RNA–Protein interactions for RNA: ENST00000514267.1

CALCOCO2-223, Transcript of calcium binding and coiled-coil domain 2, human

TSL 2

Gene CALCOCO2, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-223	ENST00000514267	LONRF2	Q1L5Z9	754 aa		4.86	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	ZC3H12B	Q5HYM0	836 aa	Known RBP	4.86	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	WWC2	Q6AWC2	1192 aa		4.86	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	FAM129C	Q86XR2	697 aa		4.86	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	RIOX2	Q8IUF8	465 aa		4.86	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	IGDCC3	Q8IVU1	814 aa		4.86	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	LINC01356	Q8N9X3	169 aa		4.86	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	ALG3	Q92685	438 aa		4.86	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	GPATCH3	Q96I76	525 aa		4.86	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	MRGPRX3	Q96LB0	322 aa		4.86	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	FEZ1	Q99689	392 aa		4.86	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	PARD6A	Q9NPB6	346 aa		4.86	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	MEFV	O15553	781 aa	Predicted RBP	4.85	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	SUSD5	O60279	629 aa		4.85	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	VAMP4	O75379	141 aa		4.85	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	MSL3P1	P0C860	447 aa		4.85	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	IGFBP6	P24592	240 aa	Predicted RBP	4.85	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	TACR1	P25103	407 aa		4.85	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	PRR5	P85299	388 aa		4.85	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	SV2C	Q496J9	727 aa		4.85	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	C6orf15	Q6UXA7	325 aa	Predicted RBP	4.85	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	B3GNT8	Q7Z7M8	397 aa		4.85	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	ZC3H18	Q86VM9	953 aa	Known RBP	4.85	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	ZNF513	Q8N8E2	541 aa	Predicted RBP	4.85	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	MICAL1	Q8TDZ2	1067 aa		4.85	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	SEC14L1	Q92503	715 aa		4.85	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	SGSM3	Q96HU1	749 aa		4.85	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	PWWP2A	Q96N64	755 aa		4.85	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	IFT57	Q9NWB7	429 aa		4.85	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	APEX2	Q9UBZ4	518 aa		4.85	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	COA3	Q9Y2R0	106 aa	Predicted RBP	4.85	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	TIMM13	Q9Y5L4	95 aa	Predicted RBP	4.85	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	ARID1B	Q8NFD5	2236 aa	Predicted RBP	4.85	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	ESYT3	A0FGR9	886 aa		4.84	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	C7orf72	A4D263	438 aa		4.84	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	MAFK	O60675	156 aa		4.84	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	SNRPB2	P08579	225 aa	Known RBP	4.84	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	INHBB	P09529	407 aa		4.84	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	PLS3	P13797	630 aa		4.84	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	TCEA2	Q15560	299 aa		4.84	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	LILRA6	Q6PI73	481 aa		4.84	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	FILIP1	Q7Z7B0	1213 aa		4.84	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	MARCH10	Q8NA82	808 aa	Predicted RBP	4.84	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	ZSWIM2	Q8NEG5	633 aa		4.84	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	DIO2	Q92813	273 aa		4.84	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	MTA3	Q9BTC8	594 aa		4.84	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	MCMBP	Q9BTE3	642 aa		4.84	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	METTL14	Q9HCE5	456 aa	Known RBP	4.84	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	CLEC1B	Q9P126	229 aa		4.84	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	NUB1	Q9Y5A7	615 aa		4.84	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	COL4A3BP	Q9Y5P4	624 aa		4.84	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	CCDC163	A0A0D9SF12	145 aa		4.83	□□□□□ -1.64
CALCOCO2-223	ENST00000514267		H7BY64	318 aa		4.83	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	THBD	P07204	575 aa		4.83	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	BMP7	P18075	431 aa		4.83	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	FBLN1	P23142	703 aa		4.83	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	LTBR	P36941	435 aa		4.83	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	CTSW	P56202	376 aa		4.83	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	SSRP1	Q08945	709 aa	Known RBP	4.83	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	MAP4K2	Q12851	820 aa		4.83	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	SQSTM1	Q13501	440 aa		4.83	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	KIR3DS1	Q14943	382 aa		4.83	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	ZNF227	Q86WZ6	799 aa		4.83	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	TMEFF1	Q8IYR6	380 aa		4.83	□□□□□ -1.64
CALCOCO2-223	ENST00000514267		Q8N1Y9	231 aa		4.83	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	NPLOC4	Q8TAT6	608 aa		4.83	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	KCTD13	Q8WZ19	329 aa		4.83	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	DDX11	Q96FC9	970 aa		4.83	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	KCNC2	Q96PR1	638 aa		4.83	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	KANSL2	Q9H9L4	492 aa		4.83	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	PCDH12	Q9NPG4	1184 aa		4.83	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	RTEL1	Q9NZ71	1219 aa		4.83	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	PLAA	Q9Y263	795 aa		4.83	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	RWDD3	Q9Y3V2	267 aa		4.83	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	PMF1-BGLAP	U3KQ54	211 aa		4.83	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	KDM2B	Q8NHM5	1336 aa		4.82	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	ZC3H12D	A2A288	527 aa	Known RBP	4.82	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	CYP7B1	O75881	506 aa		4.82	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	ITGAV	P06756	1048 aa		4.82	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	GYS2	P54840	703 aa		4.82	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	FOXO4	P98177	505 aa		4.82	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	CACNB2	Q08289	660 aa	Predicted RBP	4.82	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	LCE1D	Q5T752	114 aa		4.82	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	RSPO2	Q6UXX9	243 aa	Predicted RBP	4.82	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	ETV3L	Q6ZN32	361 aa		4.82	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	CPNE8	Q86YQ8	564 aa		4.82	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	LRRC47	Q8N1G4	583 aa	Known RBP	4.82	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	WRNIP1	Q96S55	665 aa		4.82	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	GULP1	Q9UBP9	304 aa		4.82	□□□□□ -1.64
CALCOCO2-223	ENST00000514267		X6R8D5	127 aa		4.82	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	SH3D21	A4FU49	640 aa		4.81	□□□□□ -1.64
CALCOCO2-223	ENST00000514267		B2RBV5	119 aa		4.81	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	DIAPH1	O60610	1272 aa	Known RBP	4.81	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	FUCA1	P04066	466 aa		4.81	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	ASGR2	P07307	311 aa		4.81	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	VIL1	P09327	827 aa	Known RBP	4.81	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	CYP2C8	P10632	490 aa		4.81	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	KCNJ6	P48051	423 aa		4.81	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	GFRA1	P56159	465 aa		4.81	□□□□□ -1.64
CALCOCO2-223	ENST00000514267	HSP90AA2P	Q14568	343 aa	Predicted RBP	4.81	□□□□□ -1.64

Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms