RNA–Protein interactions for RNA: ENST00000512881.5

RFC1-215, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-215ENST00000512881 ZMYM1Q5SVZ6 1142 aa8.41□□□□□ -1.06
RFC1-215ENST00000512881 C17orf99Q6UX52 265 aa8.41□□□□□ -1.06
RFC1-215ENST00000512881 SCYL3Q8IZE3 742 aa8.41□□□□□ -1.06
RFC1-215ENST00000512881 TP53INP1Q96A56 240 aa8.41□□□□□ -1.06
RFC1-215ENST00000512881 ARMC5Q96C12 935 aa8.41□□□□□ -1.06
RFC1-215ENST00000512881 DBNDD2Q9BQY9 259 aa8.41□□□□□ -1.06
RFC1-215ENST00000512881 RASSF4Q9H2L5 321 aa8.41□□□□□ -1.06
RFC1-215ENST00000512881 PICK1Q9NRD5 415 aa8.41□□□□□ -1.06
RFC1-215ENST00000512881 LRP2BPQ9P2M1 347 aa8.41□□□□□ -1.06
RFC1-215ENST00000512881 KANSL3Q9P2N6 904 aa8.41□□□□□ -1.06
RFC1-215ENST00000512881 NOP58Q9Y2X3 529 aaKnown RBP8.41□□□□□ -1.06
RFC1-215ENST00000512881 ZHX2Q9Y6X8 837 aa8.41□□□□□ -1.06
RFC1-215ENST00000512881 RFX7Q2KHR2 1363 aa8.4□□□□□ -1.06
RFC1-215ENST00000512881 ZBED9Q6R2W3 1325 aa8.4□□□□□ -1.06
RFC1-215ENST00000512881 CTNND1O60716 968 aaKnown RBP8.4□□□□□ -1.06
RFC1-215ENST00000512881 EIF1AXP47813 144 aaKnown RBP8.4□□□□□ -1.06
RFC1-215ENST00000512881 LACTBP83111 547 aaPredicted RBP8.4□□□□□ -1.06
RFC1-215ENST00000512881 KIF22Q14807 665 aa8.4□□□□□ -1.06
RFC1-215ENST00000512881 ZNF438Q7Z4V0 828 aa8.4□□□□□ -1.06
RFC1-215ENST00000512881 MAP4K3Q8IVH8 894 aa8.4□□□□□ -1.06
RFC1-215ENST00000512881 CACTIN-AS1Q8N1I8 211 aa8.4□□□□□ -1.06
RFC1-215ENST00000512881 CEP120Q8N960 986 aa8.4□□□□□ -1.06
RFC1-215ENST00000512881 PANK1Q8TE04 598 aa8.4□□□□□ -1.06
RFC1-215ENST00000512881 ARHGAP39Q9C0H5 1083 aa8.4□□□□□ -1.06
RFC1-215ENST00000512881 CNTN3Q9P232 1028 aa8.4□□□□□ -1.06
RFC1-215ENST00000512881 CPA4Q9UI42 421 aa8.4□□□□□ -1.06
RFC1-215ENST00000512881 AFG3L2Q9Y4W6 797 aa8.4□□□□□ -1.06
RFC1-215ENST00000512881 MKI67P46013 3256 aaKnown RBP8.39□□□□□ -1.07
RFC1-215ENST00000512881 A0A0G2JLL6 359 aaPredicted RBP8.39□□□□□ -1.07
RFC1-215ENST00000512881 A6NHS1 94 aa8.39□□□□□ -1.07
RFC1-215ENST00000512881 TM4SF5O14894 197 aa8.39□□□□□ -1.07
RFC1-215ENST00000512881 BAG3O95817 575 aa8.39□□□□□ -1.07
RFC1-215ENST00000512881 DNM1Q05193 864 aaKnown RBP8.39□□□□□ -1.07
RFC1-215ENST00000512881 CEP135Q66GS9 1140 aa8.39□□□□□ -1.07
RFC1-215ENST00000512881 NAA16Q6N069 864 aaPredicted RBP8.39□□□□□ -1.07
RFC1-215ENST00000512881 CEP85Q6P2H3 762 aa8.39□□□□□ -1.07
RFC1-215ENST00000512881 FASTKD5Q7L8L6 764 aaKnown RBP8.39□□□□□ -1.07
RFC1-215ENST00000512881 PRRT2Q7Z6L0 340 aaPredicted RBP8.39□□□□□ -1.07
RFC1-215ENST00000512881 NBPF11Q86T75 865 aa8.39□□□□□ -1.07
RFC1-215ENST00000512881 TEX11Q8IYF3 940 aa8.39□□□□□ -1.07
RFC1-215ENST00000512881 SH3RF3Q8TEJ3 882 aaPredicted RBP8.39□□□□□ -1.07
RFC1-215ENST00000512881 EAF2Q96CJ1 260 aaPredicted RBP8.39□□□□□ -1.07
RFC1-215ENST00000512881 ZNF512BQ96KM6 892 aaPredicted RBP8.39□□□□□ -1.07
RFC1-215ENST00000512881 SPACA7Q96KW9 195 aa8.39□□□□□ -1.07
RFC1-215ENST00000512881 NOL10Q9BSC4 688 aaKnown RBP8.39□□□□□ -1.07
RFC1-215ENST00000512881 LACRTQ9GZZ8 138 aa8.39□□□□□ -1.07
RFC1-215ENST00000512881 MRPL18Q9H0U6 180 aaKnown RBP8.39□□□□□ -1.07
RFC1-215ENST00000512881 CCDC8Q9H0W5 538 aaPredicted RBP8.39□□□□□ -1.07
RFC1-215ENST00000512881 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.39□□□□□ -1.07
RFC1-215ENST00000512881 DBNLQ9UJU6 430 aaKnown RBP8.39□□□□□ -1.07
RFC1-215ENST00000512881 PPME1Q9Y570 386 aa8.39□□□□□ -1.07
RFC1-215ENST00000512881 PTCH2Q9Y6C5 1203 aa8.39□□□□□ -1.07
RFC1-215ENST00000512881 ECM29Q5VYK3 1845 aa8.38□□□□□ -1.07
RFC1-215ENST00000512881 ARAP2Q8WZ64 1704 aa8.38□□□□□ -1.07
RFC1-215ENST00000512881 SMNDC1O75940 238 aaKnown RBP eCLIP8.38□□□□□ -1.07
RFC1-215ENST00000512881 CYP2C8P10632 490 aa8.38□□□□□ -1.07
RFC1-215ENST00000512881 NPR3P17342 541 aa8.38□□□□□ -1.07
RFC1-215ENST00000512881 EN2P19622 333 aaPredicted RBP8.38□□□□□ -1.07
RFC1-215ENST00000512881 MZF1P28698 734 aaPredicted RBP8.38□□□□□ -1.07
RFC1-215ENST00000512881 PSMC4P43686 418 aa8.38□□□□□ -1.07
RFC1-215ENST00000512881 SLC9C1Q4G0N8 1177 aa8.38□□□□□ -1.07
RFC1-215ENST00000512881 XKR5Q6UX68 686 aa8.38□□□□□ -1.07
RFC1-215ENST00000512881 GADL1Q6ZQY3 521 aa8.38□□□□□ -1.07
RFC1-215ENST00000512881 GALNT11Q8NCW6 608 aa8.38□□□□□ -1.07
RFC1-215ENST00000512881 ZNF333Q96JL9 665 aa8.38□□□□□ -1.07
RFC1-215ENST00000512881 PARK7Q99497 189 aaKnown RBP8.38□□□□□ -1.07
RFC1-215ENST00000512881 PBX4Q9BYU1 374 aa8.38□□□□□ -1.07
RFC1-215ENST00000512881 OSBPL5Q9H0X9 879 aaPredicted RBP8.38□□□□□ -1.07
RFC1-215ENST00000512881 MUC3BQ9H195 1237 aa8.38□□□□□ -1.07
RFC1-215ENST00000512881 CHRDQ9H2X0 955 aa8.38□□□□□ -1.07
RFC1-215ENST00000512881 PIH1D3Q9NQM4 214 aaKnown RBP8.38□□□□□ -1.07
RFC1-215ENST00000512881 AATFQ9NY61 560 aaKnown RBP eCLIP8.38□□□□□ -1.07
RFC1-215ENST00000512881 ADGRA2Q96PE1 1338 aa8.37□□□□□ -1.07
RFC1-215ENST00000512881 TRIM75PA6NK02 468 aa8.37□□□□□ -1.07
RFC1-215ENST00000512881 F8W735 103 aaPredicted RBP8.37□□□□□ -1.07
RFC1-215ENST00000512881 IGSF3O75054 1194 aa8.37□□□□□ -1.07
RFC1-215ENST00000512881 RPLP1P05386 114 aaKnown RBP8.37□□□□□ -1.07
RFC1-215ENST00000512881 ACPPP15309 386 aa8.37□□□□□ -1.07
RFC1-215ENST00000512881 HOXD10P28358 340 aa8.37□□□□□ -1.07
RFC1-215ENST00000512881 CTGFP29279 349 aa8.37□□□□□ -1.07
RFC1-215ENST00000512881 PRMT2P55345 433 aa8.37□□□□□ -1.07
RFC1-215ENST00000512881 RRP1BQ14684 758 aaKnown RBP8.37□□□□□ -1.07
RFC1-215ENST00000512881 TXNDC11Q6PKC3 985 aa8.37□□□□□ -1.07
RFC1-215ENST00000512881 Q6ZS46 218 aa8.37□□□□□ -1.07
RFC1-215ENST00000512881 ADGRA1Q86SQ6 560 aa8.37□□□□□ -1.07
RFC1-215ENST00000512881 CCDC84Q86UT8 332 aaPredicted RBP8.37□□□□□ -1.07
RFC1-215ENST00000512881 NCAPG2Q86XI2 1143 aa8.37□□□□□ -1.07
RFC1-215ENST00000512881 ERC1Q8IUD2 1116 aa8.37□□□□□ -1.07
RFC1-215ENST00000512881 C1orf127Q8N9H9 656 aa8.37□□□□□ -1.07
RFC1-215ENST00000512881 SH3TC2Q8TF17 1288 aa8.37□□□□□ -1.07
RFC1-215ENST00000512881 TGFBRAP1Q8WUH2 860 aa8.37□□□□□ -1.07
RFC1-215ENST00000512881 DHX36Q9H2U1 1008 aaKnown RBP8.37□□□□□ -1.07
RFC1-215ENST00000512881 AKTIPQ9H8T0 292 aa8.37□□□□□ -1.07
RFC1-215ENST00000512881 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.37□□□□□ -1.07
RFC1-215ENST00000512881 PI4KBQ9UBF8 816 aa8.37□□□□□ -1.07
RFC1-215ENST00000512881 SRRDQ9UH36 339 aa8.37□□□□□ -1.07
RFC1-215ENST00000512881 SALL4Q9UJQ4 1053 aa8.37□□□□□ -1.07
RFC1-215ENST00000512881 EXOC6BQ9Y2D4 811 aa8.37□□□□□ -1.07
RFC1-215ENST00000512881 SLC45A1Q9Y2W3 748 aa8.37□□□□□ -1.07
RFC1-215ENST00000512881 BRCA2P51587 3418 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms