RNA–Protein interactions for RNA: ENST00000520878.5

CLK4-206, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-206ENST00000520878 ALAS1P13196 640 aa12.63□□□□□ -0.39
CLK4-206ENST00000520878 SMARCA1P28370 1054 aa12.63□□□□□ -0.39
CLK4-206ENST00000520878 DCAF17Q5H9S7 520 aaPredicted RBP12.63□□□□□ -0.39
CLK4-206ENST00000520878 CT47A1Q5JQC4 288 aaPredicted RBP12.63□□□□□ -0.39
CLK4-206ENST00000520878 SH3BP5LQ7L8J4 393 aa12.63□□□□□ -0.39
CLK4-206ENST00000520878 RTKN2Q8IZC4 609 aa12.63□□□□□ -0.39
CLK4-206ENST00000520878 ZNF710Q8N1W2 664 aa12.63□□□□□ -0.39
CLK4-206ENST00000520878 GIMAP8Q8ND71 665 aaPredicted RBP12.63□□□□□ -0.39
CLK4-206ENST00000520878 MRPL44Q9H9J2 332 aaKnown RBP12.63□□□□□ -0.39
CLK4-206ENST00000520878 STK17AQ9UEE5 414 aa12.63□□□□□ -0.39
CLK4-206ENST00000520878 SNED1Q8TER0 1413 aa12.62□□□□□ -0.39
CLK4-206ENST00000520878 CTAGE9A4FU28 777 aa12.62□□□□□ -0.39
CLK4-206ENST00000520878 RHOBTB3O94955 611 aa12.62□□□□□ -0.39
CLK4-206ENST00000520878 EEF1GP26641 437 aaKnown RBP12.62□□□□□ -0.39
CLK4-206ENST00000520878 POLD1P28340 1107 aa12.62□□□□□ -0.39
CLK4-206ENST00000520878 CYP27A1Q02318 531 aa12.62□□□□□ -0.39
CLK4-206ENST00000520878 PPP2R3AQ06190 1150 aa12.62□□□□□ -0.39
CLK4-206ENST00000520878 RRAGAQ7L523 313 aa12.62□□□□□ -0.39
CLK4-206ENST00000520878 KCNK18Q7Z418 384 aa12.62□□□□□ -0.39
CLK4-206ENST00000520878 CHURC1Q8WUH1 139 aa12.62□□□□□ -0.39
CLK4-206ENST00000520878 TBC1D5Q92609 795 aa12.62□□□□□ -0.39
CLK4-206ENST00000520878 RAD54LQ92698 747 aa12.62□□□□□ -0.39
CLK4-206ENST00000520878 ZNF70Q9UC06 446 aaPredicted RBP12.62□□□□□ -0.39
CLK4-206ENST00000520878 ESYT2A0FGR8 921 aa12.62□□□□□ -0.39
CLK4-206ENST00000520878 CYLC1P35663 651 aaPredicted RBP12.62□□□□□ -0.39
CLK4-206ENST00000520878 CDKAL1Q5VV42 579 aa12.62□□□□□ -0.39
CLK4-206ENST00000520878 RSBN1LQ6PCB5 846 aaPredicted RBP12.62□□□□□ -0.39
CLK4-206ENST00000520878 TMCO3Q6UWJ1 677 aa12.62□□□□□ -0.39
CLK4-206ENST00000520878 NSMFQ6X4W1 530 aa12.62□□□□□ -0.39
CLK4-206ENST00000520878 CYP2W1Q8TAV3 490 aa12.62□□□□□ -0.39
CLK4-206ENST00000520878 PRR12Q9ULL5 1215 aa12.62□□□□□ -0.39
CLK4-206ENST00000520878 TFR2Q9UP52 801 aa12.62□□□□□ -0.39
CLK4-206ENST00000520878 MYCLP12524 364 aaPredicted RBP12.62□□□□□ -0.39
CLK4-206ENST00000520878 GCFC2P16383 781 aaKnown RBP12.62□□□□□ -0.39
CLK4-206ENST00000520878 CTTNQ14247 550 aaKnown RBP12.62□□□□□ -0.39
CLK4-206ENST00000520878 KCNB1Q14721 858 aa12.62□□□□□ -0.39
CLK4-206ENST00000520878 PRAMEF18Q5VWM3 479 aa12.62□□□□□ -0.39
CLK4-206ENST00000520878 NEK11Q8NG66 645 aa12.62□□□□□ -0.39
CLK4-206ENST00000520878 MAGEF1Q9HAY2 307 aa12.62□□□□□ -0.39
CLK4-206ENST00000520878 JADE2Q9NQC1 790 aa12.62□□□□□ -0.39
CLK4-206ENST00000520878 ABHD10Q9NUJ1 306 aa12.62□□□□□ -0.39
CLK4-206ENST00000520878 A0A0U1RQJ8 604 aa12.61□□□□□ -0.39
CLK4-206ENST00000520878 GCOM1H8Y6P7 765 aaPredicted RBP12.61□□□□□ -0.39
CLK4-206ENST00000520878 ENC1O14682 589 aa12.61□□□□□ -0.39
CLK4-206ENST00000520878 FAM13AO94988 1023 aa12.61□□□□□ -0.39
CLK4-206ENST00000520878 KIF20AO95235 890 aa12.61□□□□□ -0.39
CLK4-206ENST00000520878 MYL1P05976 194 aa12.61□□□□□ -0.39
CLK4-206ENST00000520878 POLR2MP0CAP2 368 aa12.61□□□□□ -0.39
CLK4-206ENST00000520878 TBC1D10BQ4KMP7 808 aaPredicted RBP12.61□□□□□ -0.39
CLK4-206ENST00000520878 UNC13DQ70J99 1090 aa12.61□□□□□ -0.39
CLK4-206ENST00000520878 CDAN1Q8IWY9 1227 aa12.61□□□□□ -0.39
CLK4-206ENST00000520878 REXO1L1PQ8IX06 675 aa12.61□□□□□ -0.39
CLK4-206ENST00000520878 SLC35F6Q8N357 371 aa12.61□□□□□ -0.39
CLK4-206ENST00000520878 ATRIPQ8WXE1 791 aa12.61□□□□□ -0.39
CLK4-206ENST00000520878 PANX2Q96RD6 677 aa12.61□□□□□ -0.39
CLK4-206ENST00000520878 ZNF341Q9BYN7 854 aa12.61□□□□□ -0.39
CLK4-206ENST00000520878 BHMT2Q9H2M3 363 aa12.61□□□□□ -0.39
CLK4-206ENST00000520878 RGL1Q9NZL6 768 aa12.61□□□□□ -0.39
CLK4-206ENST00000520878 LIMA1Q9UHB6 759 aaKnown RBP12.61□□□□□ -0.39
CLK4-206ENST00000520878 YDJCA8MPS7 323 aa12.61□□□□□ -0.39
CLK4-206ENST00000520878 GCNT3O95395 438 aa12.61□□□□□ -0.39
CLK4-206ENST00000520878 RHOXF2BP0C7M4 288 aa12.61□□□□□ -0.39
CLK4-206ENST00000520878 NBPF9Q3BBW0 867 aa12.61□□□□□ -0.39
CLK4-206ENST00000520878 ANKRD13CQ8N6S4 541 aa12.61□□□□□ -0.39
CLK4-206ENST00000520878 GLIS3Q8NEA6 775 aa12.61□□□□□ -0.39
CLK4-206ENST00000520878 PSMB7Q99436 277 aa12.61□□□□□ -0.39
CLK4-206ENST00000520878 NAP1L4Q99733 375 aaKnown RBP12.61□□□□□ -0.39
CLK4-206ENST00000520878 RHOXF2Q9BQY4 288 aa12.61□□□□□ -0.39
CLK4-206ENST00000520878 NAA15Q9BXJ9 866 aaKnown RBP12.61□□□□□ -0.39
CLK4-206ENST00000520878 AGPAT5Q9NUQ2 364 aa12.61□□□□□ -0.39
CLK4-206ENST00000520878 ADGRG1Q9Y653 693 aa12.61□□□□□ -0.39
CLK4-206ENST00000520878 LGALS16A8MUM7 142 aa12.61□□□□□ -0.39
CLK4-206ENST00000520878 SORBS3O60504 671 aa12.61□□□□□ -0.39
CLK4-206ENST00000520878 GAS7O60861 476 aa12.61□□□□□ -0.39
CLK4-206ENST00000520878 MATR3P43243 847 aaKnown RBP eCLIP12.61□□□□□ -0.39
CLK4-206ENST00000520878 TRIM14Q14142 442 aa12.61□□□□□ -0.39
CLK4-206ENST00000520878 SYCP3Q8IZU3 236 aa12.61□□□□□ -0.39
CLK4-206ENST00000520878 MMTAG2Q9BU76 263 aaKnown RBP12.61□□□□□ -0.39
CLK4-206ENST00000520878 THAP9Q9H5L6 903 aa12.61□□□□□ -0.39
CLK4-206ENST00000520878 A0A1W2PRG0 241 aa12.6□□□□□ -0.39
CLK4-206ENST00000520878 M0R2N6 131 aa12.6□□□□□ -0.39
CLK4-206ENST00000520878 SLFN12Q8IYM2 578 aa12.6□□□□□ -0.39
CLK4-206ENST00000520878 MYCT1Q8N699 235 aa12.6□□□□□ -0.39
CLK4-206ENST00000520878 RDH13Q8NBN7 331 aa12.6□□□□□ -0.39
CLK4-206ENST00000520878 LRRN4CLQ8ND94 238 aa12.6□□□□□ -0.39
CLK4-206ENST00000520878 PNMA5Q96PV4 448 aa12.6□□□□□ -0.39
CLK4-206ENST00000520878 C7orf25Q9BPX7 421 aa12.6□□□□□ -0.39
CLK4-206ENST00000520878 CCPG1Q9ULG6 757 aa12.6□□□□□ -0.39
CLK4-206ENST00000520878 PCDHB13Q9Y5F0 798 aa12.6□□□□□ -0.39
CLK4-206ENST00000520878 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.6□□□□□ -0.39
CLK4-206ENST00000520878 LRCH2Q5VUJ6 765 aa12.6□□□□□ -0.39
CLK4-206ENST00000520878 CIAPIN1Q6FI81 312 aa12.6□□□□□ -0.39
CLK4-206ENST00000520878 POTEAQ6S8J7 498 aa12.6□□□□□ -0.39
CLK4-206ENST00000520878 CCDC94Q9BW85 323 aaPredicted RBP12.6□□□□□ -0.39
CLK4-206ENST00000520878 IDI2Q9BXS1 227 aa12.6□□□□□ -0.39
CLK4-206ENST00000520878 KDM3AQ9Y4C1 1321 aa12.6□□□□□ -0.39
CLK4-206ENST00000520878 C4AP0C0L4 1744 aa12.6□□□□□ -0.39
CLK4-206ENST00000520878 SPDYE2BA6NHP3 402 aa12.6□□□□□ -0.39
CLK4-206ENST00000520878 ENTPD3O75355 529 aa12.6□□□□□ -0.39
CLK4-206ENST00000520878 FLOT1O75955 427 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms