RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 STAT5AP42229 794 aa3.84□□□□□ -1.79
PDGFC-208ENST00000512711 FRMD5Q7Z6J6 570 aa3.84□□□□□ -1.79
PDGFC-208ENST00000512711 MILR1Q7Z6M3 343 aa3.84□□□□□ -1.79
PDGFC-208ENST00000512711 VPS37DQ86XT2 251 aa3.84□□□□□ -1.79
PDGFC-208ENST00000512711 MCF2L2Q86YR7 1114 aa3.84□□□□□ -1.79
PDGFC-208ENST00000512711 SP8Q8IXZ3 490 aa3.84□□□□□ -1.79
PDGFC-208ENST00000512711 CARFQ8N187 725 aa3.84□□□□□ -1.79
PDGFC-208ENST00000512711 CELF2-AS1Q8N7Q2 184 aa3.84□□□□□ -1.79
PDGFC-208ENST00000512711 LINC00482Q8N8I6 264 aa3.84□□□□□ -1.79
PDGFC-208ENST00000512711 TMEM145Q8NBT3 493 aa3.84□□□□□ -1.79
PDGFC-208ENST00000512711 LRP2BPQ9P2M1 347 aa3.84□□□□□ -1.79
PDGFC-208ENST00000512711 PRKAG3Q9UGI9 489 aa3.84□□□□□ -1.79
PDGFC-208ENST00000512711 NUDT5Q9UKK9 219 aa3.84□□□□□ -1.79
PDGFC-208ENST00000512711 PALD1Q9ULE6 856 aa3.84□□□□□ -1.79
PDGFC-208ENST00000512711 TIMM13Q9Y5L4 95 aaPredicted RBP3.84□□□□□ -1.79
PDGFC-208ENST00000512711 SCG5P05408 212 aa3.83□□□□□ -1.8
PDGFC-208ENST00000512711 FGRP09769 529 aa3.83□□□□□ -1.8
PDGFC-208ENST00000512711 KCNJ6P48051 423 aa3.83□□□□□ -1.8
PDGFC-208ENST00000512711 NFKB2Q00653 900 aa3.83□□□□□ -1.8
PDGFC-208ENST00000512711 CD300LDQ6UXZ3 194 aa3.83□□□□□ -1.8
PDGFC-208ENST00000512711 PRRT2Q7Z6L0 340 aaPredicted RBP3.83□□□□□ -1.8
PDGFC-208ENST00000512711 DIO2Q92813 273 aa3.83□□□□□ -1.8
PDGFC-208ENST00000512711 TRMT2BQ96GJ1 504 aaKnown RBP3.83□□□□□ -1.8
PDGFC-208ENST00000512711 C1orf159Q96HA4 380 aa3.83□□□□□ -1.8
PDGFC-208ENST00000512711 TEPSINQ96N21 525 aa3.83□□□□□ -1.8
PDGFC-208ENST00000512711 BUD13Q9BRD0 619 aaKnown RBP eCLIP3.83□□□□□ -1.8
PDGFC-208ENST00000512711 TINF2Q9BSI4 451 aa3.83□□□□□ -1.8
PDGFC-208ENST00000512711 C11orf84Q9BUA3 381 aaPredicted RBP3.83□□□□□ -1.8
PDGFC-208ENST00000512711 CDIP1Q9H305 208 aa3.83□□□□□ -1.8
PDGFC-208ENST00000512711 WASF3Q9UPY6 502 aa3.83□□□□□ -1.8
PDGFC-208ENST00000512711 PCDHA2Q9Y5H9 948 aa3.83□□□□□ -1.8
PDGFC-208ENST00000512711 X6R8D5 127 aa3.83□□□□□ -1.8
PDGFC-208ENST00000512711 A0A1W2PQU0 124 aa3.82□□□□□ -1.8
PDGFC-208ENST00000512711 CELA3BP08861 270 aa3.82□□□□□ -1.8
PDGFC-208ENST00000512711 TCF3P15923 654 aa3.82□□□□□ -1.8
PDGFC-208ENST00000512711 SARSP49591 514 aaKnown RBP3.82□□□□□ -1.8
PDGFC-208ENST00000512711 GFRA1P56159 465 aa3.82□□□□□ -1.8
PDGFC-208ENST00000512711 PLP2Q04941 152 aa3.82□□□□□ -1.8
PDGFC-208ENST00000512711 FXNQ16595 210 aa3.82□□□□□ -1.8
PDGFC-208ENST00000512711 CR1LQ2VPA4 569 aa3.82□□□□□ -1.8
PDGFC-208ENST00000512711 ZNF761Q86XN6 746 aaPredicted RBP3.82□□□□□ -1.8
PDGFC-208ENST00000512711 CRACR2BQ8N4Y2 399 aaPredicted RBP3.82□□□□□ -1.8
PDGFC-208ENST00000512711 ARRDC4Q8NCT1 418 aa3.82□□□□□ -1.8
PDGFC-208ENST00000512711 HNRNPLLQ8WVV9 542 aaKnown RBP3.82□□□□□ -1.8
PDGFC-208ENST00000512711 BDH2Q9BUT1 245 aa3.82□□□□□ -1.8
PDGFC-208ENST00000512711 MEFVO15553 781 aaPredicted RBP3.81□□□□□ -1.8
PDGFC-208ENST00000512711 DLX3O60479 287 aa3.81□□□□□ -1.8
PDGFC-208ENST00000512711 MSCO60682 206 aa3.81□□□□□ -1.8
PDGFC-208ENST00000512711 NAT2P11245 290 aa3.81□□□□□ -1.8
PDGFC-208ENST00000512711 DNAJA1P31689 397 aaKnown RBP3.81□□□□□ -1.8
PDGFC-208ENST00000512711 RPL11P62913 178 aaKnown RBP3.81□□□□□ -1.8
PDGFC-208ENST00000512711 PPP2R2AP63151 447 aa3.81□□□□□ -1.8
PDGFC-208ENST00000512711 ARID5AQ03989 594 aa3.81□□□□□ -1.8
PDGFC-208ENST00000512711 SLC10A6Q3KNW5 377 aa3.81□□□□□ -1.8
PDGFC-208ENST00000512711 TNNI3KQ59H18 835 aa3.81□□□□□ -1.8
PDGFC-208ENST00000512711 SLC35F1Q5T1Q4 408 aa3.81□□□□□ -1.8
PDGFC-208ENST00000512711 ZFYVE27Q5T4F4 411 aa3.81□□□□□ -1.8
PDGFC-208ENST00000512711 IQCEQ6IPM2 695 aa3.81□□□□□ -1.8
PDGFC-208ENST00000512711 ETV3LQ6ZN32 361 aa3.81□□□□□ -1.8
PDGFC-208ENST00000512711 MIB1Q86YT6 1006 aa3.81□□□□□ -1.8
PDGFC-208ENST00000512711 RBM12BQ8IXT5 1001 aaKnown RBP3.81□□□□□ -1.8
PDGFC-208ENST00000512711 PPIL6Q8IXY8 311 aa3.81□□□□□ -1.8
PDGFC-208ENST00000512711 Q8N1Y9 231 aa3.81□□□□□ -1.8
PDGFC-208ENST00000512711 TMEM169Q96HH4 297 aa3.81□□□□□ -1.8
PDGFC-208ENST00000512711 CCDC140Q96MF4 163 aa3.81□□□□□ -1.8
PDGFC-208ENST00000512711 JAM3Q9BX67 310 aa3.81□□□□□ -1.8
PDGFC-208ENST00000512711 USP40Q9NVE5 1235 aa3.81□□□□□ -1.8
PDGFC-208ENST00000512711 RBPJLQ9UBG7 517 aa3.81□□□□□ -1.8
PDGFC-208ENST00000512711 DDX3XO00571 662 aaKnown RBP eCLIP3.8□□□□□ -1.8
PDGFC-208ENST00000512711 KLF4O43474 513 aa3.8□□□□□ -1.8
PDGFC-208ENST00000512711 CPP00450 1065 aa3.8□□□□□ -1.8
PDGFC-208ENST00000512711 CYP2C8P10632 490 aa3.8□□□□□ -1.8
PDGFC-208ENST00000512711 CNR2P34972 360 aa3.8□□□□□ -1.8
PDGFC-208ENST00000512711 THBS2P35442 1172 aa3.8□□□□□ -1.8
PDGFC-208ENST00000512711 LTBRP36941 435 aa3.8□□□□□ -1.8
PDGFC-208ENST00000512711 ITGA1P56199 1179 aa3.8□□□□□ -1.8
PDGFC-208ENST00000512711 LSAMPQ13449 338 aa3.8□□□□□ -1.8
PDGFC-208ENST00000512711 TESK1Q15569 626 aa3.8□□□□□ -1.8
PDGFC-208ENST00000512711 PRR31Q5SQ13 230 aa3.8□□□□□ -1.8
PDGFC-208ENST00000512711 UBXN11Q5T124 520 aa3.8□□□□□ -1.8
PDGFC-208ENST00000512711 MROH9Q5TGP6 573 aa3.8□□□□□ -1.8
PDGFC-208ENST00000512711 E4F1Q66K89 784 aaPredicted RBP3.8□□□□□ -1.8
PDGFC-208ENST00000512711 MCTP2Q6DN12 878 aa3.8□□□□□ -1.8
PDGFC-208ENST00000512711 ANKS3Q6ZW76 656 aa3.8□□□□□ -1.8
PDGFC-208ENST00000512711 DCP2Q8IU60 420 aaKnown RBP3.8□□□□□ -1.8
PDGFC-208ENST00000512711 RIOX2Q8IUF8 465 aa3.8□□□□□ -1.8
PDGFC-208ENST00000512711 KYQ8NBH2 561 aa3.8□□□□□ -1.8
PDGFC-208ENST00000512711 ADAMTS17Q8TE56 1095 aa3.8□□□□□ -1.8
PDGFC-208ENST00000512711 PPIL4Q8WUA2 492 aaKnown RBP eCLIP3.8□□□□□ -1.8
PDGFC-208ENST00000512711 SEC14L1Q92503 715 aa3.8□□□□□ -1.8
PDGFC-208ENST00000512711 CHAMP1Q96JM3 812 aa3.8□□□□□ -1.8
PDGFC-208ENST00000512711 KRTAP9-8Q9BYQ0 159 aa3.8□□□□□ -1.8
PDGFC-208ENST00000512711 LNPKQ9C0E8 428 aa3.8□□□□□ -1.8
PDGFC-208ENST00000512711 AP5M1Q9H0R1 490 aa3.8□□□□□ -1.8
PDGFC-208ENST00000512711 TMPRSS5Q9H3S3 457 aa3.8□□□□□ -1.8
PDGFC-208ENST00000512711 PPARGC1AQ9UBK2 798 aaKnown RBP3.8□□□□□ -1.8
PDGFC-208ENST00000512711 NPFFR2Q9Y5X5 522 aa3.8□□□□□ -1.8
PDGFC-208ENST00000512711 TCRBV5S2A0A599 114 aa3.79□□□□□ -1.8
PDGFC-208ENST00000512711 HGSO14964 777 aaPredicted RBP3.79□□□□□ -1.8
PDGFC-208ENST00000512711 TADA3O75528 432 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms