RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-223ENST00000515459 CXCL10P02778 98 aa18.44■□□□□ 0.54
LMNA-223ENST00000515459 PDE1AP54750 535 aa18.44■□□□□ 0.54
LMNA-223ENST00000515459 DEFB103AP81534 67 aa18.44■□□□□ 0.54
LMNA-223ENST00000515459 RBL2Q08999 1139 aa18.44■□□□□ 0.54
LMNA-223ENST00000515459 CDC37Q16543 378 aaPredicted RBP18.44■□□□□ 0.54
LMNA-223ENST00000515459 DGKDQ16760 1214 aa18.44■□□□□ 0.54
LMNA-223ENST00000515459 ZNF589Q86UQ0 364 aaPredicted RBP18.44■□□□□ 0.54
LMNA-223ENST00000515459 C7orf31Q8N865 590 aa18.44■□□□□ 0.54
LMNA-223ENST00000515459 SYTL5Q8TDW5 730 aaPredicted RBP18.44■□□□□ 0.54
LMNA-223ENST00000515459 TBC1D5Q92609 795 aa18.44■□□□□ 0.54
LMNA-223ENST00000515459 DHX38Q92620 1227 aaKnown RBP18.44■□□□□ 0.54
LMNA-223ENST00000515459 ESR2Q92731 530 aa18.44■□□□□ 0.54
LMNA-223ENST00000515459 IWS1Q96ST2 819 aa18.44■□□□□ 0.54
LMNA-223ENST00000515459 UBA5Q9GZZ9 404 aa18.44■□□□□ 0.54
LMNA-223ENST00000515459 CPVLQ9H3G5 476 aa18.44■□□□□ 0.54
LMNA-223ENST00000515459 RNF41Q9H4P4 317 aaPredicted RBP18.44■□□□□ 0.54
LMNA-223ENST00000515459 ABCB11O95342 1321 aa18.44■□□□□ 0.54
LMNA-223ENST00000515459 SIP14410 1827 aa18.44■□□□□ 0.54
LMNA-223ENST00000515459 ABHD14A-ACY1A0A1B0GW23 586 aa18.43■□□□□ 0.54
LMNA-223ENST00000515459 NBNO60934 754 aa18.43■□□□□ 0.54
LMNA-223ENST00000515459 GJB5O95377 273 aa18.43■□□□□ 0.54
LMNA-223ENST00000515459 CKBP12277 381 aa18.43■□□□□ 0.54
LMNA-223ENST00000515459 NMIQ13287 307 aaPredicted RBP18.43■□□□□ 0.54
LMNA-223ENST00000515459 TMEM31Q5JXX7 168 aa18.43■□□□□ 0.54
LMNA-223ENST00000515459 DGKHQ86XP1 1220 aa18.43■□□□□ 0.54
LMNA-223ENST00000515459 MCF2L2Q86YR7 1114 aa18.43■□□□□ 0.54
LMNA-223ENST00000515459 TBC1D10CQ8IV04 446 aa18.43■□□□□ 0.54
LMNA-223ENST00000515459 GDPD5Q8WTR4 605 aa18.43■□□□□ 0.54
LMNA-223ENST00000515459 RMDN3Q96TC7 470 aa18.43■□□□□ 0.54
LMNA-223ENST00000515459 RAD9AQ99638 391 aa18.43■□□□□ 0.54
LMNA-223ENST00000515459 ZKSCAN3Q9BRR0 538 aa18.43■□□□□ 0.54
LMNA-223ENST00000515459 KATNAL1Q9BW62 490 aa18.43■□□□□ 0.54
LMNA-223ENST00000515459 COL20A1Q9P218 1284 aa18.43■□□□□ 0.54
LMNA-223ENST00000515459 HDAC6Q9UBN7 1215 aa18.43■□□□□ 0.54
LMNA-223ENST00000515459 CCDC171Q6TFL3 1326 aa18.43■□□□□ 0.54
LMNA-223ENST00000515459 MYH7BA7E2Y1 1941 aa18.43■□□□□ 0.54
LMNA-223ENST00000515459 EFCAB14O75071 495 aa18.42■□□□□ 0.54
LMNA-223ENST00000515459 IKBKEQ14164 716 aa18.42■□□□□ 0.54
LMNA-223ENST00000515459 EMID1Q96A84 441 aaPredicted RBP18.42■□□□□ 0.54
LMNA-223ENST00000515459 TGS1Q96RS0 853 aaKnown RBP18.42■□□□□ 0.54
LMNA-223ENST00000515459 ALG1Q9BT22 464 aa18.42■□□□□ 0.54
LMNA-223ENST00000515459 SUGCTQ9HAC7 445 aa18.42■□□□□ 0.54
LMNA-223ENST00000515459 DDX41Q9UJV9 622 aaKnown RBP18.42■□□□□ 0.54
LMNA-223ENST00000515459 MTUS1Q9ULD2 1270 aa18.42■□□□□ 0.54
LMNA-223ENST00000515459 PSEN2P49810 448 aa18.41■□□□□ 0.54
LMNA-223ENST00000515459 ERVK-21P61565 698 aa18.41■□□□□ 0.54
LMNA-223ENST00000515459 CCDC178Q5BJE1 867 aa18.41■□□□□ 0.54
LMNA-223ENST00000515459 ARHGEF16Q5VV41 709 aa18.41■□□□□ 0.54
LMNA-223ENST00000515459 ADGRF4Q8IZF3 695 aa18.41■□□□□ 0.54
LMNA-223ENST00000515459 PNMA1Q8ND90 353 aa18.41■□□□□ 0.54
LMNA-223ENST00000515459 MRPL11Q9Y3B7 192 aaKnown RBP18.41■□□□□ 0.54
LMNA-223ENST00000515459 NEDD4P46934 1319 aa18.41■□□□□ 0.54
LMNA-223ENST00000515459 LAMA4Q16363 1823 aa18.4■□□□□ 0.54
LMNA-223ENST00000515459 LINC01553A4QN01 128 aa18.4■□□□□ 0.54
LMNA-223ENST00000515459 EIF3JO75822 258 aaKnown RBP18.4■□□□□ 0.54
LMNA-223ENST00000515459 HOXD11P31277 338 aaPredicted RBP18.4■□□□□ 0.54
LMNA-223ENST00000515459 NT5C2P49902 561 aa18.4■□□□□ 0.54
LMNA-223ENST00000515459 MFAP1P55081 439 aaKnown RBP18.4■□□□□ 0.54
LMNA-223ENST00000515459 PTK7Q13308 1070 aa18.4■□□□□ 0.54
LMNA-223ENST00000515459 LAMC2Q13753 1193 aa18.4■□□□□ 0.54
LMNA-223ENST00000515459 MFSD10Q14728 455 aa18.4■□□□□ 0.54
LMNA-223ENST00000515459 KIAA0753Q2KHM9 967 aa18.4■□□□□ 0.54
LMNA-223ENST00000515459 TCTN1Q2MV58 587 aa18.4■□□□□ 0.54
LMNA-223ENST00000515459 ASPRV1Q53RT3 343 aa18.4■□□□□ 0.54
LMNA-223ENST00000515459 IQCA1Q86XH1 822 aa18.4■□□□□ 0.54
LMNA-223ENST00000515459 CRBNQ96SW2 442 aa18.4■□□□□ 0.54
LMNA-223ENST00000515459 KAT14Q9H8E8 782 aa18.4■□□□□ 0.54
LMNA-223ENST00000515459 MRVI1Q9Y6F6 885 aa18.4■□□□□ 0.54
LMNA-223ENST00000515459 TRIM6-TRIM34B2RNG4 842 aa18.39■□□□□ 0.53
LMNA-223ENST00000515459 HAS3O00219 553 aa18.39■□□□□ 0.53
LMNA-223ENST00000515459 ZNF213O14771 459 aa18.39■□□□□ 0.53
LMNA-223ENST00000515459 DHX16O60231 1041 aaKnown RBP18.39■□□□□ 0.53
LMNA-223ENST00000515459 GPR37L1O60883 481 aa18.39■□□□□ 0.53
LMNA-223ENST00000515459 F2P00734 622 aa18.39■□□□□ 0.53
LMNA-223ENST00000515459 ZNF286BP0CG31 522 aa18.39■□□□□ 0.53
LMNA-223ENST00000515459 EIF2AK2P19525 551 aaKnown RBP18.39■□□□□ 0.53
LMNA-223ENST00000515459 QRICH1Q2TAL8 776 aa18.39■□□□□ 0.53
LMNA-223ENST00000515459 ZNF618Q5T7W0 954 aa18.39■□□□□ 0.53
LMNA-223ENST00000515459 FBXO11Q86XK2 927 aa18.39■□□□□ 0.53
LMNA-223ENST00000515459 PPTC7Q8NI37 304 aa18.39■□□□□ 0.53
LMNA-223ENST00000515459 KHSRPQ92945 711 aaKnown RBP eCLIP18.39■□□□□ 0.53
LMNA-223ENST00000515459 UBE2ZQ9H832 354 aaPredicted RBP18.39■□□□□ 0.53
LMNA-223ENST00000515459 BRWD1Q9NSI6 2320 aa18.38■□□□□ 0.53
LMNA-223ENST00000515459 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.38■□□□□ 0.53
LMNA-223ENST00000515459 KDM4AO75164 1064 aa18.38■□□□□ 0.53
LMNA-223ENST00000515459 NR3C2P08235 984 aa18.38■□□□□ 0.53
LMNA-223ENST00000515459 TRIM71Q2Q1W2 868 aaKnown RBP18.38■□□□□ 0.53
LMNA-223ENST00000515459 FAM117BQ6P1L5 589 aa18.38■□□□□ 0.53
LMNA-223ENST00000515459 DHX37Q8IY37 1157 aaKnown RBP18.38■□□□□ 0.53
LMNA-223ENST00000515459 ANKS1AQ92625 1134 aa18.38■□□□□ 0.53
LMNA-223ENST00000515459 C11orf16Q9NQ32 467 aa18.38■□□□□ 0.53
LMNA-223ENST00000515459 PXMP2Q9NR77 195 aa18.38■□□□□ 0.53
LMNA-223ENST00000515459 PI4K2BG5E9Z4 385 aa18.37■□□□□ 0.53
LMNA-223ENST00000515459 LGR5O75473 907 aa18.37■□□□□ 0.53
LMNA-223ENST00000515459 CFBP00751 764 aa18.37■□□□□ 0.53
LMNA-223ENST00000515459 PARP1P09874 1014 aaKnown RBP18.37■□□□□ 0.53
LMNA-223ENST00000515459 TRAF7Q6Q0C0 670 aa18.37■□□□□ 0.53
LMNA-223ENST00000515459 RILPL2Q969X0 211 aa18.37■□□□□ 0.53
LMNA-223ENST00000515459 ZSCAN10Q96SZ4 725 aaPredicted RBP18.37■□□□□ 0.53
LMNA-223ENST00000515459 JMJD4Q9H9V9 463 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms