RNA–Protein interactions for RNA: ENST00000512462.5

PRDM16-207, Transcript of PR/SET domain 16, humanhuman

TSL 1 (best)

Gene PRDM16, Length 3,723 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-207ENST00000512462 PHLDB2Q86SQ0 1253 aa13.19□□□□□ -0.3
PRDM16-207ENST00000512462 PARD6BQ9BYG5 372 aa13.19□□□□□ -0.3
PRDM16-207ENST00000512462 IL17RBQ9NRM6 502 aa13.19□□□□□ -0.3
PRDM16-207ENST00000512462 NHSL1Q5SYE7 1610 aa13.19□□□□□ -0.3
PRDM16-207ENST00000512462 FLOT1O75955 427 aa13.19□□□□□ -0.3
PRDM16-207ENST00000512462 MOCS3O95396 460 aa13.19□□□□□ -0.3
PRDM16-207ENST00000512462 EPB41P11171 864 aaKnown RBP13.19□□□□□ -0.3
PRDM16-207ENST00000512462 EHHADHQ08426 723 aa13.19□□□□□ -0.3
PRDM16-207ENST00000512462 SMC1AQ14683 1233 aaKnown RBP13.19□□□□□ -0.3
PRDM16-207ENST00000512462 FAM133AQ8N9E0 248 aa13.19□□□□□ -0.3
PRDM16-207ENST00000512462 EHMT1Q9H9B1 1298 aa13.19□□□□□ -0.3
PRDM16-207ENST00000512462 A0A0U1RQJ8 604 aa13.18□□□□□ -0.3
PRDM16-207ENST00000512462 CLGNO14967 610 aa13.18□□□□□ -0.3
PRDM16-207ENST00000512462 NDUFA10O95299 355 aa13.18□□□□□ -0.3
PRDM16-207ENST00000512462 BMP6P22004 513 aa13.18□□□□□ -0.3
PRDM16-207ENST00000512462 HPDP32754 393 aaPredicted RBP13.18□□□□□ -0.3
PRDM16-207ENST00000512462 EIF4A3P38919 411 aaKnown RBP13.18□□□□□ -0.3
PRDM16-207ENST00000512462 KIAA0753Q2KHM9 967 aa13.18□□□□□ -0.3
PRDM16-207ENST00000512462 ASPRV1Q53RT3 343 aa13.18□□□□□ -0.3
PRDM16-207ENST00000512462 AMIGO3Q86WK7 504 aa13.18□□□□□ -0.3
PRDM16-207ENST00000512462 ATRIPQ8WXE1 791 aa13.18□□□□□ -0.3
PRDM16-207ENST00000512462 MYO1AQ9UBC5 1043 aa13.18□□□□□ -0.3
PRDM16-207ENST00000512462 ADAMTS1Q9UHI8 967 aa13.18□□□□□ -0.3
PRDM16-207ENST00000512462 GSTTP1A0A1W2PQM5 241 aa13.18□□□□□ -0.3
PRDM16-207ENST00000512462 F5H6K3 240 aa13.18□□□□□ -0.3
PRDM16-207ENST00000512462 GYS1P13807 737 aa13.18□□□□□ -0.3
PRDM16-207ENST00000512462 KLRC3Q07444 240 aa13.18□□□□□ -0.3
PRDM16-207ENST00000512462 VPS72Q15906 364 aa13.18□□□□□ -0.3
PRDM16-207ENST00000512462 ASIC2Q16515 512 aa13.18□□□□□ -0.3
PRDM16-207ENST00000512462 TMED8Q6PL24 325 aaPredicted RBP13.18□□□□□ -0.3
PRDM16-207ENST00000512462 TXLNBQ8N3L3 684 aa13.18□□□□□ -0.3
PRDM16-207ENST00000512462 UHMK1Q8TAS1 419 aaKnown RBP13.18□□□□□ -0.3
PRDM16-207ENST00000512462 U2AF1L4Q8WU68 220 aaKnown RBP13.18□□□□□ -0.3
PRDM16-207ENST00000512462 ANO3Q9BYT9 981 aa13.18□□□□□ -0.3
PRDM16-207ENST00000512462 PDE11AQ9HCR9 933 aa13.18□□□□□ -0.3
PRDM16-207ENST00000512462 RGL1Q9NZL6 768 aa13.18□□□□□ -0.3
PRDM16-207ENST00000512462 CWC15Q9P013 229 aaKnown RBP13.18□□□□□ -0.3
PRDM16-207ENST00000512462 ARMCX3Q9UH62 379 aaPredicted RBP13.18□□□□□ -0.3
PRDM16-207ENST00000512462 RWDD2AQ9UIY3 292 aa13.18□□□□□ -0.3
PRDM16-207ENST00000512462 ECE2O60344 883 aa13.18□□□□□ -0.3
PRDM16-207ENST00000512462 BMP3P12645 472 aa13.18□□□□□ -0.3
PRDM16-207ENST00000512462 CCNE1P24864 410 aa13.18□□□□□ -0.3
PRDM16-207ENST00000512462 CKAP4Q07065 602 aaKnown RBP13.18□□□□□ -0.3
PRDM16-207ENST00000512462 FAM83BQ5T0W9 1011 aa13.18□□□□□ -0.3
PRDM16-207ENST00000512462 SFMBT2Q5VUG0 894 aa13.18□□□□□ -0.3
PRDM16-207ENST00000512462 ANKRD40Q6AI12 368 aa13.18□□□□□ -0.3
PRDM16-207ENST00000512462 EEPD1Q7L9B9 569 aa13.18□□□□□ -0.3
PRDM16-207ENST00000512462 NIM1KQ8IY84 436 aa13.18□□□□□ -0.3
PRDM16-207ENST00000512462 TC2NQ8N9U0 490 aa13.18□□□□□ -0.3
PRDM16-207ENST00000512462 NEDD1Q8NHV4 660 aa13.18□□□□□ -0.3
PRDM16-207ENST00000512462 JCADQ9P266 1359 aa13.17□□□□□ -0.3
PRDM16-207ENST00000512462 ANKRD65E5RJM6 399 aa13.17□□□□□ -0.3
PRDM16-207ENST00000512462 HGSO14964 777 aaPredicted RBP13.17□□□□□ -0.3
PRDM16-207ENST00000512462 C2orf54Q08AI8 447 aa13.17□□□□□ -0.3
PRDM16-207ENST00000512462 BIRC3Q13489 604 aa13.17□□□□□ -0.3
PRDM16-207ENST00000512462 COA1Q9GZY4 146 aa13.17□□□□□ -0.3
PRDM16-207ENST00000512462 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.17□□□□□ -0.3
PRDM16-207ENST00000512462 PI4KBQ9UBF8 816 aa13.17□□□□□ -0.3
PRDM16-207ENST00000512462 NUP188Q5SRE5 1749 aa13.17□□□□□ -0.3
PRDM16-207ENST00000512462 PLA2G4BP0C869 781 aa13.17□□□□□ -0.3
PRDM16-207ENST00000512462 KRT5P13647 590 aa13.17□□□□□ -0.3
PRDM16-207ENST00000512462 EIF2AK2P19525 551 aaKnown RBP13.17□□□□□ -0.3
PRDM16-207ENST00000512462 LRCH2Q5VUJ6 765 aa13.17□□□□□ -0.3
PRDM16-207ENST00000512462 C8orf74Q6P047 294 aa13.17□□□□□ -0.3
PRDM16-207ENST00000512462 RBM43Q6ZSC3 357 aaKnown RBP13.17□□□□□ -0.3
PRDM16-207ENST00000512462 DNAAF5Q86Y56 855 aa13.17□□□□□ -0.3
PRDM16-207ENST00000512462 MLXIPQ9HAP2 919 aa13.17□□□□□ -0.3
PRDM16-207ENST00000512462 LRRC4BQ9NT99 713 aa13.17□□□□□ -0.3
PRDM16-207ENST00000512462 ABHD10Q9NUJ1 306 aa13.17□□□□□ -0.3
PRDM16-207ENST00000512462 SMARCAL1Q9NZC9 954 aa13.17□□□□□ -0.3
PRDM16-207ENST00000512462 CCPG1Q9ULG6 757 aa13.17□□□□□ -0.3
PRDM16-207ENST00000512462 PACSIN2Q9UNF0 486 aaPredicted RBP13.17□□□□□ -0.3
PRDM16-207ENST00000512462 XRCC5P13010 732 aaKnown RBP13.17□□□□□ -0.3
PRDM16-207ENST00000512462 TRIM14Q14142 442 aa13.17□□□□□ -0.3
PRDM16-207ENST00000512462 SHROOM1Q2M3G4 852 aaPredicted RBP13.17□□□□□ -0.3
PRDM16-207ENST00000512462 ODR4Q5SWX8 454 aa13.17□□□□□ -0.3
PRDM16-207ENST00000512462 GPATCH4Q5T3I0 446 aaKnown RBP13.17□□□□□ -0.3
PRDM16-207ENST00000512462 FAM178BQ8IXR5 827 aa13.17□□□□□ -0.3
PRDM16-207ENST00000512462 MB21D1Q8N884 522 aa13.17□□□□□ -0.3
PRDM16-207ENST00000512462 PROCA1Q8NCQ7 364 aaPredicted RBP13.17□□□□□ -0.3
PRDM16-207ENST00000512462 TBC1D5Q92609 795 aa13.17□□□□□ -0.3
PRDM16-207ENST00000512462 NDST4Q9H3R1 872 aa13.17□□□□□ -0.3
PRDM16-207ENST00000512462 MTMR4Q9NYA4 1195 aa13.17□□□□□ -0.3
PRDM16-207ENST00000512462 HPSEQ9Y251 543 aa13.17□□□□□ -0.3
PRDM16-207ENST00000512462 FRMD4BQ9Y2L6 1034 aa13.17□□□□□ -0.3
PRDM16-207ENST00000512462 DPYDQ12882 1025 aa13.16□□□□□ -0.3
PRDM16-207ENST00000512462 ZNF579Q8NAF0 562 aaKnown RBP13.16□□□□□ -0.3
PRDM16-207ENST00000512462 NHEJ1Q9H9Q4 299 aaPredicted RBP13.16□□□□□ -0.3
PRDM16-207ENST00000512462 CDC23Q9UJX2 597 aa13.16□□□□□ -0.3
PRDM16-207ENST00000512462 ADGRG1Q9Y653 693 aa13.16□□□□□ -0.3
PRDM16-207ENST00000512462 PNMA6FA0A0J9YX94 578 aa13.16□□□□□ -0.3
PRDM16-207ENST00000512462 NCK2O43639 380 aa13.16□□□□□ -0.3
PRDM16-207ENST00000512462 CDC42EP5Q6NZY7 148 aa13.16□□□□□ -0.3
PRDM16-207ENST00000512462 STXBP4Q6ZWJ1 553 aa13.16□□□□□ -0.3
PRDM16-207ENST00000512462 MAD2L2Q9UI95 211 aa13.16□□□□□ -0.3
PRDM16-207ENST00000512462 HYOU1Q9Y4L1 999 aa13.16□□□□□ -0.3
PRDM16-207ENST00000512462 TOGARAM1Q9Y4F4 1720 aa13.16□□□□□ -0.3
PRDM16-207ENST00000512462 STXBP3O00186 592 aa13.16□□□□□ -0.3
PRDM16-207ENST00000512462 KCNK3O14649 394 aa13.16□□□□□ -0.3
PRDM16-207ENST00000512462 ADAMTS3O15072 1205 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms