RNA–Protein interactions for RNA: ENST00000521640.5

CTNNA1-228, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-228ENST00000521640 MYL5Q02045 173 aa7.61□□□□□ -1.19
CTNNA1-228ENST00000521640 CENPCQ03188 943 aa7.61□□□□□ -1.19
CTNNA1-228ENST00000521640 POSTNQ15063 836 aa7.61□□□□□ -1.19
CTNNA1-228ENST00000521640 DPCR1Q3MIW9 517 aa7.61□□□□□ -1.19
CTNNA1-228ENST00000521640 GPATCH4Q5T3I0 446 aaKnown RBP7.61□□□□□ -1.19
CTNNA1-228ENST00000521640 LYSMD3Q7Z3D4 306 aa7.61□□□□□ -1.19
CTNNA1-228ENST00000521640 KRT25Q7Z3Z0 450 aa7.61□□□□□ -1.19
CTNNA1-228ENST00000521640 METTL16Q86W50 562 aaKnown RBP7.61□□□□□ -1.19
CTNNA1-228ENST00000521640 CMTR1Q8N1G2 835 aaKnown RBP7.61□□□□□ -1.19
CTNNA1-228ENST00000521640 CERS5Q8N5B7 392 aa7.61□□□□□ -1.19
CTNNA1-228ENST00000521640 SLC16A10Q8TF71 515 aa7.61□□□□□ -1.19
CTNNA1-228ENST00000521640 C7orf43Q8WVR3 580 aa7.61□□□□□ -1.19
CTNNA1-228ENST00000521640 RRP36Q96EU6 259 aaKnown RBP7.61□□□□□ -1.19
CTNNA1-228ENST00000521640 DYNLL2Q96FJ2 89 aa7.61□□□□□ -1.19
CTNNA1-228ENST00000521640 CAMKK2Q96RR4 588 aa7.61□□□□□ -1.19
CTNNA1-228ENST00000521640 GTPBP4Q9BZE4 634 aaKnown RBP7.61□□□□□ -1.19
CTNNA1-228ENST00000521640 TRIM5Q9C035 493 aa7.61□□□□□ -1.19
CTNNA1-228ENST00000521640 FHDC1Q9C0D6 1143 aaPredicted RBP7.61□□□□□ -1.19
CTNNA1-228ENST00000521640 GLT8D2Q9H1C3 349 aa7.61□□□□□ -1.19
CTNNA1-228ENST00000521640 RIOX1Q9H6W3 641 aa7.61□□□□□ -1.19
CTNNA1-228ENST00000521640 MAGEF1Q9HAY2 307 aa7.61□□□□□ -1.19
CTNNA1-228ENST00000521640 MTMR4Q9NYA4 1195 aa7.61□□□□□ -1.19
CTNNA1-228ENST00000521640 SLX4Q8IY92 1834 aa7.61□□□□□ -1.19
CTNNA1-228ENST00000521640 SIPA1L1O43166 1804 aa7.6□□□□□ -1.19
CTNNA1-228ENST00000521640 TMEM229AB2RXF0 380 aa7.6□□□□□ -1.19
CTNNA1-228ENST00000521640 KLRF2D3W0D1 207 aa7.6□□□□□ -1.19
CTNNA1-228ENST00000521640 STXBP3O00186 592 aa7.6□□□□□ -1.19
CTNNA1-228ENST00000521640 CBFA2T2O43439 604 aa7.6□□□□□ -1.19
CTNNA1-228ENST00000521640 ENTPD3O75355 529 aa7.6□□□□□ -1.19
CTNNA1-228ENST00000521640 TTLL1O95922 423 aa7.6□□□□□ -1.19
CTNNA1-228ENST00000521640 ERCC5P28715 1186 aaPredicted RBP7.6□□□□□ -1.19
CTNNA1-228ENST00000521640 TXLNAP40222 546 aa7.6□□□□□ -1.19
CTNNA1-228ENST00000521640 CRKP46108 304 aa7.6□□□□□ -1.19
CTNNA1-228ENST00000521640 GDF10P55107 478 aa7.6□□□□□ -1.19
CTNNA1-228ENST00000521640 POU4F2Q12837 409 aa7.6□□□□□ -1.19
CTNNA1-228ENST00000521640 LONRF3Q496Y0 759 aa7.6□□□□□ -1.19
CTNNA1-228ENST00000521640 DACT2Q5SW24 774 aa7.6□□□□□ -1.19
CTNNA1-228ENST00000521640 SOGA3Q5TF21 947 aa7.6□□□□□ -1.19
CTNNA1-228ENST00000521640 MCTP2Q6DN12 878 aa7.6□□□□□ -1.19
CTNNA1-228ENST00000521640 APOBEC3HQ6NTF7 200 aaKnown RBP7.6□□□□□ -1.19
CTNNA1-228ENST00000521640 OLFM4Q6UX06 510 aa7.6□□□□□ -1.19
CTNNA1-228ENST00000521640 CCDC155Q8N6L0 562 aa7.6□□□□□ -1.19
CTNNA1-228ENST00000521640 AOPEPQ8N6M6 819 aa7.6□□□□□ -1.19
CTNNA1-228ENST00000521640 KIAA1524Q8TCG1 905 aa7.6□□□□□ -1.19
CTNNA1-228ENST00000521640 CEP95Q96GE4 821 aa7.6□□□□□ -1.19
CTNNA1-228ENST00000521640 AK8Q96MA6 479 aa7.6□□□□□ -1.19
CTNNA1-228ENST00000521640 CLIC6Q96NY7 704 aa7.6□□□□□ -1.19
CTNNA1-228ENST00000521640 GSDMAQ96QA5 445 aa7.6□□□□□ -1.19
CTNNA1-228ENST00000521640 PSMD1Q99460 953 aa7.6□□□□□ -1.19
CTNNA1-228ENST00000521640 CSRNP2Q9H175 543 aa7.6□□□□□ -1.19
CTNNA1-228ENST00000521640 CUEDC2Q9H467 287 aa7.6□□□□□ -1.19
CTNNA1-228ENST00000521640 C6orf50Q9HD87 102 aa7.6□□□□□ -1.19
CTNNA1-228ENST00000521640 KCND1Q9NSA2 647 aa7.6□□□□□ -1.19
CTNNA1-228ENST00000521640 USP40Q9NVE5 1235 aa7.6□□□□□ -1.19
CTNNA1-228ENST00000521640 SEC63Q9UGP8 760 aaKnown RBP7.6□□□□□ -1.19
CTNNA1-228ENST00000521640 SAP30BPQ9UHR5 308 aaKnown RBP7.6□□□□□ -1.19
CTNNA1-228ENST00000521640 STX8Q9UNK0 236 aa7.6□□□□□ -1.19
CTNNA1-228ENST00000521640 NOD1Q9Y239 953 aa7.6□□□□□ -1.19
CTNNA1-228ENST00000521640 MAFBQ9Y5Q3 323 aaPredicted RBP7.6□□□□□ -1.19
CTNNA1-228ENST00000521640 CCDC194A0A1B0GVG4 234 aa7.59□□□□□ -1.19
CTNNA1-228ENST00000521640 POLR2DO15514 142 aaKnown RBP7.59□□□□□ -1.19
CTNNA1-228ENST00000521640 SLC26A4O43511 780 aa7.59□□□□□ -1.19
CTNNA1-228ENST00000521640 CYTH3O43739 400 aa7.59□□□□□ -1.19
CTNNA1-228ENST00000521640 INHAP05111 366 aa7.59□□□□□ -1.19
CTNNA1-228ENST00000521640 PDHBP11177 359 aa7.59□□□□□ -1.19
CTNNA1-228ENST00000521640 MORC3Q14149 939 aa7.59□□□□□ -1.19
CTNNA1-228ENST00000521640 NCAPHQ15003 741 aa7.59□□□□□ -1.19
CTNNA1-228ENST00000521640 WWC2Q6AWC2 1192 aa7.59□□□□□ -1.19
CTNNA1-228ENST00000521640 CDC42EP5Q6NZY7 148 aa7.59□□□□□ -1.19
CTNNA1-228ENST00000521640 SLC51AQ86UW1 340 aa7.59□□□□□ -1.19
CTNNA1-228ENST00000521640 FOXP4Q8IVH2 680 aaPredicted RBP7.59□□□□□ -1.19
CTNNA1-228ENST00000521640 NPAS3Q8IXF0 933 aa7.59□□□□□ -1.19
CTNNA1-228ENST00000521640 RTKN2Q8IZC4 609 aa7.59□□□□□ -1.19
CTNNA1-228ENST00000521640 STAG2Q8N3U4 1231 aa7.59□□□□□ -1.19
CTNNA1-228ENST00000521640 IQUBQ8NA54 791 aa7.59□□□□□ -1.19
CTNNA1-228ENST00000521640 SLC44A5Q8NCS7 719 aa7.59□□□□□ -1.19
CTNNA1-228ENST00000521640 CCDC150Q8NCX0 1101 aa7.59□□□□□ -1.19
CTNNA1-228ENST00000521640 ENOX1Q8TC92 643 aaKnown RBP7.59□□□□□ -1.19
CTNNA1-228ENST00000521640 SMARCE1Q969G3 411 aa7.59□□□□□ -1.19
CTNNA1-228ENST00000521640 MKL1Q969V6 931 aa7.59□□□□□ -1.19
CTNNA1-228ENST00000521640 CCDC97Q96F63 343 aaPredicted RBP7.59□□□□□ -1.19
CTNNA1-228ENST00000521640 NAP1L4Q99733 375 aaKnown RBP7.59□□□□□ -1.19
CTNNA1-228ENST00000521640 PPP1R12CQ9BZL4 782 aa7.59□□□□□ -1.19
CTNNA1-228ENST00000521640 CCSER1Q9C0I3 900 aa7.59□□□□□ -1.19
CTNNA1-228ENST00000521640 NYAP2Q9P242 653 aa7.59□□□□□ -1.19
CTNNA1-228ENST00000521640 PI4KBQ9UBF8 816 aa7.59□□□□□ -1.19
CTNNA1-228ENST00000521640 CLIP2Q9UDT6 1046 aa7.59□□□□□ -1.19
CTNNA1-228ENST00000521640 KIAA1024Q9UPX6 916 aa7.59□□□□□ -1.19
CTNNA1-228ENST00000521640 PCDHA5Q9Y5H7 936 aa7.59□□□□□ -1.19
CTNNA1-228ENST00000521640 ARFGEF1Q9Y6D6 1849 aa7.59□□□□□ -1.19
CTNNA1-228ENST00000521640 SCN9AQ15858 1988 aa7.59□□□□□ -1.2
CTNNA1-228ENST00000521640 ADAMTSL1Q8N6G6 1762 aa7.59□□□□□ -1.2
CTNNA1-228ENST00000521640 LZTS3O60299 673 aaPredicted RBP7.58□□□□□ -1.2
CTNNA1-228ENST00000521640 ECE2O60344 883 aa7.58□□□□□ -1.2
CTNNA1-228ENST00000521640 TPM2P07951 284 aa7.58□□□□□ -1.2
CTNNA1-228ENST00000521640 SHMT1P34896 483 aa7.58□□□□□ -1.2
CTNNA1-228ENST00000521640 PPP1R2P41236 205 aa7.58□□□□□ -1.2
CTNNA1-228ENST00000521640 CLDN10P78369 228 aa7.58□□□□□ -1.2
CTNNA1-228ENST00000521640 ZNF543Q08ER8 600 aa7.58□□□□□ -1.2
CTNNA1-228ENST00000521640 NONOQ15233 471 aaKnown RBP eCLIP7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms