RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 NR1H4Q96RI1 486 aaPredicted RBP6.29□□□□□ -1.4
USP38-203ENST00000511739 SRPK1Q96SB4 655 aaKnown RBP6.29□□□□□ -1.4
USP38-203ENST00000511739 PRDM5Q9NQX1 630 aaPredicted RBP6.29□□□□□ -1.4
USP38-203ENST00000511739 ORC6Q9Y5N6 252 aa6.29□□□□□ -1.4
USP38-203ENST00000511739 COL4A3BPQ9Y5P4 624 aa6.29□□□□□ -1.4
USP38-203ENST00000511739 GOLGA8QA0A0J9YX86 632 aa6.29□□□□□ -1.4
USP38-203ENST00000511739 GOLGA8OA6NCC3 632 aa6.29□□□□□ -1.4
USP38-203ENST00000511739 USP17L12C9JPN9 530 aa6.29□□□□□ -1.4
USP38-203ENST00000511739 USP17L21D6R901 530 aa6.29□□□□□ -1.4
USP38-203ENST00000511739 GOLGA8NF8WBI6 632 aa6.29□□□□□ -1.4
USP38-203ENST00000511739 ESRRBO95718 433 aa6.29□□□□□ -1.4
USP38-203ENST00000511739 ARL4AP40617 200 aa6.29□□□□□ -1.4
USP38-203ENST00000511739 RASSF2P50749 326 aa6.29□□□□□ -1.4
USP38-203ENST00000511739 PTK2Q05397 1052 aa6.29□□□□□ -1.4
USP38-203ENST00000511739 PAK2Q13177 524 aa6.29□□□□□ -1.4
USP38-203ENST00000511739 ARMCX2Q7L311 632 aa6.29□□□□□ -1.4
USP38-203ENST00000511739 RFX6Q8HWS3 928 aa6.29□□□□□ -1.4
USP38-203ENST00000511739 USP44Q9H0E7 712 aa6.29□□□□□ -1.4
USP38-203ENST00000511739 LGR6Q9HBX8 967 aa6.29□□□□□ -1.4
USP38-203ENST00000511739 FAM207AQ9NSI2 230 aaPredicted RBP6.29□□□□□ -1.4
USP38-203ENST00000511739 PCDHB4Q9Y5E5 795 aa6.29□□□□□ -1.4
USP38-203ENST00000511739 SPATA31D1Q6ZQQ2 1576 aa6.29□□□□□ -1.4
USP38-203ENST00000511739 NDUFAB1O14561 156 aa6.29□□□□□ -1.4
USP38-203ENST00000511739 GSTA4O15217 222 aa6.29□□□□□ -1.4
USP38-203ENST00000511739 EVCP57679 992 aa6.29□□□□□ -1.4
USP38-203ENST00000511739 TAF11Q15544 211 aa6.29□□□□□ -1.4
USP38-203ENST00000511739 PDCD7Q8N8D1 485 aaKnown RBP6.29□□□□□ -1.4
USP38-203ENST00000511739 MLKLQ8NB16 471 aa6.29□□□□□ -1.4
USP38-203ENST00000511739 ZNF148Q9UQR1 794 aa6.29□□□□□ -1.4
USP38-203ENST00000511739 EVI5O60447 810 aa6.29□□□□□ -1.4
USP38-203ENST00000511739 GNAT1P11488 350 aa6.29□□□□□ -1.4
USP38-203ENST00000511739 ACTN1P12814 892 aa6.29□□□□□ -1.4
USP38-203ENST00000511739 PMLP29590 882 aa6.29□□□□□ -1.4
USP38-203ENST00000511739 BPIFB4P59827 614 aa6.29□□□□□ -1.4
USP38-203ENST00000511739 MYO1EQ12965 1108 aa6.29□□□□□ -1.4
USP38-203ENST00000511739 GCKRQ14397 625 aa6.29□□□□□ -1.4
USP38-203ENST00000511739 ANGPTL8Q6UXH0 198 aa6.29□□□□□ -1.4
USP38-203ENST00000511739 CCDC13Q8IYE1 715 aa6.29□□□□□ -1.4
USP38-203ENST00000511739 CDHR1Q96JP9 859 aa6.29□□□□□ -1.4
USP38-203ENST00000511739 ARMCX3Q9UH62 379 aaPredicted RBP6.29□□□□□ -1.4
USP38-203ENST00000511739 FOSP01100 380 aaPredicted RBP6.28□□□□□ -1.4
USP38-203ENST00000511739 MX2P20592 715 aa6.28□□□□□ -1.4
USP38-203ENST00000511739 ERFEQ4G0M1 354 aa6.28□□□□□ -1.4
USP38-203ENST00000511739 CCDC38Q502W7 563 aa6.28□□□□□ -1.4
USP38-203ENST00000511739 TTC23LQ6PF05 361 aa6.28□□□□□ -1.4
USP38-203ENST00000511739 THEM5Q8N1Q8 247 aa6.28□□□□□ -1.4
USP38-203ENST00000511739 PGBD3Q8N328 593 aa6.28□□□□□ -1.4
USP38-203ENST00000511739 PHKBQ93100 1093 aa6.28□□□□□ -1.4
USP38-203ENST00000511739 SUDS3Q9H7L9 328 aaPredicted RBP6.28□□□□□ -1.4
USP38-203ENST00000511739 VPS54Q9P1Q0 977 aa6.28□□□□□ -1.4
USP38-203ENST00000511739 DDX25Q9UHL0 483 aaKnown RBP6.28□□□□□ -1.4
USP38-203ENST00000511739 MAGED2Q9UNF1 606 aaPredicted RBP6.28□□□□□ -1.4
USP38-203ENST00000511739 RIPOR2Q9Y4F9 1068 aa6.28□□□□□ -1.4
USP38-203ENST00000511739 RPS6KB1P23443 525 aa6.28□□□□□ -1.4
USP38-203ENST00000511739 TECP42680 631 aa6.28□□□□□ -1.4
USP38-203ENST00000511739 YWHAGP61981 247 aaKnown RBP eCLIP6.28□□□□□ -1.4
USP38-203ENST00000511739 PPARAQ07869 468 aa6.28□□□□□ -1.4
USP38-203ENST00000511739 TUBB2AQ13885 445 aa6.28□□□□□ -1.4
USP38-203ENST00000511739 KRT71Q3SY84 523 aa6.28□□□□□ -1.4
USP38-203ENST00000511739 SPICE1Q8N0Z3 855 aa6.28□□□□□ -1.4
USP38-203ENST00000511739 NUDCD1Q96RS6 583 aa6.28□□□□□ -1.4
USP38-203ENST00000511739 TUBB2BQ9BVA1 445 aa6.28□□□□□ -1.4
USP38-203ENST00000511739 NEUROG2Q9H2A3 272 aa6.28□□□□□ -1.4
USP38-203ENST00000511739 TEKT2Q9UIF3 430 aa6.28□□□□□ -1.4
USP38-203ENST00000511739 PTPRUQ92729 1446 aa6.28□□□□□ -1.4
USP38-203ENST00000511739 LRRC7Q96NW7 1537 aa6.28□□□□□ -1.4
USP38-203ENST00000511739 REREQ9P2R6 1566 aa6.28□□□□□ -1.4
USP38-203ENST00000511739 HSPA8P11142 646 aaKnown RBP6.28□□□□□ -1.4
USP38-203ENST00000511739 NPR1P16066 1061 aa6.28□□□□□ -1.4
USP38-203ENST00000511739 CCND2P30279 289 aa6.28□□□□□ -1.4
USP38-203ENST00000511739 ZAP70P43403 619 aa6.28□□□□□ -1.4
USP38-203ENST00000511739 PPARDQ03181 441 aa6.28□□□□□ -1.4
USP38-203ENST00000511739 TYW1BQ6NUM6 668 aa6.28□□□□□ -1.4
USP38-203ENST00000511739 AFAP1L1Q8TED9 768 aa6.28□□□□□ -1.4
USP38-203ENST00000511739 MRPL46Q9H2W6 279 aaKnown RBP6.28□□□□□ -1.4
USP38-203ENST00000511739 PANK4Q9NVE7 773 aa6.28□□□□□ -1.4
USP38-203ENST00000511739 KCNJ14Q9UNX9 436 aa6.28□□□□□ -1.4
USP38-203ENST00000511739 SYNDIG1LA6NDD5 238 aa6.28□□□□□ -1.4
USP38-203ENST00000511739 ARL4DP49703 201 aa6.28□□□□□ -1.4
USP38-203ENST00000511739 SF3A3Q12874 501 aaKnown RBP eCLIP6.28□□□□□ -1.4
USP38-203ENST00000511739 TMTC1Q8IUR5 882 aa6.28□□□□□ -1.4
USP38-203ENST00000511739 PPP1R16BQ96T49 567 aa6.28□□□□□ -1.4
USP38-203ENST00000511739 INPP5FQ9Y2H2 1132 aa6.28□□□□□ -1.4
USP38-203ENST00000511739 IQSEC2Q5JU85 1478 aa6.28□□□□□ -1.4
USP38-203ENST00000511739 PNMA6EA0A0J9YXQ4 647 aa6.28□□□□□ -1.4
USP38-203ENST00000511739 RGS16O15492 202 aaPredicted RBP6.28□□□□□ -1.4
USP38-203ENST00000511739 RAD17O75943 681 aa6.28□□□□□ -1.4
USP38-203ENST00000511739 KPNA2P52292 529 aaKnown RBP6.28□□□□□ -1.4
USP38-203ENST00000511739 TFAMQ00059 246 aaKnown RBP6.28□□□□□ -1.4
USP38-203ENST00000511739 WASHC5Q12768 1159 aa6.28□□□□□ -1.4
USP38-203ENST00000511739 FOXD4Q12950 439 aaPredicted RBP6.28□□□□□ -1.4
USP38-203ENST00000511739 PDCD2Q16342 344 aaPredicted RBP6.28□□□□□ -1.4
USP38-203ENST00000511739 CC2D2BQ6DHV5 1058 aa6.28□□□□□ -1.4
USP38-203ENST00000511739 TEKT4Q8WW24 435 aa6.28□□□□□ -1.4
USP38-203ENST00000511739 CCDC17Q96LX7 622 aa6.28□□□□□ -1.4
USP38-203ENST00000511739 LLPHQ9BRT6 129 aaKnown RBP6.28□□□□□ -1.4
USP38-203ENST00000511739 TRAIPQ9BWF2 469 aa6.28□□□□□ -1.4
USP38-203ENST00000511739 TSPYL2Q9H2G4 693 aaPredicted RBP6.28□□□□□ -1.4
USP38-203ENST00000511739 BLZF1Q9H2G9 400 aa6.28□□□□□ -1.4
USP38-203ENST00000511739 NCOA5Q9HCD5 579 aaKnown RBP6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms