RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 CALM3P0DP25 149 aa10.81□□□□□ -0.68
HDAC3-215ENST00000519474 MYCLP12524 364 aaPredicted RBP10.81□□□□□ -0.68
HDAC3-215ENST00000519474 SP2Q02086 613 aa10.81□□□□□ -0.68
HDAC3-215ENST00000519474 PGM5Q15124 567 aa10.81□□□□□ -0.68
HDAC3-215ENST00000519474 PPP2R5BQ15173 497 aa10.81□□□□□ -0.68
HDAC3-215ENST00000519474 MFSD5Q6N075 450 aa10.81□□□□□ -0.68
HDAC3-215ENST00000519474 GPR153Q6NV75 609 aa10.81□□□□□ -0.68
HDAC3-215ENST00000519474 FCHSD1Q86WN1 690 aa10.81□□□□□ -0.68
HDAC3-215ENST00000519474 IL31RAQ8NI17 732 aa10.81□□□□□ -0.68
HDAC3-215ENST00000519474 AFG1LQ8WV93 481 aa10.81□□□□□ -0.68
HDAC3-215ENST00000519474 RRP36Q96EU6 259 aaKnown RBP10.81□□□□□ -0.68
HDAC3-215ENST00000519474 SEZ6LQ9BYH1 1024 aa10.81□□□□□ -0.68
HDAC3-215ENST00000519474 TRPV6Q9H1D0 765 aa10.81□□□□□ -0.68
HDAC3-215ENST00000519474 FAM217BQ9NTX9 383 aaPredicted RBP10.81□□□□□ -0.68
HDAC3-215ENST00000519474 SLC12A7Q9Y666 1083 aa10.81□□□□□ -0.68
HDAC3-215ENST00000519474 MROH7Q68CQ1 1323 aa10.81□□□□□ -0.68
HDAC3-215ENST00000519474 hCG_1642624A0A1W2PR95 340 aa10.8□□□□□ -0.68
HDAC3-215ENST00000519474 TLR3O15455 904 aaKnown RBP10.8□□□□□ -0.68
HDAC3-215ENST00000519474 B4GALT4O60513 344 aa10.8□□□□□ -0.68
HDAC3-215ENST00000519474 KPNA6O60684 536 aa10.8□□□□□ -0.68
HDAC3-215ENST00000519474 GH1P01241 217 aa10.8□□□□□ -0.68
HDAC3-215ENST00000519474 CPA1P15085 419 aa10.8□□□□□ -0.68
HDAC3-215ENST00000519474 HSPA4P34932 840 aa10.8□□□□□ -0.68
HDAC3-215ENST00000519474 CPT1AP50416 773 aa10.8□□□□□ -0.68
HDAC3-215ENST00000519474 MRPS9P82933 396 aaKnown RBP10.8□□□□□ -0.68
HDAC3-215ENST00000519474 ARHGAP1Q07960 439 aa10.8□□□□□ -0.68
HDAC3-215ENST00000519474 FUT2Q10981 343 aa10.8□□□□□ -0.68
HDAC3-215ENST00000519474 NBPF20Q3BBV1 942 aa10.8□□□□□ -0.68
HDAC3-215ENST00000519474 APOA5Q6Q788 366 aa10.8□□□□□ -0.68
HDAC3-215ENST00000519474 USP17L6PQ6QN14 398 aa10.8□□□□□ -0.68
HDAC3-215ENST00000519474 PPP1R13LQ8WUF5 828 aa10.8□□□□□ -0.68
HDAC3-215ENST00000519474 MTG1Q9BT17 334 aaPredicted RBP10.8□□□□□ -0.68
HDAC3-215ENST00000519474 BCAS3Q9H6U6 928 aa10.8□□□□□ -0.68
HDAC3-215ENST00000519474 PPP4R2Q9NY27 417 aa10.8□□□□□ -0.68
HDAC3-215ENST00000519474 SNX14Q9Y5W7 946 aa10.8□□□□□ -0.68
HDAC3-215ENST00000519474 MYH6P13533 1939 aa10.8□□□□□ -0.68
HDAC3-215ENST00000519474 TGFB3P10600 412 aa10.79□□□□□ -0.68
HDAC3-215ENST00000519474 CSF2RAP15509 400 aa10.79□□□□□ -0.68
HDAC3-215ENST00000519474 CYP2C18P33260 490 aa10.79□□□□□ -0.68
HDAC3-215ENST00000519474 FPGSQ05932 587 aa10.79□□□□□ -0.68
HDAC3-215ENST00000519474 KRT32Q14532 448 aa10.79□□□□□ -0.68
HDAC3-215ENST00000519474 TMEM240Q5SV17 173 aa10.79□□□□□ -0.68
HDAC3-215ENST00000519474 MYSM1Q5VVJ2 828 aa10.79□□□□□ -0.68
HDAC3-215ENST00000519474 SYNE3Q6ZMZ3 975 aa10.79□□□□□ -0.68
HDAC3-215ENST00000519474 TMTC3Q6ZXV5 915 aa10.79□□□□□ -0.68
HDAC3-215ENST00000519474 KAT2BQ92831 832 aa10.79□□□□□ -0.68
HDAC3-215ENST00000519474 GPKOWQ92917 476 aaPredicted RBP eCLIP10.79□□□□□ -0.68
HDAC3-215ENST00000519474 USP26Q9BXU7 913 aa10.79□□□□□ -0.68
HDAC3-215ENST00000519474 PPP1R12CQ9BZL4 782 aa10.79□□□□□ -0.68
HDAC3-215ENST00000519474 ALDH8A1Q9H2A2 487 aaPredicted RBP10.79□□□□□ -0.68
HDAC3-215ENST00000519474 RTEL1Q9NZ71 1219 aa10.79□□□□□ -0.68
HDAC3-215ENST00000519474 PIK3CDO00329 1044 aa10.78□□□□□ -0.68
HDAC3-215ENST00000519474 CASTP20810 708 aaKnown RBP10.78□□□□□ -0.68
HDAC3-215ENST00000519474 CDC27P30260 824 aa10.78□□□□□ -0.68
HDAC3-215ENST00000519474 CCND2P30279 289 aa10.78□□□□□ -0.68
HDAC3-215ENST00000519474 ADD1P35611 737 aaKnown RBP10.78□□□□□ -0.68
HDAC3-215ENST00000519474 LAMC2Q13753 1193 aa10.78□□□□□ -0.68
HDAC3-215ENST00000519474 BRDTQ58F21 947 aaPredicted RBP10.78□□□□□ -0.68
HDAC3-215ENST00000519474 CELF3Q5SZQ8 465 aaKnown RBP10.78□□□□□ -0.68
HDAC3-215ENST00000519474 KCNV1Q6PIU1 500 aa10.78□□□□□ -0.68
HDAC3-215ENST00000519474 Q7L0L9 218 aa10.78□□□□□ -0.68
HDAC3-215ENST00000519474 DHX37Q8IY37 1157 aaKnown RBP10.78□□□□□ -0.68
HDAC3-215ENST00000519474 EMID1Q96A84 441 aaPredicted RBP10.78□□□□□ -0.68
HDAC3-215ENST00000519474 VWCEQ96DN2 955 aa10.78□□□□□ -0.68
HDAC3-215ENST00000519474 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.78□□□□□ -0.686e-10■■■■■ 27
HDAC3-215ENST00000519474 NOC4LQ9BVI4 516 aaKnown RBP10.78□□□□□ -0.68
HDAC3-215ENST00000519474 PSTPIP2Q9H939 334 aa10.78□□□□□ -0.68
HDAC3-215ENST00000519474 TRMT13Q9NUP7 481 aaKnown RBP10.78□□□□□ -0.68
HDAC3-215ENST00000519474 MTMR10Q9NXD2 777 aa10.78□□□□□ -0.68
HDAC3-215ENST00000519474 MRVI1Q9Y6F6 885 aa10.78□□□□□ -0.68
HDAC3-215ENST00000519474 V9GY48 417 aaPredicted RBP10.78□□□□□ -0.68
HDAC3-215ENST00000519474 UMODL1Q5DID0 1318 aa10.78□□□□□ -0.68
HDAC3-215ENST00000519474 LRRC37A2A6NM11 1700 aa10.78□□□□□ -0.68
HDAC3-215ENST00000519474 SPATA31C2B4DYI2 1134 aa10.77□□□□□ -0.69
HDAC3-215ENST00000519474 ZBTB43O43298 467 aa10.77□□□□□ -0.69
HDAC3-215ENST00000519474 PPFIA4O75335 1185 aa10.77□□□□□ -0.69
HDAC3-215ENST00000519474 MMP3P08254 477 aa10.77□□□□□ -0.69
HDAC3-215ENST00000519474 SUPT20HL2P0C7V6 817 aa10.77□□□□□ -0.69
HDAC3-215ENST00000519474 ACRP10323 421 aa10.77□□□□□ -0.69
HDAC3-215ENST00000519474 CYP2C9P11712 490 aa10.77□□□□□ -0.69
HDAC3-215ENST00000519474 ICAM3P32942 547 aa10.77□□□□□ -0.69
HDAC3-215ENST00000519474 CCL23P55773 120 aa10.77□□□□□ -0.69
HDAC3-215ENST00000519474 PTPN11Q06124 597 aaPredicted RBP10.77□□□□□ -0.69
HDAC3-215ENST00000519474 SEMA3FQ13275 785 aa10.77□□□□□ -0.69
HDAC3-215ENST00000519474 FAM109BQ6ICB4 259 aaPredicted RBP10.77□□□□□ -0.69
HDAC3-215ENST00000519474 NFRKBQ6P4R8 1299 aa10.77□□□□□ -0.69
HDAC3-215ENST00000519474 Q6ZUG5 572 aa10.77□□□□□ -0.69
HDAC3-215ENST00000519474 ZNF365Q70YC5 407 aa10.77□□□□□ -0.69
HDAC3-215ENST00000519474 MICU3Q86XE3 530 aa10.77□□□□□ -0.69
HDAC3-215ENST00000519474 FBXL16Q8N461 479 aa10.77□□□□□ -0.69
HDAC3-215ENST00000519474 TMEM199Q8N511 208 aa10.77□□□□□ -0.69
HDAC3-215ENST00000519474 DEFB123Q8N688 67 aa10.77□□□□□ -0.69
HDAC3-215ENST00000519474 SMARCC2Q8TAQ2 1214 aa10.77□□□□□ -0.69
HDAC3-215ENST00000519474 JAKMIP1Q96N16 626 aaKnown RBP10.77□□□□□ -0.69
HDAC3-215ENST00000519474 AGXT2Q9BYV1 514 aa10.77□□□□□ -0.69
HDAC3-215ENST00000519474 HIPK3Q9H422 1215 aa10.77□□□□□ -0.69
HDAC3-215ENST00000519474 RBM28Q9NW13 759 aaKnown RBP10.77□□□□□ -0.69
HDAC3-215ENST00000519474 SEC63Q9UGP8 760 aaKnown RBP10.77□□□□□ -0.69
HDAC3-215ENST00000519474 LTBP2Q14767 1821 aa10.77□□□□□ -0.69
HDAC3-215ENST00000519474 KLF18A0A0U1RQI7 1052 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms