RNA–Protein interactions for RNA: ENST00000520348.5

SNHG6-201, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 2 BASIC

Gene SNHG6, Length 648 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-201ENST00000520348 TRERF1Q96PN7 1200 aa18.09■□□□□ 0.49
SNHG6-201ENST00000520348 KBTBD4Q9NVX7 518 aa18.09■□□□□ 0.49
SNHG6-201ENST00000520348 LRWD1Q9UFC0 647 aa18.09■□□□□ 0.49
SNHG6-201ENST00000520348 MAN1B1Q9UKM7 699 aa18.09■□□□□ 0.49
SNHG6-201ENST00000520348 RIPK3Q9Y572 518 aa18.09■□□□□ 0.49
SNHG6-201ENST00000520348 CTDP1Q9Y5B0 961 aaPredicted RBP18.09■□□□□ 0.49
SNHG6-201ENST00000520348 TRAF5O00463 557 aa18.08■□□□□ 0.48
SNHG6-201ENST00000520348 MEIS1O00470 390 aa18.08■□□□□ 0.48
SNHG6-201ENST00000520348 MSH4O15457 936 aa18.08■□□□□ 0.48
SNHG6-201ENST00000520348 BCRP11274 1271 aa18.08■□□□□ 0.48
SNHG6-201ENST00000520348 PLCG1P19174 1290 aa18.08■□□□□ 0.48
SNHG6-201ENST00000520348 STAT6P42226 847 aa18.08■□□□□ 0.48
SNHG6-201ENST00000520348 SETQ01105 290 aaPredicted RBP18.08■□□□□ 0.48
SNHG6-201ENST00000520348 GRB10Q13322 594 aa18.08■□□□□ 0.48
SNHG6-201ENST00000520348 MORC3Q14149 939 aa18.08■□□□□ 0.48
SNHG6-201ENST00000520348 TTLL12Q14166 644 aaPredicted RBP18.08■□□□□ 0.48
SNHG6-201ENST00000520348 PRR16Q569H4 304 aa18.08■□□□□ 0.48
SNHG6-201ENST00000520348 RRAGBQ5VZM2 374 aa18.08■□□□□ 0.48
SNHG6-201ENST00000520348 SNRNP48Q6IEG0 339 aaKnown RBP18.08■□□□□ 0.48
SNHG6-201ENST00000520348 PNMA5Q96PV4 448 aa18.08■□□□□ 0.48
SNHG6-201ENST00000520348 PPP1R9BQ96SB3 815 aa18.08■□□□□ 0.48
SNHG6-201ENST00000520348 RRAGCQ9HB90 399 aa18.08■□□□□ 0.48
SNHG6-201ENST00000520348 STK17AQ9UEE5 414 aa18.08■□□□□ 0.48
SNHG6-201ENST00000520348 PCDHA12Q9UN75 941 aa18.08■□□□□ 0.48
SNHG6-201ENST00000520348 CLEC11AQ9Y240 323 aa18.08■□□□□ 0.48
SNHG6-201ENST00000520348 POTEMA6NI47 508 aa18.07■□□□□ 0.48
SNHG6-201ENST00000520348 SMC2O95347 1197 aa18.07■□□□□ 0.48
SNHG6-201ENST00000520348 BMP6P22004 513 aa18.07■□□□□ 0.48
SNHG6-201ENST00000520348 RPS6P62753 249 aaKnown RBP18.07■□□□□ 0.48
SNHG6-201ENST00000520348 CEP55Q53EZ4 464 aa18.07■□□□□ 0.48
SNHG6-201ENST00000520348 PCNX4Q63HM2 1172 aa18.07■□□□□ 0.48
SNHG6-201ENST00000520348 XRRA1Q6P2D8 792 aa18.07■□□□□ 0.48
SNHG6-201ENST00000520348 SLC30A10Q6XR72 485 aa18.07■□□□□ 0.48
SNHG6-201ENST00000520348 FASTKD5Q7L8L6 764 aaKnown RBP18.07■□□□□ 0.48
SNHG6-201ENST00000520348 GRAMD1CQ8IYS0 662 aa18.07■□□□□ 0.48
SNHG6-201ENST00000520348 SLC5A5Q92911 643 aa18.07■□□□□ 0.48
SNHG6-201ENST00000520348 SMARCE1Q969G3 411 aa18.07■□□□□ 0.48
SNHG6-201ENST00000520348 GSDMAQ96QA5 445 aa18.07■□□□□ 0.48
SNHG6-201ENST00000520348 VAV3Q9UKW4 847 aa18.07■□□□□ 0.48
SNHG6-201ENST00000520348 STK24Q9Y6E0 443 aa18.07■□□□□ 0.48
SNHG6-201ENST00000520348 LCTP09848 1927 aa18.06■□□□□ 0.48
SNHG6-201ENST00000520348 KDM3AQ9Y4C1 1321 aa18.06■□□□□ 0.48
SNHG6-201ENST00000520348 A0A087WWV3 80 aa18.06■□□□□ 0.48
SNHG6-201ENST00000520348 STAT3P40763 770 aa18.06■□□□□ 0.48
SNHG6-201ENST00000520348 CT47A1Q5JQC4 288 aaPredicted RBP18.06■□□□□ 0.48
SNHG6-201ENST00000520348 GPAT2Q6NUI2 795 aa18.06■□□□□ 0.48
SNHG6-201ENST00000520348 CNNM4Q6P4Q7 775 aa18.06■□□□□ 0.48
SNHG6-201ENST00000520348 B3GNT9Q6UX72 402 aa18.06■□□□□ 0.48
SNHG6-201ENST00000520348 RNF207Q6ZRF8 634 aa18.06■□□□□ 0.48
SNHG6-201ENST00000520348 RIOX2Q8IUF8 465 aa18.06■□□□□ 0.48
SNHG6-201ENST00000520348 CHST13Q8NET6 341 aa18.06■□□□□ 0.48
SNHG6-201ENST00000520348 CALML4Q96GE6 196 aa18.06■□□□□ 0.48
SNHG6-201ENST00000520348 NAT10Q9H0A0 1025 aaKnown RBP18.06■□□□□ 0.48
SNHG6-201ENST00000520348 ACAD9Q9H845 621 aa18.06■□□□□ 0.48
SNHG6-201ENST00000520348 BLOC1S4Q9NUP1 217 aa18.06■□□□□ 0.48
SNHG6-201ENST00000520348 UBIAD1Q9Y5Z9 338 aa18.06■□□□□ 0.48
SNHG6-201ENST00000520348 PSMD10O75832 226 aa18.05■□□□□ 0.48
SNHG6-201ENST00000520348 PABPC4Q13310 644 aaKnown RBP eCLIP18.05■□□□□ 0.484e-10■■■□□ 18.3
SNHG6-201ENST00000520348 SNAPC2Q13487 334 aa18.05■□□□□ 0.48
SNHG6-201ENST00000520348 KRT79Q5XKE5 535 aa18.05■□□□□ 0.48
SNHG6-201ENST00000520348 GADL1Q6ZQY3 521 aa18.05■□□□□ 0.48
SNHG6-201ENST00000520348 DHX40Q8IX18 779 aaKnown RBP18.05■□□□□ 0.48
SNHG6-201ENST00000520348 KCTD17Q8N5Z5 321 aa18.05■□□□□ 0.48
SNHG6-201ENST00000520348 CYP2W1Q8TAV3 490 aa18.05■□□□□ 0.48
SNHG6-201ENST00000520348 SNX29Q8TEQ0 813 aa18.05■□□□□ 0.48
SNHG6-201ENST00000520348 NUDT12Q9BQG2 462 aa18.05■□□□□ 0.48
SNHG6-201ENST00000520348 MXRA8Q9BRK3 442 aa18.05■□□□□ 0.48
SNHG6-201ENST00000520348 ASCC2Q9H1I8 757 aaPredicted RBP18.05■□□□□ 0.48
SNHG6-201ENST00000520348 GBA2Q9HCG7 927 aaPredicted RBP18.05■□□□□ 0.48
SNHG6-201ENST00000520348 SLC45A1Q9Y2W3 748 aa18.05■□□□□ 0.48
SNHG6-201ENST00000520348 BIN1O00499 593 aa18.04■□□□□ 0.48
SNHG6-201ENST00000520348 CNMDO75829 334 aa18.04■□□□□ 0.48
SNHG6-201ENST00000520348 ZNF76P36508 570 aa18.04■□□□□ 0.48
SNHG6-201ENST00000520348 AFMP43652 599 aa18.04■□□□□ 0.48
SNHG6-201ENST00000520348 FMR1Q06787 632 aaKnown RBP eCLIP18.04■□□□□ 0.48
SNHG6-201ENST00000520348 CCDC173Q0VFZ6 552 aa18.04■□□□□ 0.48
SNHG6-201ENST00000520348 PPP2R5CQ13362 524 aa18.04■□□□□ 0.48
SNHG6-201ENST00000520348 ZRSR1Q15695 479 aaKnown RBP18.04■□□□□ 0.48
SNHG6-201ENST00000520348 LUZP1Q86V48 1076 aa18.04■□□□□ 0.48
SNHG6-201ENST00000520348 PLA2G4DQ86XP0 818 aa18.04■□□□□ 0.48
SNHG6-201ENST00000520348 MLKLQ8NB16 471 aa18.04■□□□□ 0.48
SNHG6-201ENST00000520348 IL31RAQ8NI17 732 aa18.04■□□□□ 0.48
SNHG6-201ENST00000520348 TAAR1Q96RJ0 339 aa18.04■□□□□ 0.48
SNHG6-201ENST00000520348 PDCD2LQ9BRP1 358 aa18.04■□□□□ 0.48
SNHG6-201ENST00000520348 PXMP2Q9NR77 195 aa18.04■□□□□ 0.48
SNHG6-201ENST00000520348 HOMER2Q9NSB8 354 aa18.04■□□□□ 0.48
SNHG6-201ENST00000520348 BTBD7Q9P203 1132 aa18.04■□□□□ 0.48
SNHG6-201ENST00000520348 IKBKBO14920 756 aa18.03■□□□□ 0.48
SNHG6-201ENST00000520348 ITGB5P18084 799 aa18.03■□□□□ 0.48
SNHG6-201ENST00000520348 COPB2P35606 906 aa18.03■□□□□ 0.48
SNHG6-201ENST00000520348 HERVK_113P62684 666 aa18.03■□□□□ 0.48
SNHG6-201ENST00000520348 IRX3P78415 501 aaPredicted RBP18.03■□□□□ 0.48
SNHG6-201ENST00000520348 MRPS9P82933 396 aaKnown RBP18.03■□□□□ 0.48
SNHG6-201ENST00000520348 BAATQ14032 418 aaPredicted RBP18.03■□□□□ 0.48
SNHG6-201ENST00000520348 KCNB1Q14721 858 aa18.03■□□□□ 0.48
SNHG6-201ENST00000520348 NCAPHQ15003 741 aa18.03■□□□□ 0.48
SNHG6-201ENST00000520348 PGM5Q15124 567 aa18.03■□□□□ 0.48
SNHG6-201ENST00000520348 GJA10Q969M2 543 aa18.03■□□□□ 0.48
SNHG6-201ENST00000520348 SLC10A4Q96EP9 437 aa18.03■□□□□ 0.48
SNHG6-201ENST00000520348 RIT2Q99578 217 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms