RNA–Protein interactions for RNA: ENST00000519253.5

PCM1-212, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best) BASIC

Gene PCM1, Length 6,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-212ENST00000519253 PPP2R2AP63151 447 aa9.32□□□□□ -0.92
PCM1-212ENST00000519253 PLCB4Q15147 1175 aa9.32□□□□□ -0.92
PCM1-212ENST00000519253 PFKFB3Q16875 520 aaPredicted RBP9.32□□□□□ -0.92
PCM1-212ENST00000519253 AP1ARQ63HQ0 302 aa9.32□□□□□ -0.92
PCM1-212ENST00000519253 ISCA1Q9BUE6 129 aa9.32□□□□□ -0.92
PCM1-212ENST00000519253 TRIM10Q9UDY6 481 aa9.32□□□□□ -0.92
PCM1-212ENST00000519253 SPATA31D1Q6ZQQ2 1576 aa9.32□□□□□ -0.92
PCM1-212ENST00000519253 HLA-DOAP06340 250 aa9.32□□□□□ -0.92
PCM1-212ENST00000519253 LRIG3Q6UXM1 1119 aa9.32□□□□□ -0.92
PCM1-212ENST00000519253 PHF20Q9BVI0 1012 aa9.32□□□□□ -0.92
PCM1-212ENST00000519253 BRIP1Q9BX63 1249 aa9.32□□□□□ -0.92
PCM1-212ENST00000519253 CEP72Q9P209 647 aa9.32□□□□□ -0.92
PCM1-212ENST00000519253 LRRC53A6NM62 1247 aa9.32□□□□□ -0.92
PCM1-212ENST00000519253 GSG1L2A8MUP6 293 aa9.32□□□□□ -0.92
PCM1-212ENST00000519253 KLRF2D3W0D1 207 aa9.32□□□□□ -0.92
PCM1-212ENST00000519253 RPSAP08865 295 aaKnown RBP9.32□□□□□ -0.92
PCM1-212ENST00000519253 GUCY1A3Q02108 690 aa9.32□□□□□ -0.92
PCM1-212ENST00000519253 ITIH3Q06033 890 aa9.32□□□□□ -0.92
PCM1-212ENST00000519253 NLRP10Q86W26 655 aa9.32□□□□□ -0.92
PCM1-212ENST00000519253 ZSCAN29Q8IWY8 852 aaPredicted RBP9.32□□□□□ -0.92
PCM1-212ENST00000519253 SH2D4AQ9H788 454 aa9.32□□□□□ -0.92
PCM1-212ENST00000519253 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.32□□□□□ -0.92
PCM1-212ENST00000519253 IKBKGQ9Y6K9 419 aa9.32□□□□□ -0.92
PCM1-212ENST00000519253 PNPLA7Q6ZV29 1317 aa9.32□□□□□ -0.92
PCM1-212ENST00000519253 SSU72P8A0A1W2PR75 194 aa9.31□□□□□ -0.92
PCM1-212ENST00000519253 ZNF185O15231 689 aa9.31□□□□□ -0.92
PCM1-212ENST00000519253 PALMO75781 387 aa9.31□□□□□ -0.92
PCM1-212ENST00000519253 FAM107AO95990 144 aa9.31□□□□□ -0.92
PCM1-212ENST00000519253 GRIN1Q05586 938 aa9.31□□□□□ -0.92
PCM1-212ENST00000519253 PPP2R5AQ15172 486 aa9.31□□□□□ -0.92
PCM1-212ENST00000519253 PROM2Q8N271 834 aa9.31□□□□□ -0.92
PCM1-212ENST00000519253 C3orf20Q8ND61 904 aa9.31□□□□□ -0.92
PCM1-212ENST00000519253 MAIP1Q8WWC4 291 aa9.31□□□□□ -0.92
PCM1-212ENST00000519253 KLHL29Q96CT2 875 aa9.31□□□□□ -0.92
PCM1-212ENST00000519253 NOP53Q9NZM5 478 aaKnown RBP9.31□□□□□ -0.92
PCM1-212ENST00000519253 A0A1W2PQJ5 194 aa9.31□□□□□ -0.92
PCM1-212ENST00000519253 ELF1P32519 619 aa9.31□□□□□ -0.92
PCM1-212ENST00000519253 RASGRP4Q8TDF6 673 aa9.31□□□□□ -0.92
PCM1-212ENST00000519253 FMO2Q99518 471 aa9.31□□□□□ -0.92
PCM1-212ENST00000519253 PANK4Q9NVE7 773 aa9.31□□□□□ -0.92
PCM1-212ENST00000519253 ASIC3Q9UHC3 531 aa9.31□□□□□ -0.92
PCM1-212ENST00000519253 ATP8A1Q9Y2Q0 1164 aa9.31□□□□□ -0.92
PCM1-212ENST00000519253 PDS5AQ29RF7 1337 aaKnown RBP9.31□□□□□ -0.92
PCM1-212ENST00000519253 CYP27B1O15528 508 aa9.31□□□□□ -0.92
PCM1-212ENST00000519253 GAS8O95995 478 aa9.31□□□□□ -0.92
PCM1-212ENST00000519253 EXOC3L4Q17RC7 722 aa9.31□□□□□ -0.92
PCM1-212ENST00000519253 FYB2Q5VWT5 728 aa9.31□□□□□ -0.92
PCM1-212ENST00000519253 CCDC174Q6PII3 467 aa9.31□□□□□ -0.92
PCM1-212ENST00000519253 STMN2Q93045 179 aa9.31□□□□□ -0.92
PCM1-212ENST00000519253 TBC1D7Q9P0N9 293 aa9.31□□□□□ -0.92
PCM1-212ENST00000519253 DNM3Q9UQ16 869 aa9.31□□□□□ -0.92
PCM1-212ENST00000519253 SART1O43290 800 aaKnown RBP9.31□□□□□ -0.92
PCM1-212ENST00000519253 FERP16591 822 aa9.31□□□□□ -0.92
PCM1-212ENST00000519253 CTNNA2P26232 953 aa9.31□□□□□ -0.92
PCM1-212ENST00000519253 UNC13DQ70J99 1090 aa9.31□□□□□ -0.92
PCM1-212ENST00000519253 ENAHQ8N8S7 591 aaPredicted RBP9.31□□□□□ -0.92
PCM1-212ENST00000519253 SMCR8Q8TEV9 937 aaPredicted RBP9.31□□□□□ -0.92
PCM1-212ENST00000519253 PSMD1Q99460 953 aa9.31□□□□□ -0.92
PCM1-212ENST00000519253 CCSER1Q9C0I3 900 aa9.31□□□□□ -0.92
PCM1-212ENST00000519253 INTS13Q9NVM9 706 aa9.31□□□□□ -0.92
PCM1-212ENST00000519253 ADAMTS1Q9UHI8 967 aa9.31□□□□□ -0.92
PCM1-212ENST00000519253 ESYT3A0FGR9 886 aa9.31□□□□□ -0.92
PCM1-212ENST00000519253 SPDYE3A6NKU9 549 aa9.31□□□□□ -0.92
PCM1-212ENST00000519253 RHOBTB3O94955 611 aa9.31□□□□□ -0.92
PCM1-212ENST00000519253 RBBP5Q15291 538 aaKnown RBP9.31□□□□□ -0.92
PCM1-212ENST00000519253 KDM7AQ6ZMT4 941 aa9.31□□□□□ -0.92
PCM1-212ENST00000519253 KRT26Q7Z3Y9 468 aa9.31□□□□□ -0.92
PCM1-212ENST00000519253 DGKHQ86XP1 1220 aa9.31□□□□□ -0.92
PCM1-212ENST00000519253 WDR66Q8TBY9 1149 aa9.31□□□□□ -0.92
PCM1-212ENST00000519253 HVCN1Q96D96 273 aa9.31□□□□□ -0.92
PCM1-212ENST00000519253 STK38LQ9Y2H1 464 aa9.31□□□□□ -0.92
PCM1-212ENST00000519253 ZNF365Q70YC5 407 aa9.31□□□□□ -0.92
PCM1-212ENST00000519253 ZNF804AQ7Z570 1209 aa9.31□□□□□ -0.92
PCM1-212ENST00000519253 PLA2G12BQ9BX93 195 aa9.31□□□□□ -0.92
PCM1-212ENST00000519253 NBPF5PQ86XG9 351 aaPredicted RBP9.3□□□□□ -0.92
PCM1-212ENST00000519253 TEX11Q8IYF3 940 aa9.3□□□□□ -0.92
PCM1-212ENST00000519253 SH2D3CQ8N5H7 860 aa9.3□□□□□ -0.92
PCM1-212ENST00000519253 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.3□□□□□ -0.926e-8■■□□□ 11.8
PCM1-212ENST00000519253 BCRP11274 1271 aa9.3□□□□□ -0.92
PCM1-212ENST00000519253 CD44P16070 742 aaKnown RBP9.3□□□□□ -0.92
PCM1-212ENST00000519253 LMNB1P20700 586 aa9.3□□□□□ -0.92
PCM1-212ENST00000519253 CDK17Q00537 523 aa9.3□□□□□ -0.92
PCM1-212ENST00000519253 C6orf118Q5T5N4 469 aa9.3□□□□□ -0.92
PCM1-212ENST00000519253 GSTA5Q7RTV2 222 aa9.3□□□□□ -0.92
PCM1-212ENST00000519253 GPBP1Q86WP2 473 aa9.3□□□□□ -0.92
PCM1-212ENST00000519253 TMEM139Q8IV31 216 aa9.3□□□□□ -0.92
PCM1-212ENST00000519253 GUF1Q8N442 669 aaKnown RBP9.3□□□□□ -0.92
PCM1-212ENST00000519253 ZIM3Q96PE6 472 aa9.3□□□□□ -0.92
PCM1-212ENST00000519253 BIN2Q9UBW5 565 aaPredicted RBP9.3□□□□□ -0.92
PCM1-212ENST00000519253 CFAP73A6NFT4 308 aa9.3□□□□□ -0.92
PCM1-212ENST00000519253 LRRC10BA6NIK2 292 aa9.3□□□□□ -0.92
PCM1-212ENST00000519253 TOB1P50616 345 aaPredicted RBP9.3□□□□□ -0.92
PCM1-212ENST00000519253 ACTN3Q08043 901 aaPredicted RBP9.3□□□□□ -0.92
PCM1-212ENST00000519253 NTRK3Q16288 839 aa9.3□□□□□ -0.92
PCM1-212ENST00000519253 PTGISQ16647 500 aa9.3□□□□□ -0.92
PCM1-212ENST00000519253 NAA35Q5VZE5 725 aa9.3□□□□□ -0.92
PCM1-212ENST00000519253 NYXQ9GZU5 481 aa9.3□□□□□ -0.92
PCM1-212ENST00000519253 IQCGQ9H095 443 aaKnown RBP9.3□□□□□ -0.92
PCM1-212ENST00000519253 TMEM131LA2VDJ0 1609 aa9.3□□□□□ -0.92
PCM1-212ENST00000519253 JCADQ9P266 1359 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms