RNA–Protein interactions for RNA: ENST00000522905.1

MCPH1-207, Transcript of microcephalin 1, humanhuman

TSL 2 BASIC

Gene MCPH1, Length 2,049 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCPH1-207ENST00000522905 PTPRUQ92729 1446 aa12.85□□□□□ -0.35
MCPH1-207ENST00000522905 DDX60Q8IY21 1712 aaKnown RBP12.85□□□□□ -0.35
MCPH1-207ENST00000522905 CCDC169A6NNP5 214 aa12.84□□□□□ -0.35
MCPH1-207ENST00000522905 CCDC188H7C350 402 aa12.84□□□□□ -0.35
MCPH1-207ENST00000522905 SART1O43290 800 aaKnown RBP12.84□□□□□ -0.35
MCPH1-207ENST00000522905 KIF4AO95239 1232 aa12.84□□□□□ -0.35
MCPH1-207ENST00000522905 FMNL1O95466 1100 aaPredicted RBP12.84□□□□□ -0.35
MCPH1-207ENST00000522905 CCNB1P14635 433 aa12.84□□□□□ -0.35
MCPH1-207ENST00000522905 CD44P16070 742 aaKnown RBP12.84□□□□□ -0.35
MCPH1-207ENST00000522905 METAP2P50579 478 aaKnown RBP eCLIP12.84□□□□□ -0.35
MCPH1-207ENST00000522905 ALDH5A1P51649 535 aaPredicted RBP12.84□□□□□ -0.35
MCPH1-207ENST00000522905 EIF4A1P60842 406 aaKnown RBP12.84□□□□□ -0.35
MCPH1-207ENST00000522905 SOS2Q07890 1332 aaPredicted RBP12.84□□□□□ -0.35
MCPH1-207ENST00000522905 GSTA3Q16772 222 aa12.84□□□□□ -0.35
MCPH1-207ENST00000522905 TRIM42Q8IWZ5 723 aa12.84□□□□□ -0.35
MCPH1-207ENST00000522905 IFT81Q8WYA0 676 aa12.84□□□□□ -0.35
MCPH1-207ENST00000522905 RBM17Q96I25 401 aaKnown RBP12.84□□□□□ -0.35
MCPH1-207ENST00000522905 MAML3Q96JK9 1138 aa12.84□□□□□ -0.35
MCPH1-207ENST00000522905 TMEM237Q96Q45 408 aa12.84□□□□□ -0.35
MCPH1-207ENST00000522905 MTA3Q9BTC8 594 aa12.84□□□□□ -0.35
MCPH1-207ENST00000522905 VPS16Q9H269 839 aa12.84□□□□□ -0.35
MCPH1-207ENST00000522905 DBNLQ9UJU6 430 aaKnown RBP12.84□□□□□ -0.35
MCPH1-207ENST00000522905 TMEM59LQ9UK28 342 aa12.84□□□□□ -0.35
MCPH1-207ENST00000522905 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.84□□□□□ -0.35
MCPH1-207ENST00000522905 WDR37Q9Y2I8 494 aa12.84□□□□□ -0.35
MCPH1-207ENST00000522905 LRCH1Q9Y2L9 728 aa12.84□□□□□ -0.35
MCPH1-207ENST00000522905 PCDHA13Q9Y5I0 950 aa12.84□□□□□ -0.35
MCPH1-207ENST00000522905 MYH8P13535 1937 aa12.84□□□□□ -0.35
MCPH1-207ENST00000522905 RNF225M0QZC1 329 aaPredicted RBP12.84□□□□□ -0.35
MCPH1-207ENST00000522905 RNF113AO15541 343 aaKnown RBP12.84□□□□□ -0.35
MCPH1-207ENST00000522905 TMCC1O94876 653 aa12.84□□□□□ -0.35
MCPH1-207ENST00000522905 MMP1P03956 469 aa12.84□□□□□ -0.35
MCPH1-207ENST00000522905 IDO1P14902 403 aa12.84□□□□□ -0.35
MCPH1-207ENST00000522905 TRIM21P19474 475 aaKnown RBP12.84□□□□□ -0.35
MCPH1-207ENST00000522905 MMP13P45452 471 aa12.84□□□□□ -0.35
MCPH1-207ENST00000522905 NCALDP61601 193 aa12.84□□□□□ -0.35
MCPH1-207ENST00000522905 KPNB1Q14974 876 aaKnown RBP12.84□□□□□ -0.35
MCPH1-207ENST00000522905 PPP2R5BQ15173 497 aa12.84□□□□□ -0.35
MCPH1-207ENST00000522905 ZNF827Q17R98 1081 aa12.84□□□□□ -0.35
MCPH1-207ENST00000522905 KLHL10Q6JEL2 608 aa12.84□□□□□ -0.35
MCPH1-207ENST00000522905 RNF168Q8IYW5 571 aaPredicted RBP12.84□□□□□ -0.35
MCPH1-207ENST00000522905 ERGIC2Q96RQ1 377 aa12.84□□□□□ -0.35
MCPH1-207ENST00000522905 TIPINQ9BVW5 301 aa12.84□□□□□ -0.35
MCPH1-207ENST00000522905 MMADHCQ9H3L0 296 aaPredicted RBP12.84□□□□□ -0.35
MCPH1-207ENST00000522905 RXFP1Q9HBX9 757 aa12.84□□□□□ -0.35
MCPH1-207ENST00000522905 ADAM22Q9P0K1 906 aa12.84□□□□□ -0.35
MCPH1-207ENST00000522905 PEAK1Q9H792 1746 aa12.84□□□□□ -0.35
MCPH1-207ENST00000522905 NRXN3Q9Y4C0 1643 aa12.83□□□□□ -0.35
MCPH1-207ENST00000522905 DISP2A7MBM2 1401 aa12.83□□□□□ -0.36
MCPH1-207ENST00000522905 MROH7Q68CQ1 1323 aa12.83□□□□□ -0.36
MCPH1-207ENST00000522905 SSU72P8A0A1W2PR75 194 aa12.83□□□□□ -0.36
MCPH1-207ENST00000522905 MACROD2A1Z1Q3 448 aa12.83□□□□□ -0.36
MCPH1-207ENST00000522905 GTPBP6O43824 516 aaPredicted RBP12.83□□□□□ -0.36
MCPH1-207ENST00000522905 HNRNPCL1O60812 293 aaKnown RBP12.83□□□□□ -0.36
MCPH1-207ENST00000522905 NUDT17P0C025 328 aa12.83□□□□□ -0.36
MCPH1-207ENST00000522905 FAM153BP0C7A2 387 aa12.83□□□□□ -0.36
MCPH1-207ENST00000522905 RARAP10276 462 aa12.83□□□□□ -0.36
MCPH1-207ENST00000522905 SKIP12755 728 aa12.83□□□□□ -0.36
MCPH1-207ENST00000522905 RASSF2P50749 326 aa12.83□□□□□ -0.36
MCPH1-207ENST00000522905 CLUL1Q15846 466 aa12.83□□□□□ -0.36
MCPH1-207ENST00000522905 FAM153CQ494X1 144 aa12.83□□□□□ -0.36
MCPH1-207ENST00000522905 WASHC2DQ5SRD0 308 aa12.83□□□□□ -0.36
MCPH1-207ENST00000522905 CCDC84Q86UT8 332 aaPredicted RBP12.83□□□□□ -0.36
MCPH1-207ENST00000522905 SGMS1Q86VZ5 419 aa12.83□□□□□ -0.36
MCPH1-207ENST00000522905 AGGF1Q8N302 714 aaeCLIP12.83□□□□□ -0.36
MCPH1-207ENST00000522905 RBBP8NLQ8NC74 664 aaPredicted RBP12.83□□□□□ -0.36
MCPH1-207ENST00000522905 ATXN2LQ8WWM7 1075 aaKnown RBP12.83□□□□□ -0.36
MCPH1-207ENST00000522905 SEC14L1Q92503 715 aa12.83□□□□□ -0.36
MCPH1-207ENST00000522905 GRAMD1AQ96CP6 724 aa12.83□□□□□ -0.36
MCPH1-207ENST00000522905 TLR10Q9BXR5 811 aa12.83□□□□□ -0.36
MCPH1-207ENST00000522905 TXLNGQ9NUQ3 528 aa12.83□□□□□ -0.36
MCPH1-207ENST00000522905 EXOC1Q9NV70 894 aa12.83□□□□□ -0.36
MCPH1-207ENST00000522905 TLR7Q9NYK1 1049 aaKnown RBP12.83□□□□□ -0.36
MCPH1-207ENST00000522905 FAM153AQ9UHL3 310 aa12.83□□□□□ -0.36
MCPH1-207ENST00000522905 USP15Q9Y4E8 981 aaPredicted RBP12.83□□□□□ -0.36
MCPH1-207ENST00000522905 COMMD3-BMI1R4GMX3 469 aa12.83□□□□□ -0.36
MCPH1-207ENST00000522905 ABCB11O95342 1321 aa12.83□□□□□ -0.36
MCPH1-207ENST00000522905 POTEFA5A3E0 1075 aa12.83□□□□□ -0.36
MCPH1-207ENST00000522905 PHF20L1A8MW92 1017 aa12.83□□□□□ -0.36
MCPH1-207ENST00000522905 PARP1P09874 1014 aaKnown RBP12.83□□□□□ -0.36
MCPH1-207ENST00000522905 POTEIP0CG38 1075 aa12.83□□□□□ -0.36
MCPH1-207ENST00000522905 POTEJP0CG39 1038 aa12.83□□□□□ -0.36
MCPH1-207ENST00000522905 PDE6BP35913 854 aa12.83□□□□□ -0.36
MCPH1-207ENST00000522905 PSMD7P51665 324 aa12.83□□□□□ -0.36
MCPH1-207ENST00000522905 DIXDC1Q155Q3 683 aa12.83□□□□□ -0.36
MCPH1-207ENST00000522905 ENOX2Q16206 610 aaKnown RBP12.83□□□□□ -0.36
MCPH1-207ENST00000522905 SLC4A8Q2Y0W8 1093 aa12.83□□□□□ -0.36
MCPH1-207ENST00000522905 CC2D2BQ6DHV5 1058 aa12.83□□□□□ -0.36
MCPH1-207ENST00000522905 POTEEQ6S8J3 1075 aa12.83□□□□□ -0.36
MCPH1-207ENST00000522905 IL17REQ8NFR9 667 aa12.83□□□□□ -0.36
MCPH1-207ENST00000522905 STK32AQ8WU08 396 aa12.83□□□□□ -0.36
MCPH1-207ENST00000522905 CASKIN2Q8WXE0 1202 aa12.83□□□□□ -0.36
MCPH1-207ENST00000522905 PTPRN2Q92932 1015 aa12.83□□□□□ -0.36
MCPH1-207ENST00000522905 RMDN2Q96LZ7 410 aa12.83□□□□□ -0.36
MCPH1-207ENST00000522905 LZTS2Q9BRK4 669 aa12.83□□□□□ -0.36
MCPH1-207ENST00000522905 TMEM109Q9BVC6 243 aa12.83□□□□□ -0.36
MCPH1-207ENST00000522905 FAM114A2Q9NRY5 505 aa12.83□□□□□ -0.36
MCPH1-207ENST00000522905 DNAAF2Q9NVR5 837 aaKnown RBP12.83□□□□□ -0.36
MCPH1-207ENST00000522905 PAG1Q9NWQ8 432 aa12.83□□□□□ -0.36
MCPH1-207ENST00000522905 PNPLA7Q6ZV29 1317 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms