523427 PTPRSQ13332 1948 aa30.22■■■□□ 2.43
PVT1-219ENST00000523427 ABHD14A-ACY1A0A1B0GW23 586 aa30.21■■■□□ 2.43
PVT1-219ENST00000523427 GJB5O95377 273 aa30.21■■■□□ 2.43
PVT1-219ENST00000523427 CXCL10P02778 98 aa30.21■■■□□ 2.43
PVT1-219ENST00000523427 ZFP91Q96JP5 570 aaPredicted RBP30.21■■■□□ 2.43
PVT1-219ENST00000523427 PARNO95453 639 aaKnown RBP30.2■■■□□ 2.43
PVT1-219ENST00000523427 PTK7Q13308 1070 aa30.2■■■□□ 2.43
PVT1-219ENST00000523427 ANKS1AQ92625 1134 aa30.2■■■□□ 2.43
PVT1-219ENST00000523427 TGS1Q96RS0 853 aaKnown RBP30.2■■■□□ 2.43
PVT1-219ENST00000523427 LRFN3Q9BTN0 628 aa30.2■■■□□ 2.43
PVT1-219ENST00000523427 F2P00734 622 aa30.19■■■□□ 2.42
PVT1-219ENST00000523427 RBL2Q08999 1139 aa30.19■■■□□ 2.42
PVT1-219ENST00000523427 STAG2Q8N3U4 1231 aa30.19■■■□□ 2.42
PVT1-219ENST00000523427 PPTC7Q8NI37 304 aa30.19■■■□□ 2.42
PVT1-219ENST00000523427 MAF1Q9H063 256 aa30.19■■■□□ 2.42
PVT1-219ENST00000523427 LINC01553A4QN01 128 aa30.18■■■□□ 2.42
PVT1-219ENST00000523427 HOXA13P31271 388 aaPredicted RBP30.18■■■□□ 2.42
PVT1-219ENST00000523427 TRIM71Q2Q1W2 868 aaKnown RBP30.18■■■□□ 2.42
PVT1-219ENST00000523427 LIN28BQ6ZN17 250 aaKnown RBP eCLIP30.18■■■□□ 2.42
PVT1-219ENST00000523427 KHSRPQ92945 711 aaKnown RBP eCLIP30.18■■■□□ 2.42
PVT1-219ENST00000523427 EMID1Q96A84 441 aaPredicted RBP30.18■■■□□ 2.42
PVT1-219ENST00000523427 SPATA33Q96N06 139 aa30.18■■■□□ 2.42
PVT1-219ENST00000523427 UBAC1Q9BSL1 405 aa30.18■■■□□ 2.42
PVT1-219ENST00000523427 AMNQ9BXJ7 453 aa30.18■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms