RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 IRS4O14654 1257 aaPredicted RBP7.44□□□□□ -1.22
SKP1-208ENST00000521216 OPA1O60313 960 aa7.44□□□□□ -1.22
SKP1-208ENST00000521216 DGKIO75912 1065 aa7.44□□□□□ -1.22
SKP1-208ENST00000521216 GLI4P10075 376 aa7.44□□□□□ -1.22
SKP1-208ENST00000521216 GYS2P54840 703 aa7.44□□□□□ -1.22
SKP1-208ENST00000521216 ERVFRD-1P60508 538 aa7.44□□□□□ -1.22
SKP1-208ENST00000521216 MLANAQ16655 118 aa7.44□□□□□ -1.22
SKP1-208ENST00000521216 PLEKHG4Q58EX7 1191 aa7.44□□□□□ -1.22
SKP1-208ENST00000521216 TAF7LQ5H9L4 462 aa7.44□□□□□ -1.22
SKP1-208ENST00000521216 MROH9Q5TGP6 573 aa7.44□□□□□ -1.22
SKP1-208ENST00000521216 PAQR3Q6TCH7 311 aa7.44□□□□□ -1.22
SKP1-208ENST00000521216 PRR23BQ6ZRT6 265 aa7.44□□□□□ -1.22
SKP1-208ENST00000521216 KIAA0907Q7Z7F0 614 aaPredicted RBP7.44□□□□□ -1.22
SKP1-208ENST00000521216 SCLYQ96I15 445 aa7.44□□□□□ -1.22
SKP1-208ENST00000521216 NSUN3Q9H649 340 aaKnown RBP7.44□□□□□ -1.22
SKP1-208ENST00000521216 TRIM39Q9HCM9 518 aa7.44□□□□□ -1.22
SKP1-208ENST00000521216 SIT1Q9Y3P8 196 aa7.44□□□□□ -1.22
SKP1-208ENST00000521216 X6R8D5 127 aa7.44□□□□□ -1.22
SKP1-208ENST00000521216 LRRC10BA6NIK2 292 aa7.43□□□□□ -1.22
SKP1-208ENST00000521216 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.43□□□□□ -1.22
SKP1-208ENST00000521216 CYBBP04839 570 aa7.43□□□□□ -1.22
SKP1-208ENST00000521216 GNAT1P11488 350 aa7.43□□□□□ -1.22
SKP1-208ENST00000521216 COL6A2P12110 1019 aa7.43□□□□□ -1.22
SKP1-208ENST00000521216 SDSP20132 328 aa7.43□□□□□ -1.22
SKP1-208ENST00000521216 DNM2P50570 870 aa7.43□□□□□ -1.22
SKP1-208ENST00000521216 ST5P78524 1137 aa7.43□□□□□ -1.22
SKP1-208ENST00000521216 NR1I3Q14994 352 aa7.43□□□□□ -1.22
SKP1-208ENST00000521216 DALRD3Q5D0E6 543 aaKnown RBP7.43□□□□□ -1.22
SKP1-208ENST00000521216 XP32Q5T750 250 aa7.43□□□□□ -1.22
SKP1-208ENST00000521216 CNNM4Q6P4Q7 775 aa7.43□□□□□ -1.22
SKP1-208ENST00000521216 IRF2BP1Q8IU81 584 aa7.43□□□□□ -1.22
SKP1-208ENST00000521216 NIM1KQ8IY84 436 aa7.43□□□□□ -1.22
SKP1-208ENST00000521216 PCDH19Q8TAB3 1148 aa7.43□□□□□ -1.22
SKP1-208ENST00000521216 EPB41L1Q9H4G0 881 aa7.43□□□□□ -1.22
SKP1-208ENST00000521216 KCNK12Q9HB15 430 aa7.43□□□□□ -1.22
SKP1-208ENST00000521216 CATSPERZQ9NTU4 200 aa7.43□□□□□ -1.22
SKP1-208ENST00000521216 NUDT5Q9UKK9 219 aa7.43□□□□□ -1.22
SKP1-208ENST00000521216 TCRBV16S1A1N1A0A5B0 115 aa7.42□□□□□ -1.22
SKP1-208ENST00000521216 RFPL3O75679 317 aa7.42□□□□□ -1.22
SKP1-208ENST00000521216 MCTP1Q6DN14 999 aa7.42□□□□□ -1.22
SKP1-208ENST00000521216 TMEM132EQ6IEE7 984 aa7.42□□□□□ -1.22
SKP1-208ENST00000521216 RPTNQ6XPR3 784 aa7.42□□□□□ -1.22
SKP1-208ENST00000521216 NETO2Q8NC67 525 aa7.42□□□□□ -1.22
SKP1-208ENST00000521216 NINJ1Q92982 152 aa7.42□□□□□ -1.22
SKP1-208ENST00000521216 FBXW5Q969U6 566 aa7.42□□□□□ -1.22
SKP1-208ENST00000521216 AP5M1Q9H0R1 490 aa7.42□□□□□ -1.22
SKP1-208ENST00000521216 CDIP1Q9H305 208 aa7.42□□□□□ -1.22
SKP1-208ENST00000521216 DCP1AQ9NPI6 582 aaPredicted RBP7.42□□□□□ -1.22
SKP1-208ENST00000521216 FAM53CQ9NYF3 392 aa7.42□□□□□ -1.22
SKP1-208ENST00000521216 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.42□□□□□ -1.22
SKP1-208ENST00000521216 KLHL14Q9P2G3 628 aa7.42□□□□□ -1.22
SKP1-208ENST00000521216 COQ6Q9Y2Z9 468 aa7.42□□□□□ -1.22
SKP1-208ENST00000521216 TNPO3Q9Y5L0 923 aaKnown RBP7.42□□□□□ -1.22
SKP1-208ENST00000521216 HCFC2Q9Y5Z7 792 aa7.42□□□□□ -1.22
SKP1-208ENST00000521216 CADPSQ9ULU8 1353 aa7.42□□□□□ -1.22
SKP1-208ENST00000521216 ARVCFO00192 962 aa7.41□□□□□ -1.22
SKP1-208ENST00000521216 SRGAP3O43295 1099 aa7.41□□□□□ -1.22
SKP1-208ENST00000521216 KCNQ2O43526 872 aa7.41□□□□□ -1.22
SKP1-208ENST00000521216 DNAJC8O75937 253 aaPredicted RBP7.41□□□□□ -1.22
SKP1-208ENST00000521216 PYGMP11217 842 aa7.41□□□□□ -1.22
SKP1-208ENST00000521216 PRR5P85299 388 aa7.41□□□□□ -1.22
SKP1-208ENST00000521216 SPIRE1Q08AE8 756 aa7.41□□□□□ -1.22
SKP1-208ENST00000521216 TMEM62Q0P6H9 643 aa7.41□□□□□ -1.22
SKP1-208ENST00000521216 EGFLAMQ63HQ2 1017 aa7.41□□□□□ -1.22
SKP1-208ENST00000521216 DCP2Q8IU60 420 aaKnown RBP7.41□□□□□ -1.22
SKP1-208ENST00000521216 RIOX2Q8IUF8 465 aa7.41□□□□□ -1.22
SKP1-208ENST00000521216 Q8N1Y9 231 aa7.41□□□□□ -1.22
SKP1-208ENST00000521216 PIP4K2CQ8TBX8 421 aa7.41□□□□□ -1.22
SKP1-208ENST00000521216 PEX11GQ96HA9 241 aa7.41□□□□□ -1.22
SKP1-208ENST00000521216 EPB41L4BQ9H329 900 aa7.41□□□□□ -1.22
SKP1-208ENST00000521216 PLAAQ9Y263 795 aa7.41□□□□□ -1.22
SKP1-208ENST00000521216 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.41□□□□□ -1.22
SKP1-208ENST00000521216 IGFALSP35858 605 aa7.4□□□□□ -1.22
SKP1-208ENST00000521216 NEK4P51957 841 aa7.4□□□□□ -1.22
SKP1-208ENST00000521216 SRSF3P84103 164 aaKnown RBP7.4□□□□□ -1.22
SKP1-208ENST00000521216 ZNF460Q14592 562 aa7.4□□□□□ -1.22
SKP1-208ENST00000521216 FAM47CQ5HY64 1035 aa7.4□□□□□ -1.22
SKP1-208ENST00000521216 STEAP3Q658P3 488 aa7.4□□□□□ -1.22
SKP1-208ENST00000521216 ZC3H14Q6PJT7 736 aaKnown RBP7.4□□□□□ -1.22
SKP1-208ENST00000521216 TMC6Q7Z403 805 aa7.4□□□□□ -1.22
SKP1-208ENST00000521216 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.4□□□□□ -1.22
SKP1-208ENST00000521216 BCAS3Q9H6U6 928 aa7.4□□□□□ -1.22
SKP1-208ENST00000521216 MAGEC2Q9UBF1 373 aaPredicted RBP7.4□□□□□ -1.22
SKP1-208ENST00000521216 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.4□□□□□ -1.22
SKP1-208ENST00000521216 CCDC66A2RUB6 948 aa7.39□□□□□ -1.23
SKP1-208ENST00000521216 KRIT1O00522 736 aa7.39□□□□□ -1.23
SKP1-208ENST00000521216 ABLIM1O14639 778 aa7.39□□□□□ -1.23
SKP1-208ENST00000521216 HGSO14964 777 aaPredicted RBP7.39□□□□□ -1.23
SKP1-208ENST00000521216 GSTA4O15217 222 aa7.39□□□□□ -1.23
SKP1-208ENST00000521216 ASLP04424 464 aa7.39□□□□□ -1.23
SKP1-208ENST00000521216 JMJD7P0C870 316 aa7.39□□□□□ -1.23
SKP1-208ENST00000521216 KRT15P19012 456 aa7.39□□□□□ -1.23
SKP1-208ENST00000521216 FLT3P36888 993 aa7.39□□□□□ -1.23
SKP1-208ENST00000521216 MAPKAPK2P49137 400 aa7.39□□□□□ -1.23
SKP1-208ENST00000521216 CHRNA2Q15822 529 aa7.39□□□□□ -1.23
SKP1-208ENST00000521216 PLEKHN1Q494U1 663 aaPredicted RBP7.39□□□□□ -1.23
SKP1-208ENST00000521216 OLFML2BQ68BL8 750 aa7.39□□□□□ -1.23
SKP1-208ENST00000521216 MILR1Q7Z6M3 343 aa7.39□□□□□ -1.23
SKP1-208ENST00000521216 IGSF22Q8N9C0 903 aa7.39□□□□□ -1.23
SKP1-208ENST00000521216 MFSD3Q96ES6 412 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms