RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 RGL3Q3MIN7 710 aa5.17□□□□□ -1.58
HERC4-215ENST00000515753 TBC1D10BQ4KMP7 808 aaPredicted RBP5.17□□□□□ -1.58
HERC4-215ENST00000515753 ARHGEF39Q8N4T4 335 aa5.17□□□□□ -1.58
HERC4-215ENST00000515753 SUGT1Q9Y2Z0 365 aa5.17□□□□□ -1.58
HERC4-215ENST00000515753 MATN3O15232 486 aa5.16□□□□□ -1.58
HERC4-215ENST00000515753 FXNQ16595 210 aa5.16□□□□□ -1.58
HERC4-215ENST00000515753 MBLAC2Q68D91 279 aa5.16□□□□□ -1.58
HERC4-215ENST00000515753 MCTP2Q6DN12 878 aa5.16□□□□□ -1.58
HERC4-215ENST00000515753 KIAA1211LQ6NV74 962 aa5.16□□□□□ -1.58
HERC4-215ENST00000515753 CRACR2BQ8N4Y2 399 aaPredicted RBP5.16□□□□□ -1.58
HERC4-215ENST00000515753 LINC00482Q8N8I6 264 aa5.16□□□□□ -1.58
HERC4-215ENST00000515753 C11orf84Q9BUA3 381 aaPredicted RBP5.16□□□□□ -1.58
HERC4-215ENST00000515753 KRTAP3-1Q9BYR8 98 aa5.16□□□□□ -1.58
HERC4-215ENST00000515753 GPRC5CQ9NQ84 441 aa5.16□□□□□ -1.58
HERC4-215ENST00000515753 BTG4Q9NY30 223 aa5.16□□□□□ -1.58
HERC4-215ENST00000515753 MARCH2Q9P0N8 246 aa5.16□□□□□ -1.58
HERC4-215ENST00000515753 CLEC1BQ9P126 229 aa5.16□□□□□ -1.58
HERC4-215ENST00000515753 INVSQ9Y283 1065 aa5.16□□□□□ -1.58
HERC4-215ENST00000515753 MRVI1Q9Y6F6 885 aa5.16□□□□□ -1.58
HERC4-215ENST00000515753 KLF4O43474 513 aa5.15□□□□□ -1.59
HERC4-215ENST00000515753 NPHS1O60500 1241 aa5.15□□□□□ -1.59
HERC4-215ENST00000515753 FSHBP01225 129 aa5.15□□□□□ -1.59
HERC4-215ENST00000515753 ZNF20P17024 532 aa5.15□□□□□ -1.59
HERC4-215ENST00000515753 NBPF6Q5VWK0 638 aa5.15□□□□□ -1.59
HERC4-215ENST00000515753 CPZQ66K79 652 aa5.15□□□□□ -1.59
HERC4-215ENST00000515753 CD300LDQ6UXZ3 194 aa5.15□□□□□ -1.59
HERC4-215ENST00000515753 FAM178BQ8IXR5 827 aa5.15□□□□□ -1.59
HERC4-215ENST00000515753 PLEKHO2Q8TD55 490 aa5.15□□□□□ -1.59
HERC4-215ENST00000515753 NBPF4Q96M43 638 aa5.15□□□□□ -1.59
HERC4-215ENST00000515753 EPN3Q9H201 632 aa5.15□□□□□ -1.59
HERC4-215ENST00000515753 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.15□□□□□ -1.59
HERC4-215ENST00000515753 PLATP00750 562 aa5.14□□□□□ -1.59
HERC4-215ENST00000515753 PLS3P13797 630 aa5.14□□□□□ -1.59
HERC4-215ENST00000515753 THBS2P35442 1172 aa5.14□□□□□ -1.59
HERC4-215ENST00000515753 POMZP3Q6PJE2 187 aa5.14□□□□□ -1.59
HERC4-215ENST00000515753 C6orf15Q6UXA7 325 aaPredicted RBP5.14□□□□□ -1.59
HERC4-215ENST00000515753 ETV3LQ6ZN32 361 aa5.14□□□□□ -1.59
HERC4-215ENST00000515753 LIMS2Q7Z4I7 341 aa5.14□□□□□ -1.59
HERC4-215ENST00000515753 TEX2Q8IWB9 1127 aa5.14□□□□□ -1.59
HERC4-215ENST00000515753 DPF3Q92784 378 aa5.14□□□□□ -1.59
HERC4-215ENST00000515753 APEX2Q9UBZ4 518 aa5.14□□□□□ -1.59
HERC4-215ENST00000515753 ST6GALNAC2Q9UJ37 374 aa5.14□□□□□ -1.59
HERC4-215ENST00000515753 EMC9Q9Y3B6 208 aa5.14□□□□□ -1.59
HERC4-215ENST00000515753 ZNF536O15090 1300 aa5.14□□□□□ -1.59
HERC4-215ENST00000515753 DDX3XO00571 662 aaKnown RBP eCLIP5.13□□□□□ -1.59
HERC4-215ENST00000515753 SGSM2O43147 1006 aa5.13□□□□□ -1.59
HERC4-215ENST00000515753 SUSD5O60279 629 aa5.13□□□□□ -1.59
HERC4-215ENST00000515753 KCNH1O95259 989 aa5.13□□□□□ -1.59
HERC4-215ENST00000515753 RPL13P26373 211 aaKnown RBP5.13□□□□□ -1.59
HERC4-215ENST00000515753 SCRN1Q12765 414 aa5.13□□□□□ -1.59
HERC4-215ENST00000515753 DDR2Q16832 855 aa5.13□□□□□ -1.59
HERC4-215ENST00000515753 MRM1Q6IN84 353 aaKnown RBP5.13□□□□□ -1.59
HERC4-215ENST00000515753 KYQ8NBH2 561 aa5.13□□□□□ -1.59
HERC4-215ENST00000515753 SLC16A11Q8NCK7 471 aa5.13□□□□□ -1.59
HERC4-215ENST00000515753 BVESQ8NE79 360 aa5.13□□□□□ -1.59
HERC4-215ENST00000515753 CHST13Q8NET6 341 aa5.13□□□□□ -1.59
HERC4-215ENST00000515753 SAMD11Q96NU1 681 aa5.13□□□□□ -1.59
HERC4-215ENST00000515753 APBA2Q99767 749 aa5.13□□□□□ -1.59
HERC4-215ENST00000515753 AKT3Q9Y243 479 aa5.13□□□□□ -1.59
HERC4-215ENST00000515753 TRBV23OR9-2A0A075B6M9 112 aa5.12□□□□□ -1.59
HERC4-215ENST00000515753 MROH6A6NGR9 719 aa5.12□□□□□ -1.59
HERC4-215ENST00000515753 B2RBV5 119 aa5.12□□□□□ -1.59
HERC4-215ENST00000515753 STAT5AP42229 794 aa5.12□□□□□ -1.59
HERC4-215ENST00000515753 KIAA2012Q0VF49 1180 aa5.12□□□□□ -1.59
HERC4-215ENST00000515753 RAB33AQ14088 237 aa5.12□□□□□ -1.59
HERC4-215ENST00000515753 INF2Q27J81 1249 aa5.12□□□□□ -1.59
HERC4-215ENST00000515753 LARP1BQ659C4 914 aaKnown RBP5.12□□□□□ -1.59
HERC4-215ENST00000515753 ANKS3Q6ZW76 656 aa5.12□□□□□ -1.59
HERC4-215ENST00000515753 DCP2Q8IU60 420 aaKnown RBP5.12□□□□□ -1.59
HERC4-215ENST00000515753 TRIM59Q8IWR1 403 aa5.12□□□□□ -1.59
HERC4-215ENST00000515753 LGI4Q8N135 537 aa5.12□□□□□ -1.59
HERC4-215ENST00000515753 TXNDC5Q8NBS9 432 aaKnown RBP5.12□□□□□ -1.59
HERC4-215ENST00000515753 HNRNPLLQ8WVV9 542 aaKnown RBP5.12□□□□□ -1.59
HERC4-215ENST00000515753 ZNF669Q96BR6 464 aaPredicted RBP5.12□□□□□ -1.59
HERC4-215ENST00000515753 MRGPRX3Q96LB0 322 aa5.12□□□□□ -1.59
HERC4-215ENST00000515753 LGR4Q9BXB1 951 aa5.12□□□□□ -1.59
HERC4-215ENST00000515753 AP5M1Q9H0R1 490 aa5.12□□□□□ -1.59
HERC4-215ENST00000515753 MSRB2Q9Y3D2 182 aa5.12□□□□□ -1.59
HERC4-215ENST00000515753 C22orf46C9J442 243 aa5.11□□□□□ -1.59
HERC4-215ENST00000515753 STK10O94804 968 aaKnown RBP5.11□□□□□ -1.59
HERC4-215ENST00000515753 GJB6O95452 261 aa5.11□□□□□ -1.59
HERC4-215ENST00000515753 CAPNS1P04632 268 aa5.11□□□□□ -1.59
HERC4-215ENST00000515753 THBDP07204 575 aa5.11□□□□□ -1.59
HERC4-215ENST00000515753 ITGA1P56199 1179 aa5.11□□□□□ -1.59
HERC4-215ENST00000515753 SF3A1Q15459 793 aaKnown RBP5.11□□□□□ -1.59
HERC4-215ENST00000515753 EEPD1Q7L9B9 569 aa5.11□□□□□ -1.59
HERC4-215ENST00000515753 SPRED1Q7Z699 444 aa5.11□□□□□ -1.59
HERC4-215ENST00000515753 MILR1Q7Z6M3 343 aa5.11□□□□□ -1.59
HERC4-215ENST00000515753 CELF2-AS1Q8N7Q2 184 aa5.11□□□□□ -1.59
HERC4-215ENST00000515753 MICAL1Q8TDZ2 1067 aa5.11□□□□□ -1.59
HERC4-215ENST00000515753 COPS5Q92905 334 aa5.11□□□□□ -1.59
HERC4-215ENST00000515753 SSBP3Q9BWW4 388 aaPredicted RBP5.11□□□□□ -1.59
HERC4-215ENST00000515753 C1QTNF3Q9BXJ4 246 aa5.11□□□□□ -1.59
HERC4-215ENST00000515753 TANGO6Q9C0B7 1094 aa5.11□□□□□ -1.59
HERC4-215ENST00000515753 SCAND2PQ9GZW5 306 aaPredicted RBP5.11□□□□□ -1.59
HERC4-215ENST00000515753 R3HCC1Q9Y3T6 440 aaKnown RBP5.11□□□□□ -1.59
HERC4-215ENST00000515753 SCG5P05408 212 aa5.1□□□□□ -1.59
HERC4-215ENST00000515753 FPR2P25090 351 aa5.1□□□□□ -1.59
HERC4-215ENST00000515753 TESK1Q15569 626 aa5.1□□□□□ -1.59
HERC4-215ENST00000515753 SLC10A6Q3KNW5 377 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms