RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 CNTNAP5Q8WYK1 1306 aa15.35■□□□□ 0.05
RNF4-215ENST00000511843 GOLGA8AA7E2F4 631 aa15.34■□□□□ 0.05
RNF4-215ENST00000511843 GOLGA8BA8MQT2 603 aa15.34■□□□□ 0.05
RNF4-215ENST00000511843 NKRFO15226 690 aaKnown RBP eCLIP15.34■□□□□ 0.05
RNF4-215ENST00000511843 ZBTB43O43298 467 aa15.34■□□□□ 0.05
RNF4-215ENST00000511843 EIF3JO75822 258 aaKnown RBP15.34■□□□□ 0.05
RNF4-215ENST00000511843 RAG1P15918 1043 aa15.34■□□□□ 0.05
RNF4-215ENST00000511843 SMARCA1P28370 1054 aa15.34■□□□□ 0.05
RNF4-215ENST00000511843 CPT1AP50416 773 aa15.34■□□□□ 0.05
RNF4-215ENST00000511843 CHMP4BP1P59074 171 aa15.34■□□□□ 0.05
RNF4-215ENST00000511843 FGD1P98174 961 aa15.34■□□□□ 0.05
RNF4-215ENST00000511843 ARHGAP1Q07960 439 aa15.34■□□□□ 0.05
RNF4-215ENST00000511843 TRAF1Q13077 416 aa15.34■□□□□ 0.05
RNF4-215ENST00000511843 RTN1Q16799 776 aa15.34■□□□□ 0.05
RNF4-215ENST00000511843 Q6ZUG5 572 aa15.34■□□□□ 0.05
RNF4-215ENST00000511843 AFG1LQ8WV93 481 aa15.34■□□□□ 0.05
RNF4-215ENST00000511843 BRF1Q92994 677 aa15.34■□□□□ 0.05
RNF4-215ENST00000511843 PPP1R12CQ9BZL4 782 aa15.34■□□□□ 0.05
RNF4-215ENST00000511843 TRPV6Q9H1D0 765 aa15.34■□□□□ 0.05
RNF4-215ENST00000511843 MAP3K20Q9NYL2 800 aaKnown RBP15.34■□□□□ 0.05
RNF4-215ENST00000511843 TRIP12Q14669 1992 aaPredicted RBP15.34■□□□□ 0.05
RNF4-215ENST00000511843 CABYRO75952 493 aa15.33■□□□□ 0.04
RNF4-215ENST00000511843 CD4P01730 458 aa15.33■□□□□ 0.04
RNF4-215ENST00000511843 HMGB1P09429 215 aaKnown RBP15.33■□□□□ 0.04
RNF4-215ENST00000511843 CASTP20810 708 aaKnown RBP15.33■□□□□ 0.04
RNF4-215ENST00000511843 CDC27P30260 824 aa15.33■□□□□ 0.04
RNF4-215ENST00000511843 SHHQ15465 462 aa15.33■□□□□ 0.04
RNF4-215ENST00000511843 UBE2SQ16763 222 aa15.33■□□□□ 0.04
RNF4-215ENST00000511843 ERICH6BQ5W0A0 696 aa15.33■□□□□ 0.04
RNF4-215ENST00000511843 BLOC1S2Q6QNY1 142 aa15.33■□□□□ 0.04
RNF4-215ENST00000511843 HEATR3Q7Z4Q2 680 aa15.33■□□□□ 0.04
RNF4-215ENST00000511843 VSIG10LQ86VR7 867 aa15.33■□□□□ 0.04
RNF4-215ENST00000511843 SLC43A3Q8NBI5 491 aa15.33■□□□□ 0.04
RNF4-215ENST00000511843 FAM217BQ9NTX9 383 aaPredicted RBP15.33■□□□□ 0.04
RNF4-215ENST00000511843 DDX41Q9UJV9 622 aaKnown RBP15.33■□□□□ 0.04
RNF4-215ENST00000511843 MRVI1Q9Y6F6 885 aa15.33■□□□□ 0.04
RNF4-215ENST00000511843 MROH7Q68CQ1 1323 aa15.33■□□□□ 0.04
RNF4-215ENST00000511843 A6NJR5 290 aa15.32■□□□□ 0.04
RNF4-215ENST00000511843 MEIS2O14770 477 aa15.32■□□□□ 0.04
RNF4-215ENST00000511843 TLR3O15455 904 aaKnown RBP15.32■□□□□ 0.04
RNF4-215ENST00000511843 B4GALT4O60513 344 aa15.32■□□□□ 0.04
RNF4-215ENST00000511843 GH1P01241 217 aa15.32■□□□□ 0.04
RNF4-215ENST00000511843 MMP3P08254 477 aa15.32■□□□□ 0.04
RNF4-215ENST00000511843 RPS6KB1P23443 525 aa15.32■□□□□ 0.04
RNF4-215ENST00000511843 CCND2P30279 289 aa15.32■□□□□ 0.04
RNF4-215ENST00000511843 SP2Q02086 613 aa15.32■□□□□ 0.04
RNF4-215ENST00000511843 FUT2Q10981 343 aa15.32■□□□□ 0.04
RNF4-215ENST00000511843 SAMD3Q8N6K7 520 aa15.32■□□□□ 0.04
RNF4-215ENST00000511843 SMARCC2Q8TAQ2 1214 aa15.32■□□□□ 0.04
RNF4-215ENST00000511843 MTG1Q9BT17 334 aaPredicted RBP15.32■□□□□ 0.04
RNF4-215ENST00000511843 BCAS3Q9H6U6 928 aa15.32■□□□□ 0.04
RNF4-215ENST00000511843 TRMT13Q9NUP7 481 aaKnown RBP15.32■□□□□ 0.04
RNF4-215ENST00000511843 POLR3EQ9NVU0 708 aa15.32■□□□□ 0.04
RNF4-215ENST00000511843 RTEL1Q9NZ71 1219 aa15.32■□□□□ 0.04
RNF4-215ENST00000511843 UMODL1Q5DID0 1318 aa15.32■□□□□ 0.04
RNF4-215ENST00000511843 PPFIA3O75145 1194 aa15.31■□□□□ 0.04
RNF4-215ENST00000511843 TIMP1P01033 207 aa15.31■□□□□ 0.04
RNF4-215ENST00000511843 CYP2C18P33260 490 aa15.31■□□□□ 0.04
RNF4-215ENST00000511843 MRPS9P82933 396 aaKnown RBP15.31■□□□□ 0.04
RNF4-215ENST00000511843 NBPF20Q3BBV1 942 aa15.31■□□□□ 0.04
RNF4-215ENST00000511843 FAM47CQ5HY64 1035 aa15.31■□□□□ 0.04
RNF4-215ENST00000511843 WWC2Q6AWC2 1192 aa15.31■□□□□ 0.04
RNF4-215ENST00000511843 TYW1BQ6NUM6 668 aa15.31■□□□□ 0.04
RNF4-215ENST00000511843 CUL5Q93034 780 aa15.31■□□□□ 0.04
RNF4-215ENST00000511843 USP26Q9BXU7 913 aa15.31■□□□□ 0.04
RNF4-215ENST00000511843 ALDH8A1Q9H2A2 487 aaPredicted RBP15.31■□□□□ 0.04
RNF4-215ENST00000511843 PSTPIP2Q9H939 334 aa15.31■□□□□ 0.04
RNF4-215ENST00000511843 RBM28Q9NW13 759 aaKnown RBP15.31■□□□□ 0.04
RNF4-215ENST00000511843 V9GY48 417 aaPredicted RBP15.31■□□□□ 0.04
RNF4-215ENST00000511843 FRMPD4Q14CM0 1322 aa15.31■□□□□ 0.04
RNF4-215ENST00000511843 GBF1Q92538 1859 aa15.31■□□□□ 0.04
RNF4-215ENST00000511843 TANC1Q9C0D5 1861 aa15.31■□□□□ 0.04
RNF4-215ENST00000511843 RBAK-RBAKDNI3L0D1 243 aa15.3■□□□□ 0.04
RNF4-215ENST00000511843 CYP2C9P11712 490 aa15.3■□□□□ 0.04
RNF4-215ENST00000511843 UBA1P22314 1058 aaKnown RBP15.3■□□□□ 0.04
RNF4-215ENST00000511843 ADD1P35611 737 aaKnown RBP15.3■□□□□ 0.04
RNF4-215ENST00000511843 METAP2P50579 478 aaKnown RBP eCLIP15.3■□□□□ 0.04
RNF4-215ENST00000511843 FPGSQ05932 587 aa15.3■□□□□ 0.04
RNF4-215ENST00000511843 LRIT3Q3SXY7 679 aa15.3■□□□□ 0.04
RNF4-215ENST00000511843 BRDTQ58F21 947 aaPredicted RBP15.3■□□□□ 0.04
RNF4-215ENST00000511843 DHX37Q8IY37 1157 aaKnown RBP15.3■□□□□ 0.04
RNF4-215ENST00000511843 LARP6Q9BRS8 491 aaKnown RBP15.3■□□□□ 0.04
RNF4-215ENST00000511843 PIK3CDO00329 1044 aa15.29■□□□□ 0.04
RNF4-215ENST00000511843 GGPS1O95749 300 aa15.29■□□□□ 0.04
RNF4-215ENST00000511843 ZNF286BP0CG31 522 aa15.29■□□□□ 0.04
RNF4-215ENST00000511843 CSF2RAP15509 400 aa15.29■□□□□ 0.04
RNF4-215ENST00000511843 SEMA3FQ13275 785 aa15.29■□□□□ 0.04
RNF4-215ENST00000511843 Q7L0L9 218 aa15.29■□□□□ 0.04
RNF4-215ENST00000511843 UPF3BQ9BZI7 483 aaKnown RBP15.29■□□□□ 0.04
RNF4-215ENST00000511843 HIPK3Q9H422 1215 aa15.29■□□□□ 0.04
RNF4-215ENST00000511843 STXBP3O00186 592 aa15.28■□□□□ 0.04
RNF4-215ENST00000511843 ACRP10323 421 aa15.28■□□□□ 0.04
RNF4-215ENST00000511843 PSMA5P28066 241 aa15.28■□□□□ 0.04
RNF4-215ENST00000511843 NAPAP54920 295 aa15.28■□□□□ 0.04
RNF4-215ENST00000511843 CCL23P55773 120 aa15.28■□□□□ 0.04
RNF4-215ENST00000511843 TOB2Q14106 344 aaPredicted RBP15.28■□□□□ 0.04
RNF4-215ENST00000511843 HSDL1Q3SXM5 330 aa15.28■□□□□ 0.04
RNF4-215ENST00000511843 CELF3Q5SZQ8 465 aaKnown RBP15.28■□□□□ 0.04
RNF4-215ENST00000511843 MFSD5Q6N075 450 aa15.28■□□□□ 0.04
RNF4-215ENST00000511843 KAT2BQ92831 832 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms