RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 PTPN21Q16825 1174 aa20.69■□□□□ 0.9
TRAPPC9-210ENST00000521667 NBPF12Q5TAG4 269 aaPredicted RBP20.69■□□□□ 0.9
TRAPPC9-210ENST00000521667 SPECC1LQ69YQ0 1117 aa20.69■□□□□ 0.9
TRAPPC9-210ENST00000521667 SAMD1Q6SPF0 538 aaPredicted RBP20.69■□□□□ 0.9
TRAPPC9-210ENST00000521667 KCNK18Q7Z418 384 aa20.69■□□□□ 0.9
TRAPPC9-210ENST00000521667 FCHSD1Q86WN1 690 aa20.69■□□□□ 0.9
TRAPPC9-210ENST00000521667 ADD3Q9UEY8 706 aaKnown RBP20.69■□□□□ 0.9
TRAPPC9-210ENST00000521667 R3HCC1Q9Y3T6 440 aaKnown RBP20.69■□□□□ 0.9
TRAPPC9-210ENST00000521667 INPP5BP32019 993 aa20.68■□□□□ 0.9
TRAPPC9-210ENST00000521667 TBX2Q13207 712 aaPredicted RBP20.68■□□□□ 0.9
TRAPPC9-210ENST00000521667 FILIP1LQ4L180 1135 aa20.68■□□□□ 0.9
TRAPPC9-210ENST00000521667 DCAF15Q66K64 600 aa20.68■□□□□ 0.9
TRAPPC9-210ENST00000521667 CNNM4Q6P4Q7 775 aa20.68■□□□□ 0.9
TRAPPC9-210ENST00000521667 LDHDQ86WU2 507 aa20.68■□□□□ 0.9
TRAPPC9-210ENST00000521667 DHTKD1Q96HY7 919 aaPredicted RBP20.68■□□□□ 0.9
TRAPPC9-210ENST00000521667 UIMC1Q96RL1 719 aa20.68■□□□□ 0.9
TRAPPC9-210ENST00000521667 LIMA1Q9UHB6 759 aaKnown RBP20.68■□□□□ 0.9
TRAPPC9-210ENST00000521667 ATAD5Q96QE3 1844 aa20.68■□□□□ 0.9
TRAPPC9-210ENST00000521667 PVALEFA0A1B0GWK0 134 aa20.68■□□□□ 0.9
TRAPPC9-210ENST00000521667 PPP1R2P41236 205 aa20.68■□□□□ 0.9
TRAPPC9-210ENST00000521667 UNC13DQ70J99 1090 aa20.68■□□□□ 0.9
TRAPPC9-210ENST00000521667 TBC1D5Q92609 795 aa20.68■□□□□ 0.9
TRAPPC9-210ENST00000521667 FAM20AQ96MK3 541 aa20.68■□□□□ 0.9
TRAPPC9-210ENST00000521667 RNF181Q9P0P0 153 aa20.68■□□□□ 0.9
TRAPPC9-210ENST00000521667 ZNF76P36508 570 aa20.67■□□□□ 0.9
TRAPPC9-210ENST00000521667 STK4Q13043 487 aa20.67■□□□□ 0.9
TRAPPC9-210ENST00000521667 APOBEC3FQ8IUX4 373 aaKnown RBP20.67■□□□□ 0.9
TRAPPC9-210ENST00000521667 TRIM49BA6NDI0 452 aa20.66■□□□□ 0.9
TRAPPC9-210ENST00000521667 LRRC10BA6NIK2 292 aa20.66■□□□□ 0.9
TRAPPC9-210ENST00000521667 SPIRE1Q08AE8 756 aa20.66■□□□□ 0.9
TRAPPC9-210ENST00000521667 COBLL1Q53SF7 1204 aa20.66■□□□□ 0.9
TRAPPC9-210ENST00000521667 ANGEL2Q5VTE6 544 aaKnown RBP20.66■□□□□ 0.9
TRAPPC9-210ENST00000521667 PRPF38AQ8NAV1 312 aaKnown RBP20.66■□□□□ 0.9
TRAPPC9-210ENST00000521667 ANKRD20A12PQ8NF67 263 aa20.66■□□□□ 0.9
TRAPPC9-210ENST00000521667 HOOK2Q96ED9 719 aa20.66■□□□□ 0.9
TRAPPC9-210ENST00000521667 SLF1Q9BQI6 1058 aa20.66■□□□□ 0.9
TRAPPC9-210ENST00000521667 ICAM1P05362 532 aa20.66■□□□□ 0.9
TRAPPC9-210ENST00000521667 FCER1AP12319 257 aa20.66■□□□□ 0.9
TRAPPC9-210ENST00000521667 STAT3P40763 770 aa20.66■□□□□ 0.9
TRAPPC9-210ENST00000521667 PMS1P54277 932 aaKnown RBP20.66■□□□□ 0.9
TRAPPC9-210ENST00000521667 KRT31Q15323 416 aa20.66■□□□□ 0.9
TRAPPC9-210ENST00000521667 TCP11X2Q5H9J9 407 aa20.66■□□□□ 0.9
TRAPPC9-210ENST00000521667 HAUS3Q68CZ6 603 aa20.66■□□□□ 0.9
TRAPPC9-210ENST00000521667 CCDC112Q8NEF3 446 aa20.66■□□□□ 0.9
TRAPPC9-210ENST00000521667 EHMT1Q9H9B1 1298 aa20.66■□□□□ 0.9
TRAPPC9-210ENST00000521667 GPRC5DQ9NZD1 345 aa20.66■□□□□ 0.9
TRAPPC9-210ENST00000521667 KCNJ18B7U540 433 aa20.65■□□□□ 0.9
TRAPPC9-210ENST00000521667 MSH4O15457 936 aa20.65■□□□□ 0.9
TRAPPC9-210ENST00000521667 TEX33O43247 280 aa20.65■□□□□ 0.9
TRAPPC9-210ENST00000521667 KCNJ12Q14500 433 aa20.65■□□□□ 0.9
TRAPPC9-210ENST00000521667 DYMQ7RTS9 669 aa20.65■□□□□ 0.9
TRAPPC9-210ENST00000521667 GPC2Q8N158 579 aa20.65■□□□□ 0.9
TRAPPC9-210ENST00000521667 TRPM4Q8TD43 1214 aa20.65■□□□□ 0.9
TRAPPC9-210ENST00000521667 DDX12PQ92771 950 aa20.65■□□□□ 0.9
TRAPPC9-210ENST00000521667 KIAA1024Q9UPX6 916 aa20.65■□□□□ 0.9
TRAPPC9-210ENST00000521667 DDNO94850 711 aaPredicted RBP20.65■□□□□ 0.9
TRAPPC9-210ENST00000521667 CCNE1P24864 410 aa20.65■□□□□ 0.9
TRAPPC9-210ENST00000521667 EPS15P42566 896 aa20.65■□□□□ 0.9
TRAPPC9-210ENST00000521667 KCNJ6P48051 423 aa20.65■□□□□ 0.9
TRAPPC9-210ENST00000521667 TERF1P54274 439 aa20.65■□□□□ 0.9
TRAPPC9-210ENST00000521667 TTI2Q6NXR4 508 aa20.65■□□□□ 0.9
TRAPPC9-210ENST00000521667 ERMNQ8TAM6 284 aa20.65■□□□□ 0.9
TRAPPC9-210ENST00000521667 TRIM47Q96LD4 638 aa20.65■□□□□ 0.9
TRAPPC9-210ENST00000521667 KCND1Q9NSA2 647 aa20.65■□□□□ 0.9
TRAPPC9-210ENST00000521667 ZNF112Q9UJU3 913 aa20.65■□□□□ 0.9
TRAPPC9-210ENST00000521667 CCPG1Q9ULG6 757 aa20.65■□□□□ 0.9
TRAPPC9-210ENST00000521667 STK24Q9Y6E0 443 aa20.65■□□□□ 0.9
TRAPPC9-210ENST00000521667 ZNF536O15090 1300 aa20.64■□□□□ 0.89
TRAPPC9-210ENST00000521667 IGLV3-22A0A075B6J6 115 aa20.64■□□□□ 0.89
TRAPPC9-210ENST00000521667 POTEB3A0JP26 581 aa20.64■□□□□ 0.89
TRAPPC9-210ENST00000521667 BICDL2A1A5D9 508 aa20.64■□□□□ 0.89
TRAPPC9-210ENST00000521667 POTECB2RU33 542 aa20.64■□□□□ 0.89
TRAPPC9-210ENST00000521667 PBX1P40424 430 aa20.64■□□□□ 0.89
TRAPPC9-210ENST00000521667 POTEBQ6S5H4 581 aa20.64■□□□□ 0.89
TRAPPC9-210ENST00000521667 SCYL3Q8IZE3 742 aa20.64■□□□□ 0.89
TRAPPC9-210ENST00000521667 KIAA0895Q8NCT3 520 aa20.64■□□□□ 0.89
TRAPPC9-210ENST00000521667 CYP2W1Q8TAV3 490 aa20.64■□□□□ 0.89
TRAPPC9-210ENST00000521667 NOC3LQ8WTT2 800 aaKnown RBP20.64■□□□□ 0.89
TRAPPC9-210ENST00000521667 P2RX5Q93086 422 aa20.64■□□□□ 0.89
TRAPPC9-210ENST00000521667 AGBL1Q96MI9 1066 aa20.64■□□□□ 0.89
TRAPPC9-210ENST00000521667 TMX1Q9H3N1 280 aa20.64■□□□□ 0.89
TRAPPC9-210ENST00000521667 THAP9Q9H5L6 903 aa20.64■□□□□ 0.89
TRAPPC9-210ENST00000521667 MED24O75448 989 aa20.63■□□□□ 0.89
TRAPPC9-210ENST00000521667 HOXA7P31268 230 aaPredicted RBP20.63■□□□□ 0.89
TRAPPC9-210ENST00000521667 USP14P54578 494 aa20.63■□□□□ 0.89
TRAPPC9-210ENST00000521667 MTMR2Q13614 643 aa20.63■□□□□ 0.89
TRAPPC9-210ENST00000521667 C9orf131Q5VYM1 1079 aa20.63■□□□□ 0.89
TRAPPC9-210ENST00000521667 NCAPH2Q6IBW4 605 aa20.63■□□□□ 0.89
TRAPPC9-210ENST00000521667 IRF2BP1Q8IU81 584 aa20.63■□□□□ 0.89
TRAPPC9-210ENST00000521667 TANGO6Q9C0B7 1094 aa20.63■□□□□ 0.89
TRAPPC9-210ENST00000521667 E9PMD0 336 aa20.63■□□□□ 0.89
TRAPPC9-210ENST00000521667 IDEP14735 1019 aa20.63■□□□□ 0.89
TRAPPC9-210ENST00000521667 COPB1P53618 953 aaKnown RBP20.63■□□□□ 0.89
TRAPPC9-210ENST00000521667 DGKZQ13574 1117 aa20.63■□□□□ 0.89
TRAPPC9-210ENST00000521667 HPS3Q969F9 1004 aa20.63■□□□□ 0.89
TRAPPC9-210ENST00000521667 WDR18Q9BV38 432 aa20.63■□□□□ 0.89
TRAPPC9-210ENST00000521667 SLC39A2Q9NP94 309 aa20.63■□□□□ 0.89
TRAPPC9-210ENST00000521667 BMP2KQ9NSY1 1161 aaPredicted RBP20.63■□□□□ 0.89
TRAPPC9-210ENST00000521667 EMILIN3Q9NT22 766 aa20.63■□□□□ 0.89
TRAPPC9-210ENST00000521667 VAV3Q9UKW4 847 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms