RNA–Protein interactions for RNA: ENST00000514660.1

NEDD9-215, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 473 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-215ENST00000514660 CEP85Q6P2H3 762 aa12.56□□□□□ -0.4
NEDD9-215ENST00000514660 FBXO11Q86XK2 927 aa12.56□□□□□ -0.4
NEDD9-215ENST00000514660 MYOCDQ8IZQ8 938 aa12.56□□□□□ -0.4
NEDD9-215ENST00000514660 AFG1LQ8WV93 481 aa12.56□□□□□ -0.4
NEDD9-215ENST00000514660 STAG1Q8WVM7 1258 aa12.56□□□□□ -0.4
NEDD9-215ENST00000514660 FRAT1Q92837 279 aaPredicted RBP12.56□□□□□ -0.4
NEDD9-215ENST00000514660 MSLNLQ96KJ4 702 aa12.56□□□□□ -0.4
NEDD9-215ENST00000514660 STRBPQ96SI9 672 aaKnown RBP12.56□□□□□ -0.4
NEDD9-215ENST00000514660 FSD1Q9BTV5 496 aa12.56□□□□□ -0.4
NEDD9-215ENST00000514660 BOLA2Q9H3K6 86 aa12.56□□□□□ -0.4
NEDD9-215ENST00000514660 CTNNA3Q9UI47 895 aa12.56□□□□□ -0.4
NEDD9-215ENST00000514660 FAM50BQ9Y247 325 aa12.56□□□□□ -0.4
NEDD9-215ENST00000514660 GVINP1Q7Z2Y8 2422 aa12.55□□□□□ -0.4
NEDD9-215ENST00000514660 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.55□□□□□ -0.4
NEDD9-215ENST00000514660 MINDY4BA8MYZ0 360 aa12.55□□□□□ -0.4
NEDD9-215ENST00000514660 MMP3P08254 477 aa12.55□□□□□ -0.4
NEDD9-215ENST00000514660 FDX1P10109 184 aa12.55□□□□□ -0.4
NEDD9-215ENST00000514660 RLBP1P12271 317 aa12.55□□□□□ -0.4
NEDD9-215ENST00000514660 EDNRBP24530 442 aa12.55□□□□□ -0.4
NEDD9-215ENST00000514660 STAT2P52630 851 aa12.55□□□□□ -0.4
NEDD9-215ENST00000514660 PPP2R5BQ15173 497 aa12.55□□□□□ -0.4
NEDD9-215ENST00000514660 UBE3CQ15386 1083 aa12.55□□□□□ -0.4
NEDD9-215ENST00000514660 TTBK2Q6IQ55 1244 aa12.55□□□□□ -0.4
NEDD9-215ENST00000514660 CCDC62Q6P9F0 684 aa12.55□□□□□ -0.4
NEDD9-215ENST00000514660 ERMP1Q7Z2K6 904 aa12.55□□□□□ -0.4
NEDD9-215ENST00000514660 SUGP1Q8IWZ8 645 aaKnown RBP12.55□□□□□ -0.4
NEDD9-215ENST00000514660 RHPN1Q8TCX5 695 aa12.55□□□□□ -0.4
NEDD9-215ENST00000514660 CLEC4DQ8WXI8 215 aa12.55□□□□□ -0.4
NEDD9-215ENST00000514660 PRRX2Q99811 253 aa12.55□□□□□ -0.4
NEDD9-215ENST00000514660 MKNK2Q9HBH9 465 aa12.55□□□□□ -0.4
NEDD9-215ENST00000514660 PAG1Q9NWQ8 432 aa12.55□□□□□ -0.4
NEDD9-215ENST00000514660 CLEC1BQ9P126 229 aa12.55□□□□□ -0.4
NEDD9-215ENST00000514660 ARPP21Q9UBL0 812 aaPredicted RBP12.55□□□□□ -0.4
NEDD9-215ENST00000514660 GTF2IRD1Q9UHL9 959 aa12.55□□□□□ -0.4
NEDD9-215ENST00000514660 KPNA6O60684 536 aa12.54□□□□□ -0.4
NEDD9-215ENST00000514660 CSPG5O95196 566 aa12.54□□□□□ -0.4
NEDD9-215ENST00000514660 TTLL1O95922 423 aa12.54□□□□□ -0.4
NEDD9-215ENST00000514660 TXNP10599 105 aaKnown RBP12.54□□□□□ -0.4
NEDD9-215ENST00000514660 ARHGAP1Q07960 439 aa12.54□□□□□ -0.4
NEDD9-215ENST00000514660 ADAM15Q13444 863 aa12.54□□□□□ -0.4
NEDD9-215ENST00000514660 CBX2Q14781 532 aaPredicted RBP12.54□□□□□ -0.4
NEDD9-215ENST00000514660 GMCL1Q96IK5 515 aa12.54□□□□□ -0.4
NEDD9-215ENST00000514660 POP1Q99575 1024 aaKnown RBP12.54□□□□□ -0.4
NEDD9-215ENST00000514660 CCPG1Q9ULG6 757 aa12.54□□□□□ -0.4
NEDD9-215ENST00000514660 TRPC6Q9Y210 931 aa12.54□□□□□ -0.4
NEDD9-215ENST00000514660 VPS13AQ96RL7 3174 aa12.54□□□□□ -0.4
NEDD9-215ENST00000514660 MYH7BA7E2Y1 1941 aa12.53□□□□□ -0.4
NEDD9-215ENST00000514660 PLA2G6O60733 806 aa12.53□□□□□ -0.4
NEDD9-215ENST00000514660 ADGRD2Q7Z7M1 963 aa12.53□□□□□ -0.4
NEDD9-215ENST00000514660 FAM160B2Q86V87 743 aa12.53□□□□□ -0.4
NEDD9-215ENST00000514660 AMOTL1Q8IY63 956 aa12.53□□□□□ -0.4
NEDD9-215ENST00000514660 CCDC155Q8N6L0 562 aa12.53□□□□□ -0.4
NEDD9-215ENST00000514660 NEDD1Q8NHV4 660 aa12.53□□□□□ -0.4
NEDD9-215ENST00000514660 TOP1MTQ969P6 601 aa12.53□□□□□ -0.4
NEDD9-215ENST00000514660 SAMD11Q96NU1 681 aa12.53□□□□□ -0.4
NEDD9-215ENST00000514660 IGFLR1Q9H665 355 aa12.53□□□□□ -0.4
NEDD9-215ENST00000514660 CD207Q9UJ71 328 aa12.53□□□□□ -0.4
NEDD9-215ENST00000514660 SYNPO2Q9UMS6 1093 aa12.53□□□□□ -0.4
NEDD9-215ENST00000514660 PLIN4Q96Q06 1357 aa12.53□□□□□ -0.4
NEDD9-215ENST00000514660 KIAA1217Q5T5P2 1943 aa12.52□□□□□ -0.4
NEDD9-215ENST00000514660 DMDP11532 3685 aa12.52□□□□□ -0.4
NEDD9-215ENST00000514660 HAS3O00219 553 aa12.52□□□□□ -0.41
NEDD9-215ENST00000514660 NKRFO15226 690 aaKnown RBP eCLIP12.52□□□□□ -0.41
NEDD9-215ENST00000514660 NMT2O60551 498 aa12.52□□□□□ -0.41
NEDD9-215ENST00000514660 EFCAB14O75071 495 aa12.52□□□□□ -0.41
NEDD9-215ENST00000514660 UPP2O95045 317 aa12.52□□□□□ -0.41
NEDD9-215ENST00000514660 EYA4O95677 639 aa12.52□□□□□ -0.41
NEDD9-215ENST00000514660 AMHP03971 560 aa12.52□□□□□ -0.41
NEDD9-215ENST00000514660 ICAM1P05362 532 aa12.52□□□□□ -0.41
NEDD9-215ENST00000514660 DNAJB1P25685 340 aa12.52□□□□□ -0.41
NEDD9-215ENST00000514660 CALML3P27482 149 aa12.52□□□□□ -0.41
NEDD9-215ENST00000514660 SLC16A2P36021 539 aa12.52□□□□□ -0.41
NEDD9-215ENST00000514660 SLC1A4P43007 532 aa12.52□□□□□ -0.41
NEDD9-215ENST00000514660 ID4P47928 161 aa12.52□□□□□ -0.41
NEDD9-215ENST00000514660 RRP1P56182 461 aaKnown RBP12.52□□□□□ -0.41
NEDD9-215ENST00000514660 SIGLEC14Q08ET2 396 aa12.52□□□□□ -0.41
NEDD9-215ENST00000514660 PKN1Q16512 942 aa12.52□□□□□ -0.41
NEDD9-215ENST00000514660 LY6KQ17RY6 165 aa12.52□□□□□ -0.41
NEDD9-215ENST00000514660 PLEKHG4Q58EX7 1191 aa12.52□□□□□ -0.41
NEDD9-215ENST00000514660 RCSD1Q6JBY9 416 aa12.52□□□□□ -0.41
NEDD9-215ENST00000514660 SCFD2Q8WU76 684 aa12.52□□□□□ -0.41
NEDD9-215ENST00000514660 CHURC1Q8WUH1 139 aa12.52□□□□□ -0.41
NEDD9-215ENST00000514660 OSBP2Q969R2 916 aa12.52□□□□□ -0.41
NEDD9-215ENST00000514660 HAUS7Q99871 368 aa12.52□□□□□ -0.41
NEDD9-215ENST00000514660 ALG1Q9BT22 464 aa12.52□□□□□ -0.41
NEDD9-215ENST00000514660 RANBP17Q9H2T7 1088 aaKnown RBP12.52□□□□□ -0.41
NEDD9-215ENST00000514660 INCENPQ9NQS7 918 aa12.52□□□□□ -0.41
NEDD9-215ENST00000514660 IL17RBQ9NRM6 502 aa12.52□□□□□ -0.41
NEDD9-215ENST00000514660 ISY1Q9ULR0 285 aaKnown RBP12.52□□□□□ -0.41
NEDD9-215ENST00000514660 KIAA1671Q9BY89 1806 aa12.52□□□□□ -0.41
NEDD9-215ENST00000514660 MYO10Q9HD67 2058 aa12.52□□□□□ -0.41
NEDD9-215ENST00000514660 KMT2BQ9UMN6 2715 aaPredicted RBP12.51□□□□□ -0.41
NEDD9-215ENST00000514660 PTPDC1A2A3K4 754 aa12.51□□□□□ -0.41
NEDD9-215ENST00000514660 C5orf67F2Z3F1 127 aa12.51□□□□□ -0.41
NEDD9-215ENST00000514660 PARNO95453 639 aaKnown RBP12.51□□□□□ -0.41
NEDD9-215ENST00000514660 GLP2RO95838 553 aa12.51□□□□□ -0.41
NEDD9-215ENST00000514660 NBL1P41271 181 aa12.51□□□□□ -0.41
NEDD9-215ENST00000514660 RBM10P98175 930 aaKnown RBP12.51□□□□□ -0.41
NEDD9-215ENST00000514660 IKQ13123 557 aaPredicted RBP12.51□□□□□ -0.41
NEDD9-215ENST00000514660 PTK7Q13308 1070 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms