RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 ASB11Q8WXH4 323 aa7.16□□□□□ -1.26
HMGB1P46-201ENST00000520062 CCDC136Q96JN2 1154 aa7.16□□□□□ -1.26
HMGB1P46-201ENST00000520062 C8orf48Q96LL4 319 aa7.16□□□□□ -1.26
HMGB1P46-201ENST00000520062 PIM2Q9P1W9 311 aa7.16□□□□□ -1.26
HMGB1P46-201ENST00000520062 E2F8A0AVK6 867 aa7.15□□□□□ -1.26
HMGB1P46-201ENST00000520062 FOSL1P15407 271 aa7.15□□□□□ -1.26
HMGB1P46-201ENST00000520062 ID4P47928 161 aa7.15□□□□□ -1.26
HMGB1P46-201ENST00000520062 CRY1Q16526 586 aa7.15□□□□□ -1.26
HMGB1P46-201ENST00000520062 RGL3Q3MIN7 710 aa7.15□□□□□ -1.26
HMGB1P46-201ENST00000520062 ATP13A4Q4VNC1 1196 aa7.15□□□□□ -1.26
HMGB1P46-201ENST00000520062 WAPLQ7Z5K2 1190 aa7.15□□□□□ -1.26
HMGB1P46-201ENST00000520062 CNTD1Q8N815 330 aa7.15□□□□□ -1.26
HMGB1P46-201ENST00000520062 TMEM52Q8NDY8 209 aa7.15□□□□□ -1.26
HMGB1P46-201ENST00000520062 CHMP4CQ96CF2 233 aa7.15□□□□□ -1.26
HMGB1P46-201ENST00000520062 HRASLS5Q96KN8 279 aa7.15□□□□□ -1.26
HMGB1P46-201ENST00000520062 ATP13A1Q9HD20 1204 aa7.15□□□□□ -1.26
HMGB1P46-201ENST00000520062 TNFRSF10DQ9UBN6 386 aa7.15□□□□□ -1.26
HMGB1P46-201ENST00000520062 PTPDC1A2A3K4 754 aa7.14□□□□□ -1.27
HMGB1P46-201ENST00000520062 ATP2A2P16615 1042 aaKnown RBP7.14□□□□□ -1.27
HMGB1P46-201ENST00000520062 RPL10P27635 214 aaKnown RBP7.14□□□□□ -1.27
HMGB1P46-201ENST00000520062 BCL6P41182 706 aa7.14□□□□□ -1.27
HMGB1P46-201ENST00000520062 DNM2P50570 870 aa7.14□□□□□ -1.27
HMGB1P46-201ENST00000520062 KPNA1P52294 538 aaPredicted RBP7.14□□□□□ -1.27
HMGB1P46-201ENST00000520062 ZDHHC13Q8IUH4 622 aa7.14□□□□□ -1.27
HMGB1P46-201ENST00000520062 RAVER1Q8IY67 606 aaKnown RBP7.14□□□□□ -1.27
HMGB1P46-201ENST00000520062 C2orf69Q8N8R5 385 aa7.14□□□□□ -1.27
HMGB1P46-201ENST00000520062 SYTL4Q96C24 671 aaPredicted RBP7.14□□□□□ -1.27
HMGB1P46-201ENST00000520062 MISP3Q96FF7 219 aa7.14□□□□□ -1.27
HMGB1P46-201ENST00000520062 CAMKK2Q96RR4 588 aa7.14□□□□□ -1.27
HMGB1P46-201ENST00000520062 TRIM8Q9BZR9 551 aa7.14□□□□□ -1.27
HMGB1P46-201ENST00000520062 EMC7Q9NPA0 242 aa7.14□□□□□ -1.27
HMGB1P46-201ENST00000520062 CATSPERZQ9NTU4 200 aa7.14□□□□□ -1.27
HMGB1P46-201ENST00000520062 THG1LQ9NWX6 298 aaKnown RBP7.14□□□□□ -1.27
HMGB1P46-201ENST00000520062 CLDND1Q9NY35 253 aa7.14□□□□□ -1.27
HMGB1P46-201ENST00000520062 FBXL7Q9UJT9 491 aa7.14□□□□□ -1.27
HMGB1P46-201ENST00000520062 TRHDEQ9UKU6 1024 aa7.14□□□□□ -1.27
HMGB1P46-201ENST00000520062 GABRDO14764 452 aa7.13□□□□□ -1.27
HMGB1P46-201ENST00000520062 TSPAN6O43657 245 aa7.13□□□□□ -1.27
HMGB1P46-201ENST00000520062 PRKD3O94806 890 aa7.13□□□□□ -1.27
HMGB1P46-201ENST00000520062 YBX3P16989 372 aaKnown RBP eCLIP7.13□□□□□ -1.27
HMGB1P46-201ENST00000520062 CORO7P57737 925 aa7.13□□□□□ -1.27
HMGB1P46-201ENST00000520062 PRKCQQ04759 706 aa7.13□□□□□ -1.27
HMGB1P46-201ENST00000520062 PPP2R5AQ15172 486 aa7.13□□□□□ -1.27
HMGB1P46-201ENST00000520062 IQSEC1Q6DN90 963 aa7.13□□□□□ -1.27
HMGB1P46-201ENST00000520062 ZPBP2Q6X784 338 aa7.13□□□□□ -1.27
HMGB1P46-201ENST00000520062 NLRP10Q86W26 655 aa7.13□□□□□ -1.27
HMGB1P46-201ENST00000520062 EFHBQ8N7U6 833 aa7.13□□□□□ -1.27
HMGB1P46-201ENST00000520062 NLGN2Q8NFZ4 835 aa7.13□□□□□ -1.27
HMGB1P46-201ENST00000520062 COG1Q8WTW3 980 aa7.13□□□□□ -1.27
HMGB1P46-201ENST00000520062 DPF3Q92784 378 aa7.13□□□□□ -1.27
HMGB1P46-201ENST00000520062 TMEM169Q96HH4 297 aa7.13□□□□□ -1.27
HMGB1P46-201ENST00000520062 CHAMP1Q96JM3 812 aa7.13□□□□□ -1.27
HMGB1P46-201ENST00000520062 GPR101Q96P66 508 aaPredicted RBP7.13□□□□□ -1.27
HMGB1P46-201ENST00000520062 PPARGC1AQ9UBK2 798 aaKnown RBP7.13□□□□□ -1.27
HMGB1P46-201ENST00000520062 ZC3H7BQ9UGR2 993 aaKnown RBP7.13□□□□□ -1.27
HMGB1P46-201ENST00000520062 VAV3Q9UKW4 847 aa7.13□□□□□ -1.27
HMGB1P46-201ENST00000520062 CBLCQ9ULV8 474 aa7.13□□□□□ -1.27
HMGB1P46-201ENST00000520062 A0A1W2PQ45 241 aaPredicted RBP7.12□□□□□ -1.27
HMGB1P46-201ENST00000520062 A0A1W2PQY0 241 aa7.12□□□□□ -1.27
HMGB1P46-201ENST00000520062 PRR19A6NJB7 356 aa7.12□□□□□ -1.27
HMGB1P46-201ENST00000520062 ZNF561-AS1K7EIQ3 104 aa7.12□□□□□ -1.27
HMGB1P46-201ENST00000520062 FBXO21O94952 628 aa7.12□□□□□ -1.27
HMGB1P46-201ENST00000520062 CEBPAP49715 358 aaPredicted RBP7.12□□□□□ -1.27
HMGB1P46-201ENST00000520062 SESN3P58005 492 aa7.12□□□□□ -1.27
HMGB1P46-201ENST00000520062 SPIRE1Q08AE8 756 aa7.12□□□□□ -1.27
HMGB1P46-201ENST00000520062 KCNMA1Q12791 1236 aa7.12□□□□□ -1.27
HMGB1P46-201ENST00000520062 GPR19Q15760 415 aa7.12□□□□□ -1.27
HMGB1P46-201ENST00000520062 HABP4Q5JVS0 413 aaKnown RBP7.12□□□□□ -1.27
HMGB1P46-201ENST00000520062 CREB3L3Q68CJ9 461 aa7.12□□□□□ -1.27
HMGB1P46-201ENST00000520062 ZBTB46Q86UZ6 589 aa7.12□□□□□ -1.27
HMGB1P46-201ENST00000520062 PASD1Q8IV76 773 aa7.12□□□□□ -1.27
HMGB1P46-201ENST00000520062 CISD2Q8N5K1 135 aaKnown RBP7.12□□□□□ -1.27
HMGB1P46-201ENST00000520062 CHTF18Q8WVB6 975 aa7.12□□□□□ -1.27
HMGB1P46-201ENST00000520062 MAP6Q96JE9 813 aa7.12□□□□□ -1.27
HMGB1P46-201ENST00000520062 BOCQ9BWV1 1114 aa7.12□□□□□ -1.27
HMGB1P46-201ENST00000520062 CCDC8Q9H0W5 538 aaPredicted RBP7.12□□□□□ -1.27
HMGB1P46-201ENST00000520062 SPTLC3Q9NUV7 552 aa7.12□□□□□ -1.27
HMGB1P46-201ENST00000520062 LMCD1Q9NZU5 365 aa7.12□□□□□ -1.27
HMGB1P46-201ENST00000520062 STK17AQ9UEE5 414 aa7.12□□□□□ -1.27
HMGB1P46-201ENST00000520062 X6R8D5 127 aa7.12□□□□□ -1.27
HMGB1P46-201ENST00000520062 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.11□□□□□ -1.27
HMGB1P46-201ENST00000520062 WTIPA6NIX2 430 aaPredicted RBP7.11□□□□□ -1.27
HMGB1P46-201ENST00000520062 FADS2P1A8MWK0 482 aa7.11□□□□□ -1.27
HMGB1P46-201ENST00000520062 AKAP10O43572 662 aa7.11□□□□□ -1.27
HMGB1P46-201ENST00000520062 PDE6AP16499 860 aa7.11□□□□□ -1.27
HMGB1P46-201ENST00000520062 KIR2DL1P43626 348 aaPredicted RBP7.11□□□□□ -1.27
HMGB1P46-201ENST00000520062 KIR2DL2P43627 348 aaPredicted RBP7.11□□□□□ -1.27
HMGB1P46-201ENST00000520062 DUSP4Q13115 394 aa7.11□□□□□ -1.27
HMGB1P46-201ENST00000520062 PIN1Q13526 163 aaPredicted RBP7.11□□□□□ -1.27
HMGB1P46-201ENST00000520062 HHIPL2Q6UWX4 724 aa7.11□□□□□ -1.27
HMGB1P46-201ENST00000520062 CEP68Q76N32 757 aa7.11□□□□□ -1.27
HMGB1P46-201ENST00000520062 LINC01599Q8WXQ3 324 aa7.11□□□□□ -1.27
HMGB1P46-201ENST00000520062 SMAD5Q99717 465 aaKnown RBP7.11□□□□□ -1.27
HMGB1P46-201ENST00000520062 YIPF4Q9BSR8 244 aa7.11□□□□□ -1.27
HMGB1P46-201ENST00000520062 G6PC3Q9BUM1 346 aa7.11□□□□□ -1.27
HMGB1P46-201ENST00000520062 EPB41L1Q9H4G0 881 aa7.11□□□□□ -1.27
HMGB1P46-201ENST00000520062 OXSMQ9NWU1 459 aa7.11□□□□□ -1.27
HMGB1P46-201ENST00000520062 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.11□□□□□ -1.27
HMGB1P46-201ENST00000520062 SLC12A8A0AV02 714 aa7.1□□□□□ -1.27
HMGB1P46-201ENST00000520062 SHTN1A0MZ66 631 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms