RNA–Protein interactions for RNA: ENST00000523276.1

SHPRH-210, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 2

Gene SHPRH, Length 2,030 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-210ENST00000523276 SV2BQ7L1I2 683 aa7.46□□□□□ -1.22
SHPRH-210ENST00000523276 MICALL2Q8IY33 904 aa7.46□□□□□ -1.22
SHPRH-210ENST00000523276 SLAIN1Q8ND83 568 aa7.46□□□□□ -1.22
SHPRH-210ENST00000523276 GMCL1P1Q8NEA9 526 aa7.46□□□□□ -1.22
SHPRH-210ENST00000523276 ERO1AQ96HE7 468 aa7.46□□□□□ -1.22
SHPRH-210ENST00000523276 TRIM47Q96LD4 638 aa7.46□□□□□ -1.22
SHPRH-210ENST00000523276 NAP1L4Q99733 375 aaKnown RBP7.46□□□□□ -1.22
SHPRH-210ENST00000523276 TDRD3Q9H7E2 651 aaKnown RBP7.46□□□□□ -1.22
SHPRH-210ENST00000523276 BLOC1S4Q9NUP1 217 aa7.46□□□□□ -1.22
SHPRH-210ENST00000523276 STK32BQ9NY57 414 aa7.46□□□□□ -1.22
SHPRH-210ENST00000523276 ZNF215Q9UL58 517 aaPredicted RBP7.46□□□□□ -1.22
SHPRH-210ENST00000523276 SLX4Q8IY92 1834 aa7.46□□□□□ -1.22
SHPRH-210ENST00000523276 BICDL2A1A5D9 508 aa7.45□□□□□ -1.22
SHPRH-210ENST00000523276 POTEMA6NI47 508 aa7.45□□□□□ -1.22
SHPRH-210ENST00000523276 SOWAHDA6NJG2 315 aa7.45□□□□□ -1.22
SHPRH-210ENST00000523276 YDJCA8MPS7 323 aa7.45□□□□□ -1.22
SHPRH-210ENST00000523276 LGALS16A8MUM7 142 aa7.45□□□□□ -1.22
SHPRH-210ENST00000523276 PPIP5K2O43314 1243 aa7.45□□□□□ -1.22
SHPRH-210ENST00000523276 GDF11O95390 407 aa7.45□□□□□ -1.22
SHPRH-210ENST00000523276 CCNE1P24864 410 aa7.45□□□□□ -1.22
SHPRH-210ENST00000523276 FXR1P51114 621 aaKnown RBP eCLIP7.45□□□□□ -1.22
SHPRH-210ENST00000523276 STK4Q13043 487 aa7.45□□□□□ -1.22
SHPRH-210ENST00000523276 EZH2Q15910 746 aaKnown RBP7.45□□□□□ -1.22
SHPRH-210ENST00000523276 CDC37Q16543 378 aaPredicted RBP7.45□□□□□ -1.22
SHPRH-210ENST00000523276 ABCB5Q2M3G0 1257 aa7.45□□□□□ -1.22
SHPRH-210ENST00000523276 KRT79Q5XKE5 535 aa7.45□□□□□ -1.22
SHPRH-210ENST00000523276 CNNM4Q6P4Q7 775 aa7.45□□□□□ -1.22
SHPRH-210ENST00000523276 CPLX3Q8WVH0 158 aa7.45□□□□□ -1.22
SHPRH-210ENST00000523276 RAD54LQ92698 747 aa7.45□□□□□ -1.22
SHPRH-210ENST00000523276 P2RX5Q93086 422 aa7.45□□□□□ -1.22
SHPRH-210ENST00000523276 GMCL1Q96IK5 515 aa7.45□□□□□ -1.22
SHPRH-210ENST00000523276 CDK5RAP3Q96JB5 506 aa7.45□□□□□ -1.22
SHPRH-210ENST00000523276 CAMKK2Q96RR4 588 aa7.45□□□□□ -1.22
SHPRH-210ENST00000523276 DUSP9Q99956 384 aaKnown RBP7.45□□□□□ -1.22
SHPRH-210ENST00000523276 SRRTQ9BXP5 876 aaKnown RBP7.45□□□□□ -1.22
SHPRH-210ENST00000523276 DDX25Q9UHL0 483 aaKnown RBP7.45□□□□□ -1.22
SHPRH-210ENST00000523276 DNAI1Q9UI46 699 aa7.45□□□□□ -1.22
SHPRH-210ENST00000523276 PCDHA1Q9Y5I3 950 aa7.45□□□□□ -1.22
SHPRH-210ENST00000523276 PVALEFA0A1B0GWK0 134 aa7.45□□□□□ -1.22
SHPRH-210ENST00000523276 GRXCR2A6NFK2 248 aa7.45□□□□□ -1.22
SHPRH-210ENST00000523276 MYMKA6NI61 221 aa7.45□□□□□ -1.22
SHPRH-210ENST00000523276 F5H6K3 240 aa7.45□□□□□ -1.22
SHPRH-210ENST00000523276 FANCGO15287 622 aa7.45□□□□□ -1.22
SHPRH-210ENST00000523276 CCDC175P0C221 793 aa7.45□□□□□ -1.22
SHPRH-210ENST00000523276 FCER1AP12319 257 aa7.45□□□□□ -1.22
SHPRH-210ENST00000523276 UBXN1Q04323 297 aa7.45□□□□□ -1.22
SHPRH-210ENST00000523276 KLRC3Q07444 240 aa7.45□□□□□ -1.22
SHPRH-210ENST00000523276 NAA30Q147X3 362 aaPredicted RBP7.45□□□□□ -1.22
SHPRH-210ENST00000523276 MTF1Q14872 753 aa7.45□□□□□ -1.22
SHPRH-210ENST00000523276 PPP1R15BQ5SWA1 713 aa7.45□□□□□ -1.22
SHPRH-210ENST00000523276 TMEM92Q6UXU6 159 aa7.45□□□□□ -1.22
SHPRH-210ENST00000523276 RAD9BQ6WBX8 426 aa7.45□□□□□ -1.22
SHPRH-210ENST00000523276 UNC13DQ70J99 1090 aa7.45□□□□□ -1.22
SHPRH-210ENST00000523276 PDCL2Q8N4E4 241 aa7.45□□□□□ -1.22
SHPRH-210ENST00000523276 SNX29Q8TEQ0 813 aa7.45□□□□□ -1.22
SHPRH-210ENST00000523276 LARP4BQ92615 738 aaKnown RBP7.45□□□□□ -1.22
SHPRH-210ENST00000523276 HAS1Q92839 578 aa7.45□□□□□ -1.22
SHPRH-210ENST00000523276 PRMT6Q96LA8 375 aaPredicted RBP7.45□□□□□ -1.22
SHPRH-210ENST00000523276 DESI2Q9BSY9 194 aa7.45□□□□□ -1.22
SHPRH-210ENST00000523276 MAGEC2Q9UBF1 373 aaPredicted RBP7.45□□□□□ -1.22
SHPRH-210ENST00000523276 SCN9AQ15858 1988 aa7.45□□□□□ -1.22
SHPRH-210ENST00000523276 CYP3A7-CYP3A51PA0A087WV96 503 aa7.44□□□□□ -1.22
SHPRH-210ENST00000523276 A0A1W2PQC6 194 aa7.44□□□□□ -1.22
SHPRH-210ENST00000523276 USP17L15C9J2P7 530 aa7.44□□□□□ -1.22
SHPRH-210ENST00000523276 USP17L13C9JLJ4 530 aa7.44□□□□□ -1.22
SHPRH-210ENST00000523276 USP17L11C9JVI0 530 aa7.44□□□□□ -1.22
SHPRH-210ENST00000523276 USP17L18D6R9N7 530 aa7.44□□□□□ -1.22
SHPRH-210ENST00000523276 USP17L22D6RA61 530 aa7.44□□□□□ -1.22
SHPRH-210ENST00000523276 USP17L17D6RBQ6 530 aa7.44□□□□□ -1.22
SHPRH-210ENST00000523276 USP17L19D6RCP7 530 aa7.44□□□□□ -1.22
SHPRH-210ENST00000523276 USP17L20D6RJB6 530 aa7.44□□□□□ -1.22
SHPRH-210ENST00000523276 C21orf2O43822 256 aa7.44□□□□□ -1.22
SHPRH-210ENST00000523276 NDUFB10O96000 172 aa7.44□□□□□ -1.22
SHPRH-210ENST00000523276 CYP3A7P24462 503 aa7.44□□□□□ -1.22
SHPRH-210ENST00000523276 HOXA7P31268 230 aaPredicted RBP7.44□□□□□ -1.22
SHPRH-210ENST00000523276 USP11P51784 963 aa7.44□□□□□ -1.22
SHPRH-210ENST00000523276 JAG1P78504 1218 aa7.44□□□□□ -1.22
SHPRH-210ENST00000523276 EN1Q05925 392 aaPredicted RBP7.44□□□□□ -1.22
SHPRH-210ENST00000523276 USP17L24Q0WX57 530 aa7.44□□□□□ -1.22
SHPRH-210ENST00000523276 AP3B2Q13367 1082 aa7.44□□□□□ -1.22
SHPRH-210ENST00000523276 GRIPAP1Q4V328 841 aa7.44□□□□□ -1.22
SHPRH-210ENST00000523276 SYDE2Q5VT97 1194 aa7.44□□□□□ -1.22
SHPRH-210ENST00000523276 ANKRD40Q6AI12 368 aa7.44□□□□□ -1.22
SHPRH-210ENST00000523276 USP17L6PQ6QN14 398 aa7.44□□□□□ -1.22
SHPRH-210ENST00000523276 TMTC1Q8IUR5 882 aa7.44□□□□□ -1.22
SHPRH-210ENST00000523276 CREBRFQ8IUR6 639 aa7.44□□□□□ -1.22
SHPRH-210ENST00000523276 CSGALNACT2Q8N6G5 542 aa7.44□□□□□ -1.22
SHPRH-210ENST00000523276 MB21D1Q8N884 522 aa7.44□□□□□ -1.22
SHPRH-210ENST00000523276 KIAA0895Q8NCT3 520 aa7.44□□□□□ -1.22
SHPRH-210ENST00000523276 ZNF507Q8TCN5 953 aa7.44□□□□□ -1.22
SHPRH-210ENST00000523276 MBOAT7Q96N66 472 aa7.44□□□□□ -1.22
SHPRH-210ENST00000523276 NUDT12Q9BQG2 462 aa7.44□□□□□ -1.22
SHPRH-210ENST00000523276 ANO3Q9BYT9 981 aa7.44□□□□□ -1.22
SHPRH-210ENST00000523276 LRRC27Q9C0I9 530 aa7.44□□□□□ -1.22
SHPRH-210ENST00000523276 MRPL44Q9H9J2 332 aaKnown RBP7.44□□□□□ -1.22
SHPRH-210ENST00000523276 ABHD10Q9NUJ1 306 aa7.44□□□□□ -1.22
SHPRH-210ENST00000523276 SYNPO2Q9UMS6 1093 aa7.44□□□□□ -1.22
SHPRH-210ENST00000523276 ADGRG1Q9Y653 693 aa7.44□□□□□ -1.22
SHPRH-210ENST00000523276 RNF225M0QZC1 329 aaPredicted RBP7.44□□□□□ -1.22
SHPRH-210ENST00000523276 MEIS2O14770 477 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms