RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 SEC31BQ9NQW1 1179 aa12.28□□□□□ -0.44
TCOF1-211ENST00000513346 USP31Q70CQ4 1352 aa12.28□□□□□ -0.44
TCOF1-211ENST00000513346 MED23Q9ULK4 1368 aa12.28□□□□□ -0.44
TCOF1-211ENST00000513346 SKIP12755 728 aa12.28□□□□□ -0.44
TCOF1-211ENST00000513346 PTPROQ16827 1216 aa12.28□□□□□ -0.44
TCOF1-211ENST00000513346 SUGP1Q8IWZ8 645 aaKnown RBP12.28□□□□□ -0.44
TCOF1-211ENST00000513346 RUBCNQ92622 972 aa12.28□□□□□ -0.44
TCOF1-211ENST00000513346 GJB4Q9NTQ9 266 aa12.28□□□□□ -0.44
TCOF1-211ENST00000513346 ZNF446Q9NWS9 450 aa12.28□□□□□ -0.44
TCOF1-211ENST00000513346 OPHN1O60890 802 aa12.28□□□□□ -0.44
TCOF1-211ENST00000513346 ADRA2BP18089 450 aa12.28□□□□□ -0.44
TCOF1-211ENST00000513346 KIF11P52732 1056 aa12.28□□□□□ -0.44
TCOF1-211ENST00000513346 GUCY1A3Q02108 690 aa12.28□□□□□ -0.44
TCOF1-211ENST00000513346 HERC4Q5GLZ8 1057 aaPredicted RBP12.28□□□□□ -0.44
TCOF1-211ENST00000513346 KRT25Q7Z3Z0 450 aa12.28□□□□□ -0.44
TCOF1-211ENST00000513346 PACS2Q86VP3 889 aa12.28□□□□□ -0.44
TCOF1-211ENST00000513346 ZNF473Q8WTR7 871 aaKnown RBP12.28□□□□□ -0.44
TCOF1-211ENST00000513346 U2AF1L4Q8WU68 220 aaKnown RBP12.28□□□□□ -0.44
TCOF1-211ENST00000513346 PBKQ96KB5 322 aa12.28□□□□□ -0.44
TCOF1-211ENST00000513346 CCT8L2Q96SF2 557 aa12.28□□□□□ -0.44
TCOF1-211ENST00000513346 ELAC2Q9BQ52 826 aaKnown RBP12.28□□□□□ -0.44
TCOF1-211ENST00000513346 TXLNGQ9NUQ3 528 aa12.28□□□□□ -0.44
TCOF1-211ENST00000513346 CDC42BPGQ6DT37 1551 aa12.28□□□□□ -0.44
TCOF1-211ENST00000513346 CHMP2AO43633 222 aa12.28□□□□□ -0.44
TCOF1-211ENST00000513346 KIAA0825Q8IV33 1275 aa12.28□□□□□ -0.44
TCOF1-211ENST00000513346 SREK1Q8WXA9 508 aaKnown RBP12.28□□□□□ -0.44
TCOF1-211ENST00000513346 DAAM1Q9Y4D1 1078 aa12.28□□□□□ -0.44
TCOF1-211ENST00000513346 FTCDO95954 541 aa12.27□□□□□ -0.44
TCOF1-211ENST00000513346 GAS8O95995 478 aa12.27□□□□□ -0.44
TCOF1-211ENST00000513346 ATP1A1P05023 1023 aaKnown RBP12.27□□□□□ -0.44
TCOF1-211ENST00000513346 ADCY7P51828 1080 aa12.27□□□□□ -0.44
TCOF1-211ENST00000513346 UBE3CQ15386 1083 aa12.27□□□□□ -0.44
TCOF1-211ENST00000513346 P2RX5Q93086 422 aa12.27□□□□□ -0.44
TCOF1-211ENST00000513346 MRRFQ96E11 262 aaKnown RBP12.27□□□□□ -0.44
TCOF1-211ENST00000513346 MMS19Q96T76 1030 aa12.27□□□□□ -0.44
TCOF1-211ENST00000513346 LCMT1Q9UIC8 334 aa12.27□□□□□ -0.44
TCOF1-211ENST00000513346 PALLDQ8WX93 1383 aa12.27□□□□□ -0.44
TCOF1-211ENST00000513346 CFAP73A6NFT4 308 aa12.27□□□□□ -0.45
TCOF1-211ENST00000513346 ZRANB2O95218 330 aaKnown RBP eCLIP12.27□□□□□ -0.45
TCOF1-211ENST00000513346 SERPINB2P05120 415 aa12.27□□□□□ -0.45
TCOF1-211ENST00000513346 IFNAR1P17181 557 aa12.27□□□□□ -0.45
TCOF1-211ENST00000513346 DOK7Q18PE1 504 aa12.27□□□□□ -0.45
TCOF1-211ENST00000513346 HAUS3Q68CZ6 603 aa12.27□□□□□ -0.45
TCOF1-211ENST00000513346 CCDC13Q8IYE1 715 aa12.27□□□□□ -0.45
TCOF1-211ENST00000513346 MSANTD4Q8NCY6 345 aa12.27□□□□□ -0.45
TCOF1-211ENST00000513346 DDX27Q96GQ7 796 aaKnown RBP12.27□□□□□ -0.45
TCOF1-211ENST00000513346 SUDS3Q9H7L9 328 aaPredicted RBP12.27□□□□□ -0.45
TCOF1-211ENST00000513346 PCDHB6Q9Y5E3 794 aa12.27□□□□□ -0.45
TCOF1-211ENST00000513346 ZNF804BA4D1E1 1349 aa12.27□□□□□ -0.45
TCOF1-211ENST00000513346 NEXMIFQ5QGS0 1516 aa12.27□□□□□ -0.45
TCOF1-211ENST00000513346 MYO1FO00160 1098 aa12.27□□□□□ -0.45
TCOF1-211ENST00000513346 CALUO43852 315 aaPredicted RBP12.27□□□□□ -0.45
TCOF1-211ENST00000513346 NOL3O60936 208 aaKnown RBP12.27□□□□□ -0.45
TCOF1-211ENST00000513346 NR5A1Q13285 461 aa12.27□□□□□ -0.45
TCOF1-211ENST00000513346 NSMFQ6X4W1 530 aa12.27□□□□□ -0.45
TCOF1-211ENST00000513346 ZNF579Q8NAF0 562 aaKnown RBP12.27□□□□□ -0.45
TCOF1-211ENST00000513346 ENGASEQ8NFI3 743 aa12.27□□□□□ -0.45
TCOF1-211ENST00000513346 SNX29Q8TEQ0 813 aa12.27□□□□□ -0.45
TCOF1-211ENST00000513346 IQSEC2Q5JU85 1478 aa12.27□□□□□ -0.45
TCOF1-211ENST00000513346 MDH1P40925 334 aaKnown RBP12.26□□□□□ -0.45
TCOF1-211ENST00000513346 PPP2R2AP63151 447 aa12.26□□□□□ -0.45
TCOF1-211ENST00000513346 DBN1Q16643 649 aa12.26□□□□□ -0.45
TCOF1-211ENST00000513346 NELFCDQ8IXH7 590 aa12.26□□□□□ -0.45
TCOF1-211ENST00000513346 THOC1Q96FV9 657 aaKnown RBP12.26□□□□□ -0.45
TCOF1-211ENST00000513346 PNKPQ96T60 521 aa12.26□□□□□ -0.45
TCOF1-211ENST00000513346 GPHNQ9NQX3 736 aaPredicted RBP12.26□□□□□ -0.45
TCOF1-211ENST00000513346 ZBTB12Q9Y330 459 aaPredicted RBP12.26□□□□□ -0.45
TCOF1-211ENST00000513346 CLTCQ00610 1675 aaKnown RBP12.26□□□□□ -0.45
TCOF1-211ENST00000513346 MYOCDQ8IZQ8 938 aa12.26□□□□□ -0.45
TCOF1-211ENST00000513346 TUBE1Q9UJT0 475 aa12.26□□□□□ -0.45
TCOF1-211ENST00000513346 H7C1W4 665 aa12.26□□□□□ -0.45
TCOF1-211ENST00000513346 TULP2O00295 520 aa12.26□□□□□ -0.45
TCOF1-211ENST00000513346 STAT1P42224 750 aa12.26□□□□□ -0.45
TCOF1-211ENST00000513346 IL9RQ01113 521 aa12.26□□□□□ -0.45
TCOF1-211ENST00000513346 UAP1Q16222 522 aaPredicted RBP12.26□□□□□ -0.45
TCOF1-211ENST00000513346 SHC4Q6S5L8 630 aa12.26□□□□□ -0.45
TCOF1-211ENST00000513346 RSRC2Q7L4I2 434 aaKnown RBP12.26□□□□□ -0.45
TCOF1-211ENST00000513346 NOA1Q8NC60 698 aaKnown RBP12.26□□□□□ -0.45
TCOF1-211ENST00000513346 NEK9Q8TD19 979 aa12.26□□□□□ -0.45
TCOF1-211ENST00000513346 OSBP2Q969R2 916 aa12.26□□□□□ -0.45
TCOF1-211ENST00000513346 EPSTI1Q96J88 318 aa12.26□□□□□ -0.45
TCOF1-211ENST00000513346 MAGEF1Q9HAY2 307 aa12.26□□□□□ -0.45
TCOF1-211ENST00000513346 FRMD4BQ9Y2L6 1034 aa12.26□□□□□ -0.45
TCOF1-211ENST00000513346 A0A1B0GTH6 734 aa12.26□□□□□ -0.45
TCOF1-211ENST00000513346 CFBP00751 764 aa12.26□□□□□ -0.45
TCOF1-211ENST00000513346 TRAPPC10P48553 1259 aa12.26□□□□□ -0.45
TCOF1-211ENST00000513346 SCNN1DP51172 638 aa12.26□□□□□ -0.45
TCOF1-211ENST00000513346 USH1GQ495M9 461 aa12.26□□□□□ -0.45
TCOF1-211ENST00000513346 NAA35Q5VZE5 725 aa12.26□□□□□ -0.45
TCOF1-211ENST00000513346 RAD9BQ6WBX8 426 aa12.26□□□□□ -0.45
TCOF1-211ENST00000513346 BLIDQ8IZY5 108 aa12.26□□□□□ -0.45
TCOF1-211ENST00000513346 FBXO41Q8TF61 875 aa12.26□□□□□ -0.45
TCOF1-211ENST00000513346 RNF26Q9BY78 433 aaPredicted RBP12.26□□□□□ -0.45
TCOF1-211ENST00000513346 IVNS1ABPQ9Y6Y0 642 aa12.26□□□□□ -0.45
TCOF1-211ENST00000513346 ATP10DQ9P241 1426 aa12.26□□□□□ -0.45
TCOF1-211ENST00000513346 TNKSO95271 1327 aa12.26□□□□□ -0.45
TCOF1-211ENST00000513346 LGALS16A8MUM7 142 aa12.25□□□□□ -0.45
TCOF1-211ENST00000513346 M0R2C6 588 aa12.25□□□□□ -0.45
TCOF1-211ENST00000513346 RPS6KA4O75676 772 aa12.25□□□□□ -0.45
TCOF1-211ENST00000513346 MMEP08473 750 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms