RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 RABGGTAQ92696 567 aa17.72■□□□□ 0.43
USP42-207ENST00000521713 NLRC4Q9NPP4 1024 aa17.72■□□□□ 0.43
USP42-207ENST00000521713 SNAP23O00161 211 aa17.72■□□□□ 0.43
USP42-207ENST00000521713 ARL1P40616 181 aaPredicted RBP17.72■□□□□ 0.43
USP42-207ENST00000521713 CUL4AQ13619 759 aa17.72■□□□□ 0.43
USP42-207ENST00000521713 RIOK1Q9BRS2 568 aaKnown RBP17.72■□□□□ 0.43
USP42-207ENST00000521713 UTYO14607 1347 aa17.72■□□□□ 0.43
USP42-207ENST00000521713 USP17L5A8MUK1 530 aa17.72■□□□□ 0.43
USP42-207ENST00000521713 MYL1P05976 194 aa17.72■□□□□ 0.43
USP42-207ENST00000521713 HOXA7P31268 230 aaPredicted RBP17.72■□□□□ 0.43
USP42-207ENST00000521713 RNF168Q8IYW5 571 aaPredicted RBP17.72■□□□□ 0.43
USP42-207ENST00000521713 OR8K1Q8NGG5 319 aa17.72■□□□□ 0.43
USP42-207ENST00000521713 CD2APQ9Y5K6 639 aa17.72■□□□□ 0.43
USP42-207ENST00000521713 CACNB3P54284 484 aa17.71■□□□□ 0.43
USP42-207ENST00000521713 LSM14BQ9BX40 385 aaKnown RBP17.71■□□□□ 0.43
USP42-207ENST00000521713 NEXMIFQ5QGS0 1516 aa17.71■□□□□ 0.43
USP42-207ENST00000521713 ALX1Q15699 326 aa17.71■□□□□ 0.43
USP42-207ENST00000521713 PPP1R12CQ9BZL4 782 aa17.71■□□□□ 0.43
USP42-207ENST00000521713 SLC39A2Q9NP94 309 aa17.71■□□□□ 0.43
USP42-207ENST00000521713 NDC80O14777 642 aa17.71■□□□□ 0.43
USP42-207ENST00000521713 FOXO4P98177 505 aa17.71■□□□□ 0.43
USP42-207ENST00000521713 AP3B2Q13367 1082 aa17.71■□□□□ 0.43
USP42-207ENST00000521713 RABL6Q3YEC7 729 aaPredicted RBP17.71■□□□□ 0.43
USP42-207ENST00000521713 SPATA1Q5VX52 437 aa17.71■□□□□ 0.43
USP42-207ENST00000521713 NSMCE1Q8WV22 266 aa17.71■□□□□ 0.43
USP42-207ENST00000521713 POMGNT1Q8WZA1 660 aa17.71■□□□□ 0.43
USP42-207ENST00000521713 SH3GLB2Q9NR46 395 aa17.71■□□□□ 0.43
USP42-207ENST00000521713 HESX1Q9UBX0 185 aa17.71■□□□□ 0.43
USP42-207ENST00000521713 RAB3IPQ96QF0 476 aaPredicted RBP17.71■□□□□ 0.42
USP42-207ENST00000521713 RPS6KC1Q96S38 1066 aa17.71■□□□□ 0.42
USP42-207ENST00000521713 WRNIP1Q96S55 665 aa17.71■□□□□ 0.42
USP42-207ENST00000521713 DCP1AQ9NPI6 582 aaPredicted RBP17.71■□□□□ 0.42
USP42-207ENST00000521713 ZC3H13Q5T200 1668 aaKnown RBP17.7■□□□□ 0.42
USP42-207ENST00000521713 HNRNPDLO14979 420 aaKnown RBP17.7■□□□□ 0.42
USP42-207ENST00000521713 CCDC25Q86WR0 208 aa17.7■□□□□ 0.42
USP42-207ENST00000521713 ZNF34Q8IZ26 560 aa17.7■□□□□ 0.42
USP42-207ENST00000521713 MCUR1Q96AQ8 359 aa17.7■□□□□ 0.42
USP42-207ENST00000521713 FAM84BQ96KN1 310 aaPredicted RBP17.7■□□□□ 0.42
USP42-207ENST00000521713 SERPINA10Q9UK55 444 aa17.7■□□□□ 0.42
USP42-207ENST00000521713 LRRC7Q96NW7 1537 aa17.7■□□□□ 0.42
USP42-207ENST00000521713 SAR1BQ9Y6B6 198 aa17.7■□□□□ 0.42
USP42-207ENST00000521713 NDUFA8P51970 172 aa17.7■□□□□ 0.42
USP42-207ENST00000521713 RCAN1P53805 252 aa17.7■□□□□ 0.42
USP42-207ENST00000521713 LRRC8AQ8IWT6 810 aa17.7■□□□□ 0.42
USP42-207ENST00000521713 MAIP1Q8WWC4 291 aa17.7■□□□□ 0.42
USP42-207ENST00000521713 CEP170P1Q96L14 293 aa17.7■□□□□ 0.42
USP42-207ENST00000521713 DDX23Q9BUQ8 820 aaKnown RBP17.7■□□□□ 0.42
USP42-207ENST00000521713 BAIAP2L1Q9UHR4 511 aa17.7■□□□□ 0.42
USP42-207ENST00000521713 CASQ2O14958 399 aaPredicted RBP17.7■□□□□ 0.42
USP42-207ENST00000521713 GNGT1P63211 74 aa17.7■□□□□ 0.42
USP42-207ENST00000521713 LRMPQ12912 555 aa17.7■□□□□ 0.42
USP42-207ENST00000521713 CCDC63Q8NA47 563 aa17.7■□□□□ 0.42
USP42-207ENST00000521713 SLC16A10Q8TF71 515 aa17.7■□□□□ 0.42
USP42-207ENST00000521713 CAPS2Q9BXY5 557 aa17.7■□□□□ 0.42
USP42-207ENST00000521713 WDR19Q8NEZ3 1342 aa17.69■□□□□ 0.42
USP42-207ENST00000521713 RIPOR2Q9Y4F9 1068 aa17.69■□□□□ 0.42
USP42-207ENST00000521713 CAMTA2O94983 1202 aa17.69■□□□□ 0.42
USP42-207ENST00000521713 CCDC62Q6P9F0 684 aa17.69■□□□□ 0.42
USP42-207ENST00000521713 ST7Q9NRC1 585 aa17.69■□□□□ 0.42
USP42-207ENST00000521713 FEM1BQ9UK73 627 aa17.69■□□□□ 0.42
USP42-207ENST00000521713 AKT3Q9Y243 479 aa17.69■□□□□ 0.42
USP42-207ENST00000521713 ZHX2Q9Y6X8 837 aa17.69■□□□□ 0.42
USP42-207ENST00000521713 PSAPP07602 524 aa17.69■□□□□ 0.42
USP42-207ENST00000521713 PRR5LQ6MZQ0 368 aa17.69■□□□□ 0.42
USP42-207ENST00000521713 MICAL1Q8TDZ2 1067 aa17.69■□□□□ 0.42
USP42-207ENST00000521713 CCDC127Q96BQ5 260 aa17.69■□□□□ 0.42
USP42-207ENST00000521713 HERC5Q9UII4 1024 aaKnown RBP17.69■□□□□ 0.42
USP42-207ENST00000521713 ZNRF3Q9ULT6 936 aa17.69■□□□□ 0.42
USP42-207ENST00000521713 SETD1BQ9UPS6 1966 aaKnown RBP17.69■□□□□ 0.42
USP42-207ENST00000521713 FDX1P10109 184 aa17.69■□□□□ 0.42
USP42-207ENST00000521713 PPP2R5EQ16537 467 aa17.69■□□□□ 0.42
USP42-207ENST00000521713 RNF207Q6ZRF8 634 aa17.69■□□□□ 0.42
USP42-207ENST00000521713 TMTC3Q6ZXV5 915 aa17.69■□□□□ 0.42
USP42-207ENST00000521713 ABI1Q8IZP0 508 aa17.69■□□□□ 0.42
USP42-207ENST00000521713 SLF1Q9BQI6 1058 aa17.69■□□□□ 0.42
USP42-207ENST00000521713 ANO3Q9BYT9 981 aa17.69■□□□□ 0.42
USP42-207ENST00000521713 XPO4Q9C0E2 1151 aaKnown RBP17.69■□□□□ 0.42
USP42-207ENST00000521713 RRP15Q9Y3B9 282 aaKnown RBP17.69■□□□□ 0.42
USP42-207ENST00000521713 DLATP10515 647 aaKnown RBP17.68■□□□□ 0.42
USP42-207ENST00000521713 MAP7Q14244 749 aa17.68■□□□□ 0.42
USP42-207ENST00000521713 GJA10Q969M2 543 aa17.68■□□□□ 0.42
USP42-207ENST00000521713 MMS19Q96T76 1030 aa17.68■□□□□ 0.42
USP42-207ENST00000521713 PARP2Q9UGN5 583 aa17.68■□□□□ 0.42
USP42-207ENST00000521713 USTQ9Y2C2 406 aa17.68■□□□□ 0.42
USP42-207ENST00000521713 USP17L10C9JJH3 530 aa17.68■□□□□ 0.42
USP42-207ENST00000521713 INO80B-WBP1J3KQ70 363 aa17.68■□□□□ 0.42
USP42-207ENST00000521713 RBBP5Q15291 538 aaKnown RBP17.68■□□□□ 0.42
USP42-207ENST00000521713 RPAINQ86UA6 219 aa17.68■□□□□ 0.42
USP42-207ENST00000521713 INO80BQ9C086 356 aaPredicted RBP17.68■□□□□ 0.42
USP42-207ENST00000521713 HIP1RO75146 1068 aa17.68■□□□□ 0.42
USP42-207ENST00000521713 RNF40O75150 1001 aa17.68■□□□□ 0.42
USP42-207ENST00000521713 TMEM47Q9BQJ4 181 aa17.68■□□□□ 0.42
USP42-207ENST00000521713 RIC8AQ9NPQ8 531 aa17.68■□□□□ 0.42
USP42-207ENST00000521713 A0A087WUV0 522 aaPredicted RBP17.67■□□□□ 0.42
USP42-207ENST00000521713 POLR2BP30876 1174 aaKnown RBP17.67■□□□□ 0.42
USP42-207ENST00000521713 SEPT2Q15019 361 aa17.67■□□□□ 0.42
USP42-207ENST00000521713 RPS6KA1Q15418 735 aa17.67■□□□□ 0.42
USP42-207ENST00000521713 EXOC4Q96A65 974 aa17.67■□□□□ 0.42
USP42-207ENST00000521713 DHTKD1Q96HY7 919 aaPredicted RBP17.67■□□□□ 0.42
USP42-207ENST00000521713 ACCSQ96QU6 501 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms