RNA–Protein interactions for RNA: ENST00000520850.5

TNPO1-212, Transcript of transportin 1, humanhuman

TSL 2

Gene TNPO1, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-212ENST00000520850 CPLX1O14810 134 aa18.7■□□□□ 0.58
TNPO1-212ENST00000520850 DYNC1LI2O43237 492 aaPredicted RBP18.7■□□□□ 0.58
TNPO1-212ENST00000520850 CABYRO75952 493 aa18.7■□□□□ 0.58
TNPO1-212ENST00000520850 CDKL5O76039 1030 aa18.7■□□□□ 0.58
TNPO1-212ENST00000520850 C6orf222P0C671 652 aaPredicted RBP18.7■□□□□ 0.58
TNPO1-212ENST00000520850 TXNP10599 105 aaKnown RBP18.7■□□□□ 0.58
TNPO1-212ENST00000520850 ICAM3P32942 547 aa18.7■□□□□ 0.58
TNPO1-212ENST00000520850 ACLYP53396 1101 aa18.7■□□□□ 0.58
TNPO1-212ENST00000520850 KCNA10Q16322 511 aa18.7■□□□□ 0.58
TNPO1-212ENST00000520850 PDE4DIPQ5VU43 2346 aa18.7■□□□□ 0.58
TNPO1-212ENST00000520850 TYW1BQ6NUM6 668 aa18.7■□□□□ 0.58
TNPO1-212ENST00000520850 SLC39A5Q6ZMH5 540 aa18.7■□□□□ 0.58
TNPO1-212ENST00000520850 DPF3Q92784 378 aa18.7■□□□□ 0.58
TNPO1-212ENST00000520850 GPKOWQ92917 476 aaPredicted RBP eCLIP18.7■□□□□ 0.582e-7■□□□□ 10.9
TNPO1-212ENST00000520850 EMID1Q96A84 441 aaPredicted RBP18.7■□□□□ 0.58
TNPO1-212ENST00000520850 UPF2Q9HAU5 1272 aaKnown RBP18.7■□□□□ 0.58
TNPO1-212ENST00000520850 DDX41Q9UJV9 622 aaKnown RBP18.7■□□□□ 0.58
TNPO1-212ENST00000520850 KIAA1217Q5T5P2 1943 aa18.7■□□□□ 0.58
TNPO1-212ENST00000520850 A6NJR5 290 aa18.69■□□□□ 0.58
TNPO1-212ENST00000520850 SPDYE3A6NKU9 549 aa18.69■□□□□ 0.58
TNPO1-212ENST00000520850 MAFGO15525 162 aa18.69■□□□□ 0.58
TNPO1-212ENST00000520850 EVI5O60447 810 aa18.69■□□□□ 0.58
TNPO1-212ENST00000520850 KPNA6O60684 536 aa18.69■□□□□ 0.58
TNPO1-212ENST00000520850 RGS20O76081 388 aa18.69■□□□□ 0.58
TNPO1-212ENST00000520850 DEXIO95424 95 aa18.69■□□□□ 0.58
TNPO1-212ENST00000520850 GNA11P29992 359 aa18.69■□□□□ 0.58
TNPO1-212ENST00000520850 CLK2P49760 499 aaKnown RBP18.69■□□□□ 0.58
TNPO1-212ENST00000520850 CPT1AP50416 773 aa18.69■□□□□ 0.58
TNPO1-212ENST00000520850 SSRP1Q08945 709 aaKnown RBP18.69■□□□□ 0.58
TNPO1-212ENST00000520850 SCRN1Q12765 414 aa18.69■□□□□ 0.58
TNPO1-212ENST00000520850 AP3B2Q13367 1082 aa18.69■□□□□ 0.58
TNPO1-212ENST00000520850 FSCN1Q16658 493 aaKnown RBP18.69■□□□□ 0.58
TNPO1-212ENST00000520850 NOL8Q76FK4 1167 aaKnown RBP18.69■□□□□ 0.58
TNPO1-212ENST00000520850 PHKBQ93100 1093 aa18.69■□□□□ 0.58
TNPO1-212ENST00000520850 LENG1Q96BZ8 264 aaPredicted RBP18.69■□□□□ 0.58
TNPO1-212ENST00000520850 INPP4AQ96PE3 977 aaPredicted RBP18.69■□□□□ 0.58
TNPO1-212ENST00000520850 EHMT1Q9H9B1 1298 aa18.69■□□□□ 0.58
TNPO1-212ENST00000520850 NCOA5Q9HCD5 579 aaKnown RBP18.69■□□□□ 0.58
TNPO1-212ENST00000520850 A0A1W2PQ45 241 aaPredicted RBP18.68■□□□□ 0.58
TNPO1-212ENST00000520850 A0A1W2PQY0 241 aa18.68■□□□□ 0.58
TNPO1-212ENST00000520850 ASGR1P07306 291 aa18.68■□□□□ 0.58
TNPO1-212ENST00000520850 ADCY7P51828 1080 aa18.68■□□□□ 0.58
TNPO1-212ENST00000520850 MRPS9P82933 396 aaKnown RBP18.68■□□□□ 0.58
TNPO1-212ENST00000520850 GNPTABQ3T906 1256 aa18.68■□□□□ 0.58
TNPO1-212ENST00000520850 BRDTQ58F21 947 aaPredicted RBP18.68■□□□□ 0.58
TNPO1-212ENST00000520850 PRPF38BQ5VTL8 546 aaKnown RBP18.68■□□□□ 0.58
TNPO1-212ENST00000520850 SEPT14Q6ZU15 432 aa18.68■□□□□ 0.58
TNPO1-212ENST00000520850 CCDC148Q8NFR7 591 aa18.68■□□□□ 0.58
TNPO1-212ENST00000520850 GLT1D1Q96MS3 346 aa18.68■□□□□ 0.58
TNPO1-212ENST00000520850 SLC26A6Q9BXS9 759 aa18.68■□□□□ 0.58
TNPO1-212ENST00000520850 C6orf50Q9HD87 102 aa18.68■□□□□ 0.58
TNPO1-212ENST00000520850 PCDHA6Q9UN73 950 aa18.68■□□□□ 0.58
TNPO1-212ENST00000520850 PCDHA8Q9Y5H6 950 aa18.68■□□□□ 0.58
TNPO1-212ENST00000520850 DNAH12Q6ZR08 3092 aa18.68■□□□□ 0.58
TNPO1-212ENST00000520850 MYADML2A6NDP7 307 aa18.67■□□□□ 0.58
TNPO1-212ENST00000520850 ARIH2O95376 493 aa18.67■□□□□ 0.58
TNPO1-212ENST00000520850 GH1P01241 217 aa18.67■□□□□ 0.58
TNPO1-212ENST00000520850 MYCLP12524 364 aaPredicted RBP18.67■□□□□ 0.58
TNPO1-212ENST00000520850 LAMC2Q13753 1193 aa18.67■□□□□ 0.58
TNPO1-212ENST00000520850 LRRC26Q2I0M4 334 aa18.67■□□□□ 0.58
TNPO1-212ENST00000520850 TMEM63BQ5T3F8 832 aa18.67■□□□□ 0.58
TNPO1-212ENST00000520850 GALNT17Q6IS24 598 aa18.67■□□□□ 0.58
TNPO1-212ENST00000520850 BICD2Q8TD16 824 aa18.67■□□□□ 0.58
TNPO1-212ENST00000520850 TOX2Q96NM4 488 aa18.67■□□□□ 0.58
TNPO1-212ENST00000520850 SENP7Q9BQF6 1050 aa18.67■□□□□ 0.58
TNPO1-212ENST00000520850 LARP6Q9BRS8 491 aaKnown RBP18.67■□□□□ 0.58
TNPO1-212ENST00000520850 POLR3EQ9NVU0 708 aa18.67■□□□□ 0.58
TNPO1-212ENST00000520850 STK36Q9NRP7 1315 aa18.67■□□□□ 0.58
TNPO1-212ENST00000520850 SPATA31C2B4DYI2 1134 aa18.66■□□□□ 0.58
TNPO1-212ENST00000520850 CDK7P50613 346 aa18.66■□□□□ 0.58
TNPO1-212ENST00000520850 ME3Q16798 604 aa18.66■□□□□ 0.58
TNPO1-212ENST00000520850 IL31RAQ8NI17 732 aa18.66■□□□□ 0.58
TNPO1-212ENST00000520850 CDHR1Q96JP9 859 aa18.66■□□□□ 0.58
TNPO1-212ENST00000520850 LIMCH1Q9UPQ0 1083 aa18.66■□□□□ 0.58
TNPO1-212ENST00000520850 MRVI1Q9Y6F6 885 aa18.66■□□□□ 0.58
TNPO1-212ENST00000520850 FIBPO43427 364 aa18.65■□□□□ 0.58
TNPO1-212ENST00000520850 ARHGAP1Q07960 439 aa18.65■□□□□ 0.58
TNPO1-212ENST00000520850 STK3Q13188 491 aa18.65■□□□□ 0.58
TNPO1-212ENST00000520850 RABEP1Q15276 862 aa18.65■□□□□ 0.58
TNPO1-212ENST00000520850 ANKRD33Q7Z3H0 272 aa18.65■□□□□ 0.58
TNPO1-212ENST00000520850 NLRX1Q86UT6 975 aa18.65■□□□□ 0.58
TNPO1-212ENST00000520850 SLC43A3Q8NBI5 491 aa18.65■□□□□ 0.58
TNPO1-212ENST00000520850 OR6J1Q8NGC5 347 aa18.65■□□□□ 0.58
TNPO1-212ENST00000520850 GTF3C6Q969F1 213 aa18.65■□□□□ 0.58
TNPO1-212ENST00000520850 GPRASP2Q96D09 838 aa18.65■□□□□ 0.58
TNPO1-212ENST00000520850 ZSCAN31Q96LW9 406 aaPredicted RBP18.65■□□□□ 0.58
TNPO1-212ENST00000520850 STARD7Q9NQZ5 370 aa18.65■□□□□ 0.58
TNPO1-212ENST00000520850 MYCNP04198 464 aaPredicted RBP18.64■□□□□ 0.57
TNPO1-212ENST00000520850 HOXD8P13378 290 aaPredicted RBP18.64■□□□□ 0.57
TNPO1-212ENST00000520850 SREBF1P36956 1147 aa18.64■□□□□ 0.57
TNPO1-212ENST00000520850 NEDD9Q14511 834 aa18.64■□□□□ 0.57
TNPO1-212ENST00000520850 UBE2SQ16763 222 aa18.64■□□□□ 0.57
TNPO1-212ENST00000520850 LY6KQ17RY6 165 aa18.64■□□□□ 0.57
TNPO1-212ENST00000520850 CELF3Q5SZQ8 465 aaKnown RBP18.64■□□□□ 0.57
TNPO1-212ENST00000520850 MYSM1Q5VVJ2 828 aa18.64■□□□□ 0.57
TNPO1-212ENST00000520850 GIMAP8Q8ND71 665 aaPredicted RBP18.64■□□□□ 0.57
TNPO1-212ENST00000520850 CRYGNQ8WXF5 182 aa18.64■□□□□ 0.57
TNPO1-212ENST00000520850 FERMT2Q96AC1 680 aa18.64■□□□□ 0.57
TNPO1-212ENST00000520850 BACH2Q9BYV9 841 aa18.64■□□□□ 0.57
TNPO1-212ENST00000520850 UBIAD1Q9Y5Z9 338 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms