RNA–Protein interactions for RNA: ENST00000519540.5

FAM49B-214, Transcript of family with sequence similarity 49 member B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM49B, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-214ENST00000519540 DGKZQ13574 1117 aa20.7■□□□□ 0.9
FAM49B-214ENST00000519540 TPD52L1Q16890 204 aaPredicted RBP20.7■□□□□ 0.9
FAM49B-214ENST00000519540 ARMCX5Q6P1M9 558 aa20.7■□□□□ 0.9
FAM49B-214ENST00000519540 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.7■□□□□ 0.9
FAM49B-214ENST00000519540 NT5C3AQ9H0P0 336 aa20.7■□□□□ 0.9
FAM49B-214ENST00000519540 EXOC1Q9NV70 894 aa20.7■□□□□ 0.9
FAM49B-214ENST00000519540 SBF1O95248 1867 aa20.69■□□□□ 0.9
FAM49B-214ENST00000519540 DOCK1Q14185 1865 aa20.69■□□□□ 0.9
FAM49B-214ENST00000519540 KDM3AQ9Y4C1 1321 aa20.69■□□□□ 0.9
FAM49B-214ENST00000519540 A0A1B0GTH6 734 aa20.69■□□□□ 0.9
FAM49B-214ENST00000519540 SKILP12757 684 aa20.69■□□□□ 0.9
FAM49B-214ENST00000519540 CCZ1BP86790 482 aa20.69■□□□□ 0.9
FAM49B-214ENST00000519540 CCZ1P86791 482 aaPredicted RBP20.69■□□□□ 0.9
FAM49B-214ENST00000519540 SPIRE1Q08AE8 756 aa20.69■□□□□ 0.9
FAM49B-214ENST00000519540 MTMR2Q13614 643 aa20.69■□□□□ 0.9
FAM49B-214ENST00000519540 NR1I3Q14994 352 aa20.69■□□□□ 0.9
FAM49B-214ENST00000519540 CCDC150Q8NCX0 1101 aa20.69■□□□□ 0.9
FAM49B-214ENST00000519540 AGBL1Q96MI9 1066 aa20.69■□□□□ 0.9
FAM49B-214ENST00000519540 WDR18Q9BV38 432 aa20.69■□□□□ 0.9
FAM49B-214ENST00000519540 GTPBP4Q9BZE4 634 aaKnown RBP20.69■□□□□ 0.9
FAM49B-214ENST00000519540 EMILIN3Q9NT22 766 aa20.69■□□□□ 0.9
FAM49B-214ENST00000519540 GGA3Q9NZ52 723 aa20.69■□□□□ 0.9
FAM49B-214ENST00000519540 MSH4O15457 936 aa20.68■□□□□ 0.9
FAM49B-214ENST00000519540 ZNF76P36508 570 aa20.68■□□□□ 0.9
FAM49B-214ENST00000519540 STIM1Q13586 685 aa20.68■□□□□ 0.9
FAM49B-214ENST00000519540 CNNM4Q6P4Q7 775 aa20.68■□□□□ 0.9
FAM49B-214ENST00000519540 CYP2W1Q8TAV3 490 aa20.68■□□□□ 0.9
FAM49B-214ENST00000519540 ZKSCAN4Q969J2 545 aaPredicted RBP20.68■□□□□ 0.9
FAM49B-214ENST00000519540 WRNIP1Q96S55 665 aa20.68■□□□□ 0.9
FAM49B-214ENST00000519540 LRRC27Q9C0I9 530 aa20.68■□□□□ 0.9
FAM49B-214ENST00000519540 CCPG1Q9ULG6 757 aa20.68■□□□□ 0.9
FAM49B-214ENST00000519540 IGLV3-22A0A075B6J6 115 aa20.68■□□□□ 0.9
FAM49B-214ENST00000519540 PVALEFA0A1B0GWK0 134 aa20.68■□□□□ 0.9
FAM49B-214ENST00000519540 STAT3P40763 770 aa20.68■□□□□ 0.9
FAM49B-214ENST00000519540 USP14P54578 494 aa20.68■□□□□ 0.9
FAM49B-214ENST00000519540 SPP2Q13103 211 aa20.68■□□□□ 0.9
FAM49B-214ENST00000519540 VCAM1P19320 739 aa20.67■□□□□ 0.9
FAM49B-214ENST00000519540 STK4Q13043 487 aa20.67■□□□□ 0.9
FAM49B-214ENST00000519540 PTPN21Q16825 1174 aa20.67■□□□□ 0.9
FAM49B-214ENST00000519540 DHTKD1Q96HY7 919 aaPredicted RBP20.67■□□□□ 0.9
FAM49B-214ENST00000519540 CTAGE1Q96RT6 745 aa20.67■□□□□ 0.9
FAM49B-214ENST00000519540 TANGO6Q9C0B7 1094 aa20.67■□□□□ 0.9
FAM49B-214ENST00000519540 PPP2R3BQ9Y5P8 575 aa20.67■□□□□ 0.9
FAM49B-214ENST00000519540 PSMA7O14818 248 aa20.66■□□□□ 0.9
FAM49B-214ENST00000519540 PTPRAP18433 802 aa20.66■□□□□ 0.9
FAM49B-214ENST00000519540 SFPQP23246 707 aaKnown RBP eCLIP20.66■□□□□ 0.9
FAM49B-214ENST00000519540 UNC13DQ70J99 1090 aa20.66■□□□□ 0.9
FAM49B-214ENST00000519540 SLC38A10Q9HBR0 1119 aa20.66■□□□□ 0.9
FAM49B-214ENST00000519540 ADD3Q9UEY8 706 aaKnown RBP20.66■□□□□ 0.9
FAM49B-214ENST00000519540 FZD1Q9UP38 647 aa20.66■□□□□ 0.9
FAM49B-214ENST00000519540 KIAA1024Q9UPX6 916 aa20.66■□□□□ 0.9
FAM49B-214ENST00000519540 LRRC10BA6NIK2 292 aa20.66■□□□□ 0.9
FAM49B-214ENST00000519540 FCER1AP12319 257 aa20.66■□□□□ 0.9
FAM49B-214ENST00000519540 HSD17B4P51659 736 aa20.66■□□□□ 0.9
FAM49B-214ENST00000519540 PMS1P54277 932 aaKnown RBP20.66■□□□□ 0.9
FAM49B-214ENST00000519540 BACE1P56817 501 aa20.66■□□□□ 0.9
FAM49B-214ENST00000519540 DYMQ7RTS9 669 aa20.66■□□□□ 0.9
FAM49B-214ENST00000519540 EHMT1Q9H9B1 1298 aa20.66■□□□□ 0.9
FAM49B-214ENST00000519540 AS3MTQ9HBK9 375 aa20.66■□□□□ 0.9
FAM49B-214ENST00000519540 PICK1Q9NRD5 415 aa20.66■□□□□ 0.9
FAM49B-214ENST00000519540 LIMA1Q9UHB6 759 aaKnown RBP20.66■□□□□ 0.9
FAM49B-214ENST00000519540 TRIM49BA6NDI0 452 aa20.65■□□□□ 0.9
FAM49B-214ENST00000519540 MED24O75448 989 aa20.65■□□□□ 0.9
FAM49B-214ENST00000519540 FLOT1O75955 427 aa20.65■□□□□ 0.9
FAM49B-214ENST00000519540 TBX2Q13207 712 aaPredicted RBP20.65■□□□□ 0.9
FAM49B-214ENST00000519540 COBLL1Q53SF7 1204 aa20.65■□□□□ 0.9
FAM49B-214ENST00000519540 SPECC1LQ69YQ0 1117 aa20.65■□□□□ 0.9
FAM49B-214ENST00000519540 ZNF280CQ8ND82 737 aa20.65■□□□□ 0.9
FAM49B-214ENST00000519540 CLEC4DQ8WXI8 215 aa20.65■□□□□ 0.9
FAM49B-214ENST00000519540 DDX12PQ92771 950 aa20.65■□□□□ 0.9
FAM49B-214ENST00000519540 RPAP3Q9H6T3 665 aaPredicted RBP20.65■□□□□ 0.9
FAM49B-214ENST00000519540 PPP1R9AQ9ULJ8 1098 aa20.65■□□□□ 0.9
FAM49B-214ENST00000519540 POTEB3A0JP26 581 aa20.65■□□□□ 0.9
FAM49B-214ENST00000519540 POTECB2RU33 542 aa20.65■□□□□ 0.9
FAM49B-214ENST00000519540 DDNO94850 711 aaPredicted RBP20.65■□□□□ 0.9
FAM49B-214ENST00000519540 PPP1R2P41236 205 aa20.65■□□□□ 0.9
FAM49B-214ENST00000519540 SPAG1Q07617 926 aa20.65■□□□□ 0.9
FAM49B-214ENST00000519540 HAUS3Q68CZ6 603 aa20.65■□□□□ 0.9
FAM49B-214ENST00000519540 POTEBQ6S5H4 581 aa20.65■□□□□ 0.9
FAM49B-214ENST00000519540 KLRG1Q96E93 195 aa20.65■□□□□ 0.9
FAM49B-214ENST00000519540 VAV3Q9UKW4 847 aa20.65■□□□□ 0.9
FAM49B-214ENST00000519540 E9PMD0 336 aa20.64■□□□□ 0.89
FAM49B-214ENST00000519540 NCAPH2Q6IBW4 605 aa20.64■□□□□ 0.89
FAM49B-214ENST00000519540 CATSPER3Q86XQ3 398 aa20.64■□□□□ 0.89
FAM49B-214ENST00000519540 CPXCR1Q8N123 301 aa20.64■□□□□ 0.89
FAM49B-214ENST00000519540 ERMNQ8TAM6 284 aa20.64■□□□□ 0.89
FAM49B-214ENST00000519540 RAVER2Q9HCJ3 691 aaKnown RBP20.64■□□□□ 0.89
FAM49B-214ENST00000519540 STK24Q9Y6E0 443 aa20.64■□□□□ 0.89
FAM49B-214ENST00000519540 TEX33O43247 280 aa20.63■□□□□ 0.89
FAM49B-214ENST00000519540 UBXN2AP68543 259 aa20.63■□□□□ 0.89
FAM49B-214ENST00000519540 KRT31Q15323 416 aa20.63■□□□□ 0.89
FAM49B-214ENST00000519540 FILIP1LQ4L180 1135 aa20.63■□□□□ 0.89
FAM49B-214ENST00000519540 TCP11X2Q5H9J9 407 aa20.63■□□□□ 0.89
FAM49B-214ENST00000519540 TTI2Q6NXR4 508 aa20.63■□□□□ 0.89
FAM49B-214ENST00000519540 IRF2BP1Q8IU81 584 aa20.63■□□□□ 0.89
FAM49B-214ENST00000519540 KIAA0895Q8NCT3 520 aa20.63■□□□□ 0.89
FAM49B-214ENST00000519540 HPS3Q969F9 1004 aa20.63■□□□□ 0.89
FAM49B-214ENST00000519540 DNAJC19Q96DA6 116 aa20.63■□□□□ 0.89
FAM49B-214ENST00000519540 SSC5DA1L4H1 1573 aa20.63■□□□□ 0.89
FAM49B-214ENST00000519540 KCNJ18B7U540 433 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms