RNA–Protein interactions for RNA: ENST00000521516.5

HMBOX1-208, Transcript of homeobox containing 1, humanhuman

TSL 2

Gene HMBOX1, Length 2,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-208ENST00000521516 IL17RAQ96F46 866 aa9.17□□□□□ -0.94
HMBOX1-208ENST00000521516 RTKNQ9BST9 563 aa9.17□□□□□ -0.94
HMBOX1-208ENST00000521516 PLVAPQ9BX97 442 aa9.17□□□□□ -0.94
HMBOX1-208ENST00000521516 MFSD1Q9H3U5 465 aa9.17□□□□□ -0.94
HMBOX1-208ENST00000521516 MCM9Q9NXL9 1143 aa9.17□□□□□ -0.94
HMBOX1-208ENST00000521516 CEP295Q9C0D2 2601 aa9.17□□□□□ -0.94
HMBOX1-208ENST00000521516 RAD50Q92878 1312 aa9.16□□□□□ -0.94
HMBOX1-208ENST00000521516 NKRFO15226 690 aaKnown RBP eCLIP9.16□□□□□ -0.94
HMBOX1-208ENST00000521516 NPR3P17342 541 aa9.16□□□□□ -0.94
HMBOX1-208ENST00000521516 ZAP70P43403 619 aa9.16□□□□□ -0.94
HMBOX1-208ENST00000521516 PTK7Q13308 1070 aa9.16□□□□□ -0.94
HMBOX1-208ENST00000521516 DYNLL2Q96FJ2 89 aa9.16□□□□□ -0.94
HMBOX1-208ENST00000521516 RC3H2Q9HBD1 1191 aaKnown RBP9.16□□□□□ -0.94
HMBOX1-208ENST00000521516 PLAGL2Q9UPG8 496 aa9.16□□□□□ -0.94
HMBOX1-208ENST00000521516 FRYQ5TBA9 3013 aa9.16□□□□□ -0.94
HMBOX1-208ENST00000521516 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.16□□□□□ -0.94
HMBOX1-208ENST00000521516 PRR5-ARHGAP8B1AHC4 643 aa9.16□□□□□ -0.94
HMBOX1-208ENST00000521516 CYP2D6P10635 497 aa9.16□□□□□ -0.94
HMBOX1-208ENST00000521516 ARHGAP8P85298 464 aa9.16□□□□□ -0.94
HMBOX1-208ENST00000521516 CRIPAKQ8N1N5 446 aa9.16□□□□□ -0.94
HMBOX1-208ENST00000521516 SUMF1Q8NBK3 374 aa9.16□□□□□ -0.94
HMBOX1-208ENST00000521516 WNT8BQ93098 351 aa9.16□□□□□ -0.94
HMBOX1-208ENST00000521516 RTP3Q9BQQ7 232 aa9.16□□□□□ -0.94
HMBOX1-208ENST00000521516 S1PR5Q9H228 398 aa9.16□□□□□ -0.94
HMBOX1-208ENST00000521516 SMOC2Q9H3U7 446 aa9.16□□□□□ -0.94
HMBOX1-208ENST00000521516 HOMER2Q9NSB8 354 aa9.16□□□□□ -0.94
HMBOX1-208ENST00000521516 GTF2IRD1Q9UHL9 959 aa9.16□□□□□ -0.94
HMBOX1-208ENST00000521516 CTDP1Q9Y5B0 961 aaPredicted RBP9.16□□□□□ -0.94
HMBOX1-208ENST00000521516 NDUFB10O96000 172 aa9.15□□□□□ -0.94
HMBOX1-208ENST00000521516 DNAJB1P25685 340 aa9.15□□□□□ -0.94
HMBOX1-208ENST00000521516 NRIP1P48552 1158 aa9.15□□□□□ -0.94
HMBOX1-208ENST00000521516 DMWDQ09019 674 aa9.15□□□□□ -0.94
HMBOX1-208ENST00000521516 TTC39AQ5SRH9 613 aa9.15□□□□□ -0.94
HMBOX1-208ENST00000521516 GPR161Q8N6U8 529 aaKnown RBP9.15□□□□□ -0.94
HMBOX1-208ENST00000521516 P2RX5Q93086 422 aa9.15□□□□□ -0.94
HMBOX1-208ENST00000521516 RNF146Q9NTX7 359 aa9.15□□□□□ -0.94
HMBOX1-208ENST00000521516 FANCMQ8IYD8 2048 aa9.15□□□□□ -0.94
HMBOX1-208ENST00000521516 LOC102724159A0A0B4J2E5 919 aa9.15□□□□□ -0.95
HMBOX1-208ENST00000521516 DCDC2BA2VCK2 349 aa9.15□□□□□ -0.95
HMBOX1-208ENST00000521516 UPP2O95045 317 aa9.15□□□□□ -0.95
HMBOX1-208ENST00000521516 PWP2Q15269 919 aaKnown RBP9.15□□□□□ -0.95
HMBOX1-208ENST00000521516 TKFCQ3LXA3 575 aa9.15□□□□□ -0.95
HMBOX1-208ENST00000521516 KAT2BQ92831 832 aa9.15□□□□□ -0.95
HMBOX1-208ENST00000521516 KIFC2Q96AC6 838 aa9.15□□□□□ -0.95
HMBOX1-208ENST00000521516 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.15□□□□□ -0.95
HMBOX1-208ENST00000521516 IFIH1Q9BYX4 1025 aaKnown RBP9.15□□□□□ -0.95
HMBOX1-208ENST00000521516 DCP1AQ9NPI6 582 aaPredicted RBP9.15□□□□□ -0.95
HMBOX1-208ENST00000521516 CYP39A1Q9NYL5 469 aa9.15□□□□□ -0.95
HMBOX1-208ENST00000521516 HDAC5Q9UQL6 1122 aa9.15□□□□□ -0.95
HMBOX1-208ENST00000521516 NR2E1Q9Y466 385 aa9.15□□□□□ -0.95
HMBOX1-208ENST00000521516 MYO10Q9HD67 2058 aa9.14□□□□□ -0.95
HMBOX1-208ENST00000521516 LCTP09848 1927 aa9.14□□□□□ -0.95
HMBOX1-208ENST00000521516 MYH8P13535 1937 aa9.14□□□□□ -0.95
HMBOX1-208ENST00000521516 F5H6K3 240 aa9.14□□□□□ -0.95
HMBOX1-208ENST00000521516 RAD21O60216 631 aa9.14□□□□□ -0.95
HMBOX1-208ENST00000521516 IDH1O75874 414 aaKnown RBP9.14□□□□□ -0.95
HMBOX1-208ENST00000521516 FDX1P10109 184 aa9.14□□□□□ -0.95
HMBOX1-208ENST00000521516 KLRC3Q07444 240 aa9.14□□□□□ -0.95
HMBOX1-208ENST00000521516 COL9A3Q14050 684 aaPredicted RBP9.14□□□□□ -0.95
HMBOX1-208ENST00000521516 NAALADL2Q58DX5 795 aa9.14□□□□□ -0.95
HMBOX1-208ENST00000521516 ZC3H14Q6PJT7 736 aaKnown RBP9.14□□□□□ -0.95
HMBOX1-208ENST00000521516 FLCNQ8NFG4 579 aa9.14□□□□□ -0.95
HMBOX1-208ENST00000521516 VN1R2Q8NFZ6 395 aa9.14□□□□□ -0.95
HMBOX1-208ENST00000521516 SPPL3Q8TCT6 385 aa9.14□□□□□ -0.95
HMBOX1-208ENST00000521516 CDV3Q9UKY7 258 aaKnown RBP9.14□□□□□ -0.95
HMBOX1-208ENST00000521516 ADGRA3Q8IWK6 1321 aa9.14□□□□□ -0.95
HMBOX1-208ENST00000521516 CDK8P49336 464 aa9.13□□□□□ -0.95
HMBOX1-208ENST00000521516 LMNB2Q03252 620 aa9.13□□□□□ -0.95
HMBOX1-208ENST00000521516 MTX1Q13505 466 aa9.13□□□□□ -0.95
HMBOX1-208ENST00000521516 CCDC158Q5M9N0 1113 aa9.13□□□□□ -0.95
HMBOX1-208ENST00000521516 TMEM184AQ6ZMB5 413 aa9.13□□□□□ -0.95
HMBOX1-208ENST00000521516 LRRC47Q8N1G4 583 aaKnown RBP9.13□□□□□ -0.95
HMBOX1-208ENST00000521516 SEPT8Q92599 483 aa9.13□□□□□ -0.95
HMBOX1-208ENST00000521516 CRNKL1Q9BZJ0 848 aaKnown RBP9.13□□□□□ -0.95
HMBOX1-208ENST00000521516 IGSF5Q9NSI5 407 aa9.13□□□□□ -0.95
HMBOX1-208ENST00000521516 FEM1BQ9UK73 627 aa9.13□□□□□ -0.95
HMBOX1-208ENST00000521516 FSD2A1L4K1 749 aa9.13□□□□□ -0.95
HMBOX1-208ENST00000521516 CSPG5O95196 566 aa9.13□□□□□ -0.95
HMBOX1-208ENST00000521516 PPP2R5BQ15173 497 aa9.13□□□□□ -0.95
HMBOX1-208ENST00000521516 NEK1Q96PY6 1258 aa9.13□□□□□ -0.95
HMBOX1-208ENST00000521516 DBNDD2Q9BQY9 259 aa9.13□□□□□ -0.95
HMBOX1-208ENST00000521516 GPR108Q9NPR9 543 aa9.13□□□□□ -0.95
HMBOX1-208ENST00000521516 HDAC6Q9UBN7 1215 aa9.13□□□□□ -0.95
HMBOX1-208ENST00000521516 GREB1LQ9C091 1923 aaPredicted RBP9.12□□□□□ -0.95
HMBOX1-208ENST00000521516 MAGEB6P1A0A0J9YX57 407 aa9.12□□□□□ -0.95
HMBOX1-208ENST00000521516 RSPH10B2B2RC85 870 aa9.12□□□□□ -0.95
HMBOX1-208ENST00000521516 ITGB1P05556 798 aa9.12□□□□□ -0.95
HMBOX1-208ENST00000521516 RSPH10BP0C881 870 aa9.12□□□□□ -0.95
HMBOX1-208ENST00000521516 C16orf86Q6ZW13 317 aa9.12□□□□□ -0.95
HMBOX1-208ENST00000521516 COPS5Q92905 334 aa9.12□□□□□ -0.95
HMBOX1-208ENST00000521516 TRERF1Q96PN7 1200 aa9.12□□□□□ -0.95
HMBOX1-208ENST00000521516 PURBQ96QR8 312 aaKnown RBP9.12□□□□□ -0.95
HMBOX1-208ENST00000521516 NYAP2Q9P242 653 aa9.12□□□□□ -0.95
HMBOX1-208ENST00000521516 C2CD4DB7Z1M9 353 aa9.12□□□□□ -0.95
HMBOX1-208ENST00000521516 E9PSI1 815 aa9.12□□□□□ -0.95
HMBOX1-208ENST00000521516 SRGAP3O43295 1099 aa9.12□□□□□ -0.95
HMBOX1-208ENST00000521516 CHMP4BP1P59074 171 aa9.12□□□□□ -0.95
HMBOX1-208ENST00000521516 RBM10P98175 930 aaKnown RBP9.12□□□□□ -0.95
HMBOX1-208ENST00000521516 KCNC3Q14003 757 aa9.12□□□□□ -0.95
HMBOX1-208ENST00000521516 RBM23Q86U06 439 aaKnown RBP9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms