RNA–Protein interactions for RNA: ENST00000514705.5

TSPAN17-208, Transcript of tetraspanin 17, humanhuman

TSL 2

Gene TSPAN17, Length 4,445 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-208ENST00000514705 PNPLA7Q6ZV29 1317 aa15.3■□□□□ 0.04
TSPAN17-208ENST00000514705 PDE2AO00408 941 aaPredicted RBP15.29■□□□□ 0.04
TSPAN17-208ENST00000514705 EIF3HO15372 352 aaKnown RBP eCLIP15.29■□□□□ 0.04
TSPAN17-208ENST00000514705 PEX26Q7Z412 305 aa15.29■□□□□ 0.04
TSPAN17-208ENST00000514705 ZNF512BQ96KM6 892 aaPredicted RBP15.29■□□□□ 0.04
TSPAN17-208ENST00000514705 RBM12Q9NTZ6 932 aaKnown RBP15.29■□□□□ 0.04
TSPAN17-208ENST00000514705 PDXDC2PQ6P474 469 aa15.29■□□□□ 0.04
TSPAN17-208ENST00000514705 PNMA8AQ86V59 439 aaPredicted RBP15.29■□□□□ 0.04
TSPAN17-208ENST00000514705 CCDC25Q86WR0 208 aa15.29■□□□□ 0.04
TSPAN17-208ENST00000514705 FAM133AQ8N9E0 248 aa15.29■□□□□ 0.04
TSPAN17-208ENST00000514705 AP1M1Q9BXS5 423 aa15.29■□□□□ 0.04
TSPAN17-208ENST00000514705 F8W031 263 aaPredicted RBP15.29■□□□□ 0.04
TSPAN17-208ENST00000514705 PPP1R12BO60237 982 aaPredicted RBP15.29■□□□□ 0.04
TSPAN17-208ENST00000514705 VEGFAP15692 232 aaPredicted RBP15.29■□□□□ 0.04
TSPAN17-208ENST00000514705 PRDX5P30044 214 aa15.29■□□□□ 0.04
TSPAN17-208ENST00000514705 SLC1A4P43007 532 aa15.29■□□□□ 0.04
TSPAN17-208ENST00000514705 MECOMQ03112 1051 aa15.29■□□□□ 0.04
TSPAN17-208ENST00000514705 RUFY4Q6ZNE9 571 aa15.29■□□□□ 0.04
TSPAN17-208ENST00000514705 NLGN1Q8N2Q7 840 aa15.29■□□□□ 0.04
TSPAN17-208ENST00000514705 LARP4BQ92615 738 aaKnown RBP15.29■□□□□ 0.04
TSPAN17-208ENST00000514705 KRIT1O00522 736 aa15.29■□□□□ 0.04
TSPAN17-208ENST00000514705 VIMP08670 466 aaKnown RBP15.29■□□□□ 0.04
TSPAN17-208ENST00000514705 CCDC65Q8IXS2 484 aa15.29■□□□□ 0.04
TSPAN17-208ENST00000514705 CETN3O15182 167 aa15.28■□□□□ 0.04
TSPAN17-208ENST00000514705 CARSP49589 748 aaKnown RBP15.28■□□□□ 0.04
TSPAN17-208ENST00000514705 SEC24CP53992 1094 aa15.28■□□□□ 0.04
TSPAN17-208ENST00000514705 E2F5Q15329 346 aa15.28■□□□□ 0.04
TSPAN17-208ENST00000514705 PAPD7Q5XG87 772 aaKnown RBP15.28■□□□□ 0.04
TSPAN17-208ENST00000514705 FRMPD2Q68DX3 1309 aaPredicted RBP15.28■□□□□ 0.04
TSPAN17-208ENST00000514705 USP17L2Q6R6M4 530 aa15.28■□□□□ 0.04
TSPAN17-208ENST00000514705 SLC44A5Q8NCS7 719 aa15.28■□□□□ 0.04
TSPAN17-208ENST00000514705 BAIAP2L1Q9UHR4 511 aa15.28■□□□□ 0.04
TSPAN17-208ENST00000514705 PLEKHG2Q9H7P9 1386 aa15.28■□□□□ 0.04
TSPAN17-208ENST00000514705 SH3RF1Q7Z6J0 888 aa15.28■□□□□ 0.04
TSPAN17-208ENST00000514705 ADGRA1Q86SQ6 560 aa15.28■□□□□ 0.04
TSPAN17-208ENST00000514705 DNAJC7Q99615 494 aa15.28■□□□□ 0.04
TSPAN17-208ENST00000514705 MTA3Q9BTC8 594 aa15.28■□□□□ 0.04
TSPAN17-208ENST00000514705 ZC3H12CQ9C0D7 883 aaKnown RBP15.28■□□□□ 0.04
TSPAN17-208ENST00000514705 RGPD8O14715 1765 aaPredicted RBP15.28■□□□□ 0.04
TSPAN17-208ENST00000514705 RPS8P62241 208 aaKnown RBP15.28■□□□□ 0.04
TSPAN17-208ENST00000514705 CCDC26Q8TAB7 109 aa15.28■□□□□ 0.04
TSPAN17-208ENST00000514705 PLAAQ9Y263 795 aa15.28■□□□□ 0.04
TSPAN17-208ENST00000514705 REXO2Q9Y3B8 237 aaKnown RBP15.28■□□□□ 0.04
TSPAN17-208ENST00000514705 GOLGA6L10A0A0M3HER8 536 aa15.27■□□□□ 0.04
TSPAN17-208ENST00000514705 PBX1P40424 430 aa15.27■□□□□ 0.04
TSPAN17-208ENST00000514705 APBA1Q02410 837 aa15.27■□□□□ 0.04
TSPAN17-208ENST00000514705 SEC23AQ15436 765 aa15.27■□□□□ 0.04
TSPAN17-208ENST00000514705 ZSCAN29Q8IWY8 852 aaPredicted RBP15.27■□□□□ 0.04
TSPAN17-208ENST00000514705 ZIM3Q96PE6 472 aa15.27■□□□□ 0.04
TSPAN17-208ENST00000514705 TRIM9Q9C026 710 aa15.27■□□□□ 0.04
TSPAN17-208ENST00000514705 RCCD1A6NED2 376 aa15.27■□□□□ 0.04
TSPAN17-208ENST00000514705 DCP1AQ9NPI6 582 aaPredicted RBP15.27■□□□□ 0.04
TSPAN17-208ENST00000514705 PDS5AQ29RF7 1337 aaKnown RBP15.27■□□□□ 0.03
TSPAN17-208ENST00000514705 CNTNAP5Q8WYK1 1306 aa15.27■□□□□ 0.03
TSPAN17-208ENST00000514705 ABCB4P21439 1286 aa15.27■□□□□ 0.03
TSPAN17-208ENST00000514705 NAA25Q14CX7 972 aa15.27■□□□□ 0.03
TSPAN17-208ENST00000514705 FAM26FQ5R3K3 315 aa15.27■□□□□ 0.03
TSPAN17-208ENST00000514705 LMBR1Q8WVP7 490 aa15.27■□□□□ 0.03
TSPAN17-208ENST00000514705 BRIP1Q9BX63 1249 aa15.27■□□□□ 0.03
TSPAN17-208ENST00000514705 MYO1FO00160 1098 aa15.27■□□□□ 0.03
TSPAN17-208ENST00000514705 CACNA2D3Q8IZS8 1091 aa15.27■□□□□ 0.03
TSPAN17-208ENST00000514705 CCDC155Q8N6L0 562 aa15.27■□□□□ 0.03
TSPAN17-208ENST00000514705 ANKS4BQ8N8V4 417 aa15.27■□□□□ 0.03
TSPAN17-208ENST00000514705 SPATA20Q8TB22 786 aa15.27■□□□□ 0.03
TSPAN17-208ENST00000514705 IQCDQ96DY2 449 aa15.27■□□□□ 0.03
TSPAN17-208ENST00000514705 ATP8A2Q9NTI2 1148 aa15.27■□□□□ 0.03
TSPAN17-208ENST00000514705 MYL1P05976 194 aa15.26■□□□□ 0.03
TSPAN17-208ENST00000514705 AMPD2Q01433 879 aa15.26■□□□□ 0.03
TSPAN17-208ENST00000514705 CLEC4GQ6UXB4 293 aa15.26■□□□□ 0.03
TSPAN17-208ENST00000514705 TEX11Q8IYF3 940 aa15.26■□□□□ 0.03
TSPAN17-208ENST00000514705 GIMAP8Q8ND71 665 aaPredicted RBP15.26■□□□□ 0.03
TSPAN17-208ENST00000514705 EYA3Q99504 573 aa15.26■□□□□ 0.03
TSPAN17-208ENST00000514705 CUEDC2Q9H467 287 aa15.26■□□□□ 0.03
TSPAN17-208ENST00000514705 UTP11Q9Y3A2 253 aaKnown RBP15.26■□□□□ 0.03
TSPAN17-208ENST00000514705 FRMD3A2A2Y4 597 aa15.26■□□□□ 0.03
TSPAN17-208ENST00000514705 POTEMA6NI47 508 aa15.26■□□□□ 0.03
TSPAN17-208ENST00000514705 PCP11498 1178 aaKnown RBP15.26■□□□□ 0.03
TSPAN17-208ENST00000514705 ACTN3Q08043 901 aaPredicted RBP15.26■□□□□ 0.03
TSPAN17-208ENST00000514705 ZNF804AQ7Z570 1209 aa15.26■□□□□ 0.03
TSPAN17-208ENST00000514705 UBXN6Q9BZV1 441 aa15.26■□□□□ 0.03
TSPAN17-208ENST00000514705 SH2D4AQ9H788 454 aa15.26■□□□□ 0.03
TSPAN17-208ENST00000514705 TBCAO75347 108 aaKnown RBP15.26■□□□□ 0.03
TSPAN17-208ENST00000514705 GUCY2CP25092 1073 aa15.26■□□□□ 0.03
TSPAN17-208ENST00000514705 UBE4AQ14139 1066 aa15.26■□□□□ 0.03
TSPAN17-208ENST00000514705 AK8Q96MA6 479 aa15.26■□□□□ 0.03
TSPAN17-208ENST00000514705 PANK4Q9NVE7 773 aa15.26■□□□□ 0.03
TSPAN17-208ENST00000514705 NOVA2Q9UNW9 492 aaKnown RBP15.26■□□□□ 0.03
TSPAN17-208ENST00000514705 LRRC10BA6NIK2 292 aa15.25■□□□□ 0.03
TSPAN17-208ENST00000514705 RHOBTB3O94955 611 aa15.25■□□□□ 0.03
TSPAN17-208ENST00000514705 KCNB1Q14721 858 aa15.25■□□□□ 0.03
TSPAN17-208ENST00000514705 DIXDC1Q155Q3 683 aa15.25■□□□□ 0.03
TSPAN17-208ENST00000514705 APTXQ7Z2E3 356 aaKnown RBP15.25■□□□□ 0.03
TSPAN17-208ENST00000514705 SLF2Q8IX21 1173 aa15.25■□□□□ 0.03
TSPAN17-208ENST00000514705 U2AF1L4Q8WU68 220 aaKnown RBP15.25■□□□□ 0.03
TSPAN17-208ENST00000514705 COA7Q96BR5 231 aa15.25■□□□□ 0.03
TSPAN17-208ENST00000514705 PIGSQ96S52 555 aa15.25■□□□□ 0.03
TSPAN17-208ENST00000514705 CAMTA1Q9Y6Y1 1673 aa15.25■□□□□ 0.03
TSPAN17-208ENST00000514705 ZSCAN5CA6NGD5 496 aaPredicted RBP15.25■□□□□ 0.03
TSPAN17-208ENST00000514705 ADCY7P51828 1080 aa15.25■□□□□ 0.03
TSPAN17-208ENST00000514705 ADAM9Q13443 819 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms