RNA–Protein interactions for RNA: ENST00000517181.1

RNU1-54P-201, Transcript of RNA, U1 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU1-54P, Length 120 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-54P-201ENST00000517181 VMACQ2NL98 169 aa4.38□□□□□ -1.71
RNU1-54P-201ENST00000517181 MROH9Q5TGP6 573 aa4.38□□□□□ -1.71
RNU1-54P-201ENST00000517181 SP8Q8IXZ3 490 aa4.38□□□□□ -1.71
RNU1-54P-201ENST00000517181 NLGN1Q8N2Q7 840 aa4.38□□□□□ -1.71
RNU1-54P-201ENST00000517181 ST13P5Q8NFI4 369 aaPredicted RBP4.38□□□□□ -1.71
RNU1-54P-201ENST00000517181 SEC14L1Q92503 715 aa4.38□□□□□ -1.71
RNU1-54P-201ENST00000517181 ZNF669Q96BR6 464 aaPredicted RBP4.38□□□□□ -1.71
RNU1-54P-201ENST00000517181 ZCCHC4Q9H5U6 513 aa4.38□□□□□ -1.71
RNU1-54P-201ENST00000517181 LRP2BPQ9P2M1 347 aa4.38□□□□□ -1.71
RNU1-54P-201ENST00000517181 OTOL1A6NHN0 477 aaPredicted RBP4.37□□□□□ -1.71
RNU1-54P-201ENST00000517181 DLX3O60479 287 aa4.37□□□□□ -1.71
RNU1-54P-201ENST00000517181 C8BP07358 591 aa4.37□□□□□ -1.71
RNU1-54P-201ENST00000517181 LCP1P13796 627 aa4.37□□□□□ -1.71
RNU1-54P-201ENST00000517181 BCL6P41182 706 aa4.37□□□□□ -1.71
RNU1-54P-201ENST00000517181 LIPIQ6XZB0 460 aa4.37□□□□□ -1.71
RNU1-54P-201ENST00000517181 PPIL6Q8IXY8 311 aa4.37□□□□□ -1.71
RNU1-54P-201ENST00000517181 SMARCC2Q8TAQ2 1214 aa4.37□□□□□ -1.71
RNU1-54P-201ENST00000517181 USP33Q8TEY7 942 aa4.37□□□□□ -1.71
RNU1-54P-201ENST00000517181 NOX5Q96PH1 765 aa4.37□□□□□ -1.71
RNU1-54P-201ENST00000517181 ARHGEF4Q9NR80 690 aa4.37□□□□□ -1.71
RNU1-54P-201ENST00000517181 ST7Q9NRC1 585 aa4.37□□□□□ -1.71
RNU1-54P-201ENST00000517181 PODXL2Q9NZ53 605 aa4.37□□□□□ -1.71
RNU1-54P-201ENST00000517181 H7BY64 318 aa4.36□□□□□ -1.71
RNU1-54P-201ENST00000517181 SASH1O94885 1247 aa4.36□□□□□ -1.71
RNU1-54P-201ENST00000517181 FGFR1P11362 822 aa4.36□□□□□ -1.71
RNU1-54P-201ENST00000517181 SLURP1P55000 103 aa4.36□□□□□ -1.71
RNU1-54P-201ENST00000517181 CTSWP56202 376 aa4.36□□□□□ -1.71
RNU1-54P-201ENST00000517181 EMC4Q5J8M3 183 aa4.36□□□□□ -1.71
RNU1-54P-201ENST00000517181 CEP68Q76N32 757 aa4.36□□□□□ -1.71
RNU1-54P-201ENST00000517181 SYT8Q8NBV8 401 aa4.36□□□□□ -1.71
RNU1-54P-201ENST00000517181 ZNF526Q8TF50 670 aaPredicted RBP4.36□□□□□ -1.71
RNU1-54P-201ENST00000517181 KCTD13Q8WZ19 329 aa4.36□□□□□ -1.71
RNU1-54P-201ENST00000517181 OSBP2Q969R2 916 aa4.36□□□□□ -1.71
RNU1-54P-201ENST00000517181 AP5M1Q9H0R1 490 aa4.36□□□□□ -1.71
RNU1-54P-201ENST00000517181 SPATA6Q9NWH7 488 aaPredicted RBP4.36□□□□□ -1.71
RNU1-54P-201ENST00000517181 PALD1Q9ULE6 856 aa4.36□□□□□ -1.71
RNU1-54P-201ENST00000517181 ZNF652Q9Y2D9 606 aa4.36□□□□□ -1.71
RNU1-54P-201ENST00000517181 FAN1Q9Y2M0 1017 aa4.36□□□□□ -1.71
RNU1-54P-201ENST00000517181 PMF1-BGLAPU3KQ54 211 aa4.36□□□□□ -1.71
RNU1-54P-201ENST00000517181 AGRPO00253 132 aa4.35□□□□□ -1.71
RNU1-54P-201ENST00000517181 TADA3O75528 432 aa4.35□□□□□ -1.71
RNU1-54P-201ENST00000517181 LSAMPQ13449 338 aa4.35□□□□□ -1.71
RNU1-54P-201ENST00000517181 NTRK3Q16288 839 aa4.35□□□□□ -1.71
RNU1-54P-201ENST00000517181 NAALADL2Q58DX5 795 aa4.35□□□□□ -1.71
RNU1-54P-201ENST00000517181 RSPO2Q6UXX9 243 aaPredicted RBP4.35□□□□□ -1.71
RNU1-54P-201ENST00000517181 ETV3LQ6ZN32 361 aa4.35□□□□□ -1.71
RNU1-54P-201ENST00000517181 FRMD5Q7Z6J6 570 aa4.35□□□□□ -1.71
RNU1-54P-201ENST00000517181 FAM126BQ8IXS8 530 aa4.35□□□□□ -1.71
RNU1-54P-201ENST00000517181 FEZF2Q8TBJ5 459 aa4.35□□□□□ -1.71
RNU1-54P-201ENST00000517181 TRMT2BQ96GJ1 504 aaKnown RBP4.35□□□□□ -1.71
RNU1-54P-201ENST00000517181 TMEM169Q96HH4 297 aa4.35□□□□□ -1.71
RNU1-54P-201ENST00000517181 C8orf37Q96NL8 207 aa4.35□□□□□ -1.71
RNU1-54P-201ENST00000517181 GORASP1Q9BQQ3 440 aa4.35□□□□□ -1.71
RNU1-54P-201ENST00000517181 IER2Q9BTL4 223 aa4.35□□□□□ -1.71
RNU1-54P-201ENST00000517181 GPR27Q9NS67 375 aa4.35□□□□□ -1.71
RNU1-54P-201ENST00000517181 PCDHA2Q9Y5H9 948 aa4.35□□□□□ -1.71
RNU1-54P-201ENST00000517181 NCANO14594 1321 aa4.35□□□□□ -1.71
RNU1-54P-201ENST00000517181 A0A1B0GTL3 188 aa4.34□□□□□ -1.71
RNU1-54P-201ENST00000517181 IQCA1LA6NCM1 817 aa4.34□□□□□ -1.71
RNU1-54P-201ENST00000517181 MYO1BO43795 1136 aa4.34□□□□□ -1.71
RNU1-54P-201ENST00000517181 ADCY3O60266 1144 aa4.34□□□□□ -1.71
RNU1-54P-201ENST00000517181 CYP2C8P10632 490 aa4.34□□□□□ -1.71
RNU1-54P-201ENST00000517181 KCNJ6P48051 423 aa4.34□□□□□ -1.71
RNU1-54P-201ENST00000517181 HSP90AA2PQ14568 343 aaPredicted RBP4.34□□□□□ -1.71
RNU1-54P-201ENST00000517181 CR1LQ2VPA4 569 aa4.34□□□□□ -1.71
RNU1-54P-201ENST00000517181 PRR31Q5SQ13 230 aa4.34□□□□□ -1.71
RNU1-54P-201ENST00000517181 NBPF6Q5VWK0 638 aa4.34□□□□□ -1.71
RNU1-54P-201ENST00000517181 ADGRG2Q8IZP9 1017 aa4.34□□□□□ -1.71
RNU1-54P-201ENST00000517181 FAM26EQ8N5C1 309 aa4.34□□□□□ -1.71
RNU1-54P-201ENST00000517181 CXorf38Q8TB03 319 aa4.34□□□□□ -1.71
RNU1-54P-201ENST00000517181 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.34□□□□□ -1.71
RNU1-54P-201ENST00000517181 NBPF4Q96M43 638 aa4.34□□□□□ -1.71
RNU1-54P-201ENST00000517181 TEPSINQ96N21 525 aa4.34□□□□□ -1.71
RNU1-54P-201ENST00000517181 AARSD1Q9BTE6 412 aaKnown RBP4.34□□□□□ -1.71
RNU1-54P-201ENST00000517181 C11orf84Q9BUA3 381 aaPredicted RBP4.34□□□□□ -1.71
RNU1-54P-201ENST00000517181 PDGFDQ9GZP0 370 aaPredicted RBP4.34□□□□□ -1.71
RNU1-54P-201ENST00000517181 PCDH18Q9HCL0 1135 aa4.34□□□□□ -1.71
RNU1-54P-201ENST00000517181 BTG4Q9NY30 223 aa4.34□□□□□ -1.71
RNU1-54P-201ENST00000517181 HSPBP1Q9NZL4 362 aa4.34□□□□□ -1.71
RNU1-54P-201ENST00000517181 R3HCC1Q9Y3T6 440 aaKnown RBP4.34□□□□□ -1.71
RNU1-54P-201ENST00000517181 TCRBV5S2A0A599 114 aa4.33□□□□□ -1.72
RNU1-54P-201ENST00000517181 PRRG2O14669 202 aa4.33□□□□□ -1.72
RNU1-54P-201ENST00000517181 NOBOXO60393 691 aa4.33□□□□□ -1.72
RNU1-54P-201ENST00000517181 FOXD2O60548 495 aaPredicted RBP4.33□□□□□ -1.72
RNU1-54P-201ENST00000517181 MSCO60682 206 aa4.33□□□□□ -1.72
RNU1-54P-201ENST00000517181 PABPC1P11940 636 aaKnown RBP4.33□□□□□ -1.72
RNU1-54P-201ENST00000517181 THBS2P35442 1172 aa4.33□□□□□ -1.72
RNU1-54P-201ENST00000517181 NFIXQ14938 502 aa4.33□□□□□ -1.72
RNU1-54P-201ENST00000517181 ZFYVE27Q5T4F4 411 aa4.33□□□□□ -1.72
RNU1-54P-201ENST00000517181 MILR1Q7Z6M3 343 aa4.33□□□□□ -1.72
RNU1-54P-201ENST00000517181 CARFQ8N187 725 aa4.33□□□□□ -1.72
RNU1-54P-201ENST00000517181 RELTQ969Z4 430 aa4.33□□□□□ -1.72
RNU1-54P-201ENST00000517181 DDX11Q96FC9 970 aa4.33□□□□□ -1.72
RNU1-54P-201ENST00000517181 SYT3Q9BQG1 590 aa4.33□□□□□ -1.72
RNU1-54P-201ENST00000517181 KRTAP9-3Q9BYQ3 159 aa4.33□□□□□ -1.72
RNU1-54P-201ENST00000517181 EPB41L1Q9H4G0 881 aa4.33□□□□□ -1.72
RNU1-54P-201ENST00000517181 HGSO14964 777 aaPredicted RBP4.32□□□□□ -1.72
RNU1-54P-201ENST00000517181 KCNC1P48547 511 aa4.32□□□□□ -1.72
RNU1-54P-201ENST00000517181 ITGA1P56199 1179 aa4.32□□□□□ -1.72
RNU1-54P-201ENST00000517181 SERINC3Q13530 473 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms