RNA–Protein interactions for RNA: ENST00000521327.1

SPARC-203, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 864 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-203ENST00000521327 HDAC6Q9UBN7 1215 aa15.87■□□□□ 0.13
SPARC-203ENST00000521327 TCF20Q9UGU0 1960 aaKnown RBP15.87■□□□□ 0.13
SPARC-203ENST00000521327 GJB5O95377 273 aa15.86■□□□□ 0.13
SPARC-203ENST00000521327 PARNO95453 639 aaKnown RBP15.86■□□□□ 0.13
SPARC-203ENST00000521327 CXCL10P02778 98 aa15.86■□□□□ 0.13
SPARC-203ENST00000521327 CDC37Q16543 378 aaPredicted RBP15.86■□□□□ 0.13
SPARC-203ENST00000521327 DGKDQ16760 1214 aa15.86■□□□□ 0.13
SPARC-203ENST00000521327 TCTN1Q2MV58 587 aa15.86■□□□□ 0.13
SPARC-203ENST00000521327 FAM117BQ6P1L5 589 aa15.86■□□□□ 0.13
SPARC-203ENST00000521327 ESR2Q92731 530 aa15.86■□□□□ 0.13
SPARC-203ENST00000521327 KHSRPQ92945 711 aaKnown RBP eCLIP15.86■□□□□ 0.13
SPARC-203ENST00000521327 RMDN3Q96TC7 470 aa15.86■□□□□ 0.13
SPARC-203ENST00000521327 RAD9AQ99638 391 aa15.86■□□□□ 0.13
SPARC-203ENST00000521327 ALG1Q9BT22 464 aa15.86■□□□□ 0.13
SPARC-203ENST00000521327 SUGCTQ9HAC7 445 aa15.86■□□□□ 0.13
SPARC-203ENST00000521327 LMCD1Q9NZU5 365 aa15.86■□□□□ 0.13
SPARC-203ENST00000521327 GTF2IRD1Q9UHL9 959 aa15.86■□□□□ 0.13
SPARC-203ENST00000521327 DDX41Q9UJV9 622 aaKnown RBP15.86■□□□□ 0.13
SPARC-203ENST00000521327 HCN4Q9Y3Q4 1203 aa15.86■□□□□ 0.13
SPARC-203ENST00000521327 LCTP09848 1927 aa15.86■□□□□ 0.13
SPARC-203ENST00000521327 ABHD14A-ACY1A0A1B0GW23 586 aa15.85■□□□□ 0.13
SPARC-203ENST00000521327 PCP11498 1178 aaKnown RBP15.85■□□□□ 0.13
SPARC-203ENST00000521327 PSEN2P49810 448 aa15.85■□□□□ 0.13
SPARC-203ENST00000521327 IKBKEQ14164 716 aa15.85■□□□□ 0.13
SPARC-203ENST00000521327 ARHGEF16Q5VV41 709 aa15.85■□□□□ 0.13
SPARC-203ENST00000521327 DGKHQ86XP1 1220 aa15.85■□□□□ 0.13
SPARC-203ENST00000521327 MCF2L2Q86YR7 1114 aa15.85■□□□□ 0.13
SPARC-203ENST00000521327 ADGRF4Q8IZF3 695 aa15.85■□□□□ 0.13
SPARC-203ENST00000521327 TGS1Q96RS0 853 aaKnown RBP15.85■□□□□ 0.13
SPARC-203ENST00000521327 IWS1Q96ST2 819 aa15.85■□□□□ 0.13
SPARC-203ENST00000521327 RNF41Q9H4P4 317 aaPredicted RBP15.85■□□□□ 0.13
SPARC-203ENST00000521327 SCN10AQ9Y5Y9 1956 aa15.85■□□□□ 0.13
SPARC-203ENST00000521327 ABCB11O95342 1321 aa15.85■□□□□ 0.13
SPARC-203ENST00000521327 ZMYM6O95789 1325 aa15.85■□□□□ 0.13
SPARC-203ENST00000521327 SCN5AQ14524 2016 aa15.84■□□□□ 0.13
SPARC-203ENST00000521327 LINC01553A4QN01 128 aa15.84■□□□□ 0.13
SPARC-203ENST00000521327 EIF2AK2P19525 551 aaKnown RBP15.84■□□□□ 0.13
SPARC-203ENST00000521327 HOXD11P31277 338 aaPredicted RBP15.84■□□□□ 0.13
SPARC-203ENST00000521327 ERVK-21P61565 698 aa15.84■□□□□ 0.13
SPARC-203ENST00000521327 RBL2Q08999 1139 aa15.84■□□□□ 0.13
SPARC-203ENST00000521327 KIAA0753Q2KHM9 967 aa15.84■□□□□ 0.13
SPARC-203ENST00000521327 PNMA1Q8ND90 353 aa15.84■□□□□ 0.13
SPARC-203ENST00000521327 CRBNQ96SW2 442 aa15.84■□□□□ 0.13
SPARC-203ENST00000521327 MAF1Q9H063 256 aa15.84■□□□□ 0.13
SPARC-203ENST00000521327 VAT1LQ9HCJ6 419 aa15.84■□□□□ 0.13
SPARC-203ENST00000521327 CD320Q9NPF0 282 aa15.84■□□□□ 0.13
SPARC-203ENST00000521327 MRVI1Q9Y6F6 885 aa15.84■□□□□ 0.13
SPARC-203ENST00000521327 NEDD4P46934 1319 aa15.84■□□□□ 0.13
SPARC-203ENST00000521327 CCDC171Q6TFL3 1326 aa15.84■□□□□ 0.13
SPARC-203ENST00000521327 FAM86C2PA6NEL3 165 aa15.83■□□□□ 0.12
SPARC-203ENST00000521327 TRIM6-TRIM34B2RNG4 842 aa15.83■□□□□ 0.12
SPARC-203ENST00000521327 DHX16O60231 1041 aaKnown RBP15.83■□□□□ 0.12
SPARC-203ENST00000521327 EIF3JO75822 258 aaKnown RBP15.83■□□□□ 0.12
SPARC-203ENST00000521327 NR3C2P08235 984 aa15.83■□□□□ 0.12
SPARC-203ENST00000521327 ZNF286BP0CG31 522 aa15.83■□□□□ 0.12
SPARC-203ENST00000521327 ZNF200P98182 395 aaPredicted RBP15.83■□□□□ 0.12
SPARC-203ENST00000521327 PTK7Q13308 1070 aa15.83■□□□□ 0.12
SPARC-203ENST00000521327 LAMC2Q13753 1193 aa15.83■□□□□ 0.12
SPARC-203ENST00000521327 MFSD10Q14728 455 aa15.83■□□□□ 0.12
SPARC-203ENST00000521327 QRICH1Q2TAL8 776 aa15.83■□□□□ 0.12
SPARC-203ENST00000521327 ZNF618Q5T7W0 954 aa15.83■□□□□ 0.12
SPARC-203ENST00000521327 TICAM2Q86XR7 235 aa15.83■□□□□ 0.12
SPARC-203ENST00000521327 WNT8BQ93098 351 aa15.83■□□□□ 0.12
SPARC-203ENST00000521327 EMID1Q96A84 441 aaPredicted RBP15.83■□□□□ 0.12
SPARC-203ENST00000521327 KATNAL1Q9BW62 490 aa15.83■□□□□ 0.12
SPARC-203ENST00000521327 KAT14Q9H8E8 782 aa15.83■□□□□ 0.12
SPARC-203ENST00000521327 C11orf16Q9NQ32 467 aa15.83■□□□□ 0.12
SPARC-203ENST00000521327 MRPL11Q9Y3B7 192 aaKnown RBP15.83■□□□□ 0.12
SPARC-203ENST00000521327 ARIH1Q9Y4X5 557 aaPredicted RBP15.83■□□□□ 0.12
SPARC-203ENST00000521327 ZNF213O14771 459 aa15.82■□□□□ 0.12
SPARC-203ENST00000521327 SORBS3O60504 671 aa15.82■□□□□ 0.12
SPARC-203ENST00000521327 GPR37L1O60883 481 aa15.82■□□□□ 0.12
SPARC-203ENST00000521327 EFCAB14O75071 495 aa15.82■□□□□ 0.12
SPARC-203ENST00000521327 KDM4AO75164 1064 aa15.82■□□□□ 0.12
SPARC-203ENST00000521327 MBTPS1Q14703 1052 aa15.82■□□□□ 0.12
SPARC-203ENST00000521327 TRIM71Q2Q1W2 868 aaKnown RBP15.82■□□□□ 0.12
SPARC-203ENST00000521327 TRAF7Q6Q0C0 670 aa15.82■□□□□ 0.12
SPARC-203ENST00000521327 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.82■□□□□ 0.122e-6■■■■□ 20.6
SPARC-203ENST00000521327 IQCA1Q86XH1 822 aa15.82■□□□□ 0.12
SPARC-203ENST00000521327 FBXO11Q86XK2 927 aa15.82■□□□□ 0.12
SPARC-203ENST00000521327 DHX37Q8IY37 1157 aaKnown RBP15.82■□□□□ 0.12
SPARC-203ENST00000521327 PPTC7Q8NI37 304 aa15.82■□□□□ 0.12
SPARC-203ENST00000521327 RILPL2Q969X0 211 aa15.82■□□□□ 0.12
SPARC-203ENST00000521327 UBE2ZQ9H832 354 aaPredicted RBP15.82■□□□□ 0.12
SPARC-203ENST00000521327 JMJD4Q9H9V9 463 aa15.82■□□□□ 0.12
SPARC-203ENST00000521327 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.81■□□□□ 0.12
SPARC-203ENST00000521327 PI4K2BG5E9Z4 385 aa15.81■□□□□ 0.12
SPARC-203ENST00000521327 HAS3O00219 553 aa15.81■□□□□ 0.12
SPARC-203ENST00000521327 LGR5O75473 907 aa15.81■□□□□ 0.12
SPARC-203ENST00000521327 F2P00734 622 aa15.81■□□□□ 0.12
SPARC-203ENST00000521327 CFBP00751 764 aa15.81■□□□□ 0.12
SPARC-203ENST00000521327 KCNA5P22460 613 aa15.81■□□□□ 0.12
SPARC-203ENST00000521327 CCDC178Q5BJE1 867 aa15.81■□□□□ 0.12
SPARC-203ENST00000521327 TET1Q8NFU7 2136 aa15.81■□□□□ 0.12
SPARC-203ENST00000521327 ANKS1AQ92625 1134 aa15.81■□□□□ 0.12
SPARC-203ENST00000521327 ZSCAN10Q96SZ4 725 aaPredicted RBP15.81■□□□□ 0.12
SPARC-203ENST00000521327 C17orf80Q9BSJ5 609 aa15.81■□□□□ 0.12
SPARC-203ENST00000521327 PXMP2Q9NR77 195 aa15.81■□□□□ 0.12
SPARC-203ENST00000521327 INSL6Q9Y581 213 aa15.81■□□□□ 0.12
SPARC-203ENST00000521327 PPFIA4O75335 1185 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms