RNA–Protein interactions for RNA: ENST00000517479.1

CDK16-209, Transcript of cyclin dependent kinase 16, humanhuman

TSL 4

Gene CDK16, Length 520 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK16-209ENST00000517479 HSPA4P34932 840 aa16.91■□□□□ 0.3
CDK16-209ENST00000517479 CPT1AP50416 773 aa16.91■□□□□ 0.3
CDK16-209ENST00000517479 MRPL12P52815 198 aaKnown RBP16.91■□□□□ 0.3
CDK16-209ENST00000517479 USP17L6PQ6QN14 398 aa16.91■□□□□ 0.3
CDK16-209ENST00000517479 AFG1LQ8WV93 481 aa16.91■□□□□ 0.3
CDK16-209ENST00000517479 DDX41Q9UJV9 622 aaKnown RBP16.91■□□□□ 0.3
CDK16-209ENST00000517479 CNTNAP5Q8WYK1 1306 aa16.91■□□□□ 0.3
CDK16-209ENST00000517479 EIF3JO75822 258 aaKnown RBP16.9■□□□□ 0.3
CDK16-209ENST00000517479 TIMP1P01033 207 aa16.9■□□□□ 0.3
CDK16-209ENST00000517479 MMP3P08254 477 aa16.9■□□□□ 0.3
CDK16-209ENST00000517479 CALM1P0DP23 149 aa16.9■□□□□ 0.3
CDK16-209ENST00000517479 CALM2P0DP24 149 aa16.9■□□□□ 0.3
CDK16-209ENST00000517479 CALM3P0DP25 149 aa16.9■□□□□ 0.3
CDK16-209ENST00000517479 SMARCA1P28370 1054 aa16.9■□□□□ 0.3
CDK16-209ENST00000517479 Q7L0L9 218 aa16.9■□□□□ 0.3
CDK16-209ENST00000517479 JAKMIP1Q96N16 626 aaKnown RBP16.9■□□□□ 0.3
CDK16-209ENST00000517479 TRMT13Q9NUP7 481 aaKnown RBP16.9■□□□□ 0.3
CDK16-209ENST00000517479 PPP4R2Q9NY27 417 aa16.9■□□□□ 0.3
CDK16-209ENST00000517479 MAP3K20Q9NYL2 800 aaKnown RBP16.9■□□□□ 0.3
CDK16-209ENST00000517479 SEC63Q9UGP8 760 aaKnown RBP16.9■□□□□ 0.3
CDK16-209ENST00000517479 MRVI1Q9Y6F6 885 aa16.9■□□□□ 0.3
CDK16-209ENST00000517479 KLF18A0A0U1RQI7 1052 aa16.89■□□□□ 0.29
CDK16-209ENST00000517479 MEIS2O14770 477 aa16.89■□□□□ 0.29
CDK16-209ENST00000517479 GH1P01241 217 aa16.89■□□□□ 0.29
CDK16-209ENST00000517479 CDC27P30260 824 aa16.89■□□□□ 0.29
CDK16-209ENST00000517479 CYP2C18P33260 490 aa16.89■□□□□ 0.29
CDK16-209ENST00000517479 GNAQP50148 359 aa16.89■□□□□ 0.29
CDK16-209ENST00000517479 MRPS9P82933 396 aaKnown RBP16.89■□□□□ 0.29
CDK16-209ENST00000517479 SP2Q02086 613 aa16.89■□□□□ 0.29
CDK16-209ENST00000517479 KRT32Q14532 448 aa16.89■□□□□ 0.29
CDK16-209ENST00000517479 VSIG10LQ86VR7 867 aa16.89■□□□□ 0.29
CDK16-209ENST00000517479 LZTS2Q9BRK4 669 aa16.89■□□□□ 0.29
CDK16-209ENST00000517479 MTG1Q9BT17 334 aaPredicted RBP16.89■□□□□ 0.29
CDK16-209ENST00000517479 ALDH8A1Q9H2A2 487 aaPredicted RBP16.89■□□□□ 0.29
CDK16-209ENST00000517479 BCAS3Q9H6U6 928 aa16.89■□□□□ 0.29
CDK16-209ENST00000517479 FAM217BQ9NTX9 383 aaPredicted RBP16.89■□□□□ 0.29
CDK16-209ENST00000517479 POLR3EQ9NVU0 708 aa16.89■□□□□ 0.29
CDK16-209ENST00000517479 FRMPD4Q14CM0 1322 aa16.89■□□□□ 0.29
CDK16-209ENST00000517479 TLR3O15455 904 aaKnown RBP16.88■□□□□ 0.29
CDK16-209ENST00000517479 ZBTB43O43298 467 aa16.88■□□□□ 0.29
CDK16-209ENST00000517479 CHMP4BP1P59074 171 aa16.88■□□□□ 0.29
CDK16-209ENST00000517479 FPGSQ05932 587 aa16.88■□□□□ 0.29
CDK16-209ENST00000517479 APOBRQ0VD83 1088 aa16.88■□□□□ 0.29
CDK16-209ENST00000517479 FUT2Q10981 343 aa16.88■□□□□ 0.29
CDK16-209ENST00000517479 UBE2SQ16763 222 aa16.88■□□□□ 0.29
CDK16-209ENST00000517479 RTN1Q16799 776 aa16.88■□□□□ 0.29
CDK16-209ENST00000517479 NBPF20Q3BBV1 942 aa16.88■□□□□ 0.29
CDK16-209ENST00000517479 TYW1BQ6NUM6 668 aa16.88■□□□□ 0.29
CDK16-209ENST00000517479 Q6ZUG5 572 aa16.88■□□□□ 0.29
CDK16-209ENST00000517479 SAMD3Q8N6K7 520 aa16.88■□□□□ 0.29
CDK16-209ENST00000517479 GOLGA8AA7E2F4 631 aa16.87■□□□□ 0.29
CDK16-209ENST00000517479 GOLGA8BA8MQT2 603 aa16.87■□□□□ 0.29
CDK16-209ENST00000517479 ACRP10323 421 aa16.87■□□□□ 0.29
CDK16-209ENST00000517479 CYP2C9P11712 490 aa16.87■□□□□ 0.29
CDK16-209ENST00000517479 CSF2RAP15509 400 aa16.87■□□□□ 0.29
CDK16-209ENST00000517479 UBA1P22314 1058 aaKnown RBP16.87■□□□□ 0.29
CDK16-209ENST00000517479 CCND2P30279 289 aa16.87■□□□□ 0.29
CDK16-209ENST00000517479 TRAF1Q13077 416 aa16.87■□□□□ 0.29
CDK16-209ENST00000517479 FAM47CQ5HY64 1035 aa16.87■□□□□ 0.29
CDK16-209ENST00000517479 MFSD5Q6N075 450 aa16.87■□□□□ 0.29
CDK16-209ENST00000517479 C16orf59Q7L2K0 433 aa16.87■□□□□ 0.29
CDK16-209ENST00000517479 HEATR3Q7Z4Q2 680 aa16.87■□□□□ 0.29
CDK16-209ENST00000517479 SMARCC2Q8TAQ2 1214 aa16.87■□□□□ 0.29
CDK16-209ENST00000517479 KAT2BQ92831 832 aa16.87■□□□□ 0.29
CDK16-209ENST00000517479 RTEL1Q9NZ71 1219 aa16.87■□□□□ 0.29
CDK16-209ENST00000517479 NAP1L2Q9ULW6 460 aaPredicted RBP16.87■□□□□ 0.29
CDK16-209ENST00000517479 TELO2Q9Y4R8 837 aa16.87■□□□□ 0.29
CDK16-209ENST00000517479 TET1Q8NFU7 2136 aa16.87■□□□□ 0.29
CDK16-209ENST00000517479 ZNF286BP0CG31 522 aa16.86■□□□□ 0.29
CDK16-209ENST00000517479 CCL23P55773 120 aa16.86■□□□□ 0.29
CDK16-209ENST00000517479 SEMA3FQ13275 785 aa16.86■□□□□ 0.29
CDK16-209ENST00000517479 WWC2Q6AWC2 1192 aa16.86■□□□□ 0.29
CDK16-209ENST00000517479 SYNE3Q6ZMZ3 975 aa16.86■□□□□ 0.29
CDK16-209ENST00000517479 BRF1Q92994 677 aa16.86■□□□□ 0.29
CDK16-209ENST00000517479 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.86■□□□□ 0.29
CDK16-209ENST00000517479 NOC4LQ9BVI4 516 aaKnown RBP16.86■□□□□ 0.29
CDK16-209ENST00000517479 WNT8AQ9H1J5 351 aa16.86■□□□□ 0.29
CDK16-209ENST00000517479 HIPK3Q9H422 1215 aa16.86■□□□□ 0.29
CDK16-209ENST00000517479 PIK3CDO00329 1044 aa16.85■□□□□ 0.29
CDK16-209ENST00000517479 REC8O95072 547 aa16.85■□□□□ 0.29
CDK16-209ENST00000517479 GGPS1O95749 300 aa16.85■□□□□ 0.29
CDK16-209ENST00000517479 RPS6KB1P23443 525 aa16.85■□□□□ 0.29
CDK16-209ENST00000517479 ADD1P35611 737 aaKnown RBP16.85■□□□□ 0.29
CDK16-209ENST00000517479 HSDL1Q3SXM5 330 aa16.85■□□□□ 0.29
CDK16-209ENST00000517479 BRDTQ58F21 947 aaPredicted RBP16.85■□□□□ 0.29
CDK16-209ENST00000517479 MYSM1Q5VVJ2 828 aa16.85■□□□□ 0.29
CDK16-209ENST00000517479 BLOC1S2Q6QNY1 142 aa16.85■□□□□ 0.29
CDK16-209ENST00000517479 DHX37Q8IY37 1157 aaKnown RBP16.85■□□□□ 0.29
CDK16-209ENST00000517479 RBM28Q9NW13 759 aaKnown RBP16.85■□□□□ 0.29
CDK16-209ENST00000517479 CDH23Q9H251 3354 aa16.85■□□□□ 0.29
CDK16-209ENST00000517479 PPFIA3O75145 1194 aa16.84■□□□□ 0.29
CDK16-209ENST00000517479 HMGB1P09429 215 aaKnown RBP16.84■□□□□ 0.29
CDK16-209ENST00000517479 CASTP20810 708 aaKnown RBP16.84■□□□□ 0.29
CDK16-209ENST00000517479 FGD1P98174 961 aa16.84■□□□□ 0.29
CDK16-209ENST00000517479 CELF3Q5SZQ8 465 aaKnown RBP16.84■□□□□ 0.29
CDK16-209ENST00000517479 FAM109BQ6ICB4 259 aaPredicted RBP16.84■□□□□ 0.29
CDK16-209ENST00000517479 CUL5Q93034 780 aa16.84■□□□□ 0.29
CDK16-209ENST00000517479 EMID1Q96A84 441 aaPredicted RBP16.84■□□□□ 0.29
CDK16-209ENST00000517479 VWCEQ96DN2 955 aa16.84■□□□□ 0.29
CDK16-209ENST00000517479 SCLYQ96I15 445 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms