RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 MYOCOSA0A1B0GUC4 107 aa6.14□□□□□ -1.43
HMGB3P13-201ENST00000511263 MAFKO60675 156 aa6.14□□□□□ -1.43
HMGB3P13-201ENST00000511263 YBX1P67809 324 aaKnown RBP6.14□□□□□ -1.43
HMGB3P13-201ENST00000511263 SRSF3P84103 164 aaKnown RBP6.14□□□□□ -1.43
HMGB3P13-201ENST00000511263 TARBP2Q15633 366 aaKnown RBP6.14□□□□□ -1.43
HMGB3P13-201ENST00000511263 FRS2Q8WU20 508 aa6.14□□□□□ -1.43
HMGB3P13-201ENST00000511263 DCAF4Q8WV16 495 aa6.14□□□□□ -1.43
HMGB3P13-201ENST00000511263 CHAMP1Q96JM3 812 aa6.14□□□□□ -1.43
HMGB3P13-201ENST00000511263 DNAJC2Q99543 621 aaKnown RBP6.14□□□□□ -1.43
HMGB3P13-201ENST00000511263 NUB1Q9Y5A7 615 aa6.14□□□□□ -1.43
HMGB3P13-201ENST00000511263 A0A0U1RQG5 324 aaPredicted RBP6.13□□□□□ -1.43
HMGB3P13-201ENST00000511263 NUDT19A8MXV4 375 aa6.13□□□□□ -1.43
HMGB3P13-201ENST00000511263 RFXAPO00287 272 aa6.13□□□□□ -1.43
HMGB3P13-201ENST00000511263 PRODHO43272 600 aa6.13□□□□□ -1.43
HMGB3P13-201ENST00000511263 PABPC1P11940 636 aaKnown RBP6.13□□□□□ -1.43
HMGB3P13-201ENST00000511263 PFKLP17858 780 aa6.13□□□□□ -1.43
HMGB3P13-201ENST00000511263 SUMO1P63165 101 aaKnown RBP6.13□□□□□ -1.43
HMGB3P13-201ENST00000511263 LSAMPQ13449 338 aa6.13□□□□□ -1.43
HMGB3P13-201ENST00000511263 ZBTB38Q8NAP3 1195 aaPredicted RBP6.13□□□□□ -1.43
HMGB3P13-201ENST00000511263 TMEM145Q8NBT3 493 aa6.13□□□□□ -1.43
HMGB3P13-201ENST00000511263 TRMT2BQ96GJ1 504 aaKnown RBP6.13□□□□□ -1.43
HMGB3P13-201ENST00000511263 TMEM169Q96HH4 297 aa6.13□□□□□ -1.43
HMGB3P13-201ENST00000511263 PARD6AQ9NPB6 346 aa6.13□□□□□ -1.43
HMGB3P13-201ENST00000511263 GPR27Q9NS67 375 aa6.13□□□□□ -1.43
HMGB3P13-201ENST00000511263 SNTG2Q9NY99 539 aa6.13□□□□□ -1.43
HMGB3P13-201ENST00000511263 RWDD3Q9Y3V2 267 aa6.13□□□□□ -1.43
HMGB3P13-201ENST00000511263 ABCC8Q09428 1581 aa6.13□□□□□ -1.43
HMGB3P13-201ENST00000511263 A0A0G2JLL6 359 aaPredicted RBP6.12□□□□□ -1.43
HMGB3P13-201ENST00000511263 H7BY64 318 aa6.12□□□□□ -1.43
HMGB3P13-201ENST00000511263 AQP7O14520 342 aa6.12□□□□□ -1.43
HMGB3P13-201ENST00000511263 FUCA1P04066 466 aa6.12□□□□□ -1.43
HMGB3P13-201ENST00000511263 DBHP09172 617 aa6.12□□□□□ -1.43
HMGB3P13-201ENST00000511263 BMP7P18075 431 aa6.12□□□□□ -1.43
HMGB3P13-201ENST00000511263 TACR1P25103 407 aa6.12□□□□□ -1.43
HMGB3P13-201ENST00000511263 DLG4P78352 724 aa6.12□□□□□ -1.43
HMGB3P13-201ENST00000511263 RASA3Q14644 834 aa6.12□□□□□ -1.43
HMGB3P13-201ENST00000511263 SLC35F1Q5T1Q4 408 aa6.12□□□□□ -1.43
HMGB3P13-201ENST00000511263 WWC2Q6AWC2 1192 aa6.12□□□□□ -1.43
HMGB3P13-201ENST00000511263 USP53Q70EK8 1073 aa6.12□□□□□ -1.43
HMGB3P13-201ENST00000511263 RIOX2Q8IUF8 465 aa6.12□□□□□ -1.43
HMGB3P13-201ENST00000511263 NLGN1Q8N2Q7 840 aa6.12□□□□□ -1.43
HMGB3P13-201ENST00000511263 ZSWIM2Q8NEG5 633 aa6.12□□□□□ -1.43
HMGB3P13-201ENST00000511263 KDM2BQ8NHM5 1336 aa6.12□□□□□ -1.43
HMGB3P13-201ENST00000511263 MARCH2Q9P0N8 246 aa6.12□□□□□ -1.43
HMGB3P13-201ENST00000511263 GULP1Q9UBP9 304 aa6.12□□□□□ -1.43
HMGB3P13-201ENST00000511263 PFDN2Q9UHV9 154 aa6.12□□□□□ -1.43
HMGB3P13-201ENST00000511263 F8W031 263 aaPredicted RBP6.11□□□□□ -1.43
HMGB3P13-201ENST00000511263 TBX1O43435 398 aa6.11□□□□□ -1.43
HMGB3P13-201ENST00000511263 GALK1P51570 392 aa6.11□□□□□ -1.43
HMGB3P13-201ENST00000511263 RPTNQ6XPR3 784 aa6.11□□□□□ -1.43
HMGB3P13-201ENST00000511263 CEP68Q76N32 757 aa6.11□□□□□ -1.43
HMGB3P13-201ENST00000511263 MAMDC2Q7Z304 686 aaPredicted RBP6.11□□□□□ -1.43
HMGB3P13-201ENST00000511263 TMC6Q7Z403 805 aa6.11□□□□□ -1.43
HMGB3P13-201ENST00000511263 KREMEN2Q8NCW0 462 aa6.11□□□□□ -1.43
HMGB3P13-201ENST00000511263 PANK1Q8TE04 598 aa6.11□□□□□ -1.43
HMGB3P13-201ENST00000511263 THAP3Q8WTV1 239 aaPredicted RBP6.11□□□□□ -1.43
HMGB3P13-201ENST00000511263 SEC14L1Q92503 715 aa6.11□□□□□ -1.43
HMGB3P13-201ENST00000511263 RELTQ969Z4 430 aa6.11□□□□□ -1.43
HMGB3P13-201ENST00000511263 ALG1Q9BT22 464 aa6.11□□□□□ -1.43
HMGB3P13-201ENST00000511263 SGPP1Q9BX95 441 aa6.11□□□□□ -1.43
HMGB3P13-201ENST00000511263 PCDH18Q9HCL0 1135 aa6.11□□□□□ -1.43
HMGB3P13-201ENST00000511263 ARHGEF4Q9NR80 690 aa6.11□□□□□ -1.43
HMGB3P13-201ENST00000511263 BTG4Q9NY30 223 aa6.11□□□□□ -1.43
HMGB3P13-201ENST00000511263 KLHL14Q9P2G3 628 aa6.11□□□□□ -1.43
HMGB3P13-201ENST00000511263 JAG2Q9Y219 1238 aa6.11□□□□□ -1.43
HMGB3P13-201ENST00000511263 PCDHA2Q9Y5H9 948 aa6.11□□□□□ -1.43
HMGB3P13-201ENST00000511263 TRBV23-1A0A0A0MS06 115 aa6.1□□□□□ -1.43
HMGB3P13-201ENST00000511263 C22orf46C9J442 243 aa6.1□□□□□ -1.43
HMGB3P13-201ENST00000511263 KRIT1O00522 736 aa6.1□□□□□ -1.43
HMGB3P13-201ENST00000511263 DLX3O60479 287 aa6.1□□□□□ -1.43
HMGB3P13-201ENST00000511263 DGKIO75912 1065 aa6.1□□□□□ -1.43
HMGB3P13-201ENST00000511263 MSL3P1P0C860 447 aa6.1□□□□□ -1.43
HMGB3P13-201ENST00000511263 GLI4P10075 376 aa6.1□□□□□ -1.43
HMGB3P13-201ENST00000511263 VIPR1P32241 457 aa6.1□□□□□ -1.43
HMGB3P13-201ENST00000511263 SLC6A11P48066 632 aa6.1□□□□□ -1.43
HMGB3P13-201ENST00000511263 CEBPAP49715 358 aaPredicted RBP6.1□□□□□ -1.43
HMGB3P13-201ENST00000511263 KIZQ2M2Z5 673 aa6.1□□□□□ -1.43
HMGB3P13-201ENST00000511263 SPATC1Q76KD6 591 aa6.1□□□□□ -1.43
HMGB3P13-201ENST00000511263 IFNL3Q8IZI9 196 aa6.1□□□□□ -1.43
HMGB3P13-201ENST00000511263 TSPAN17Q96FV3 270 aa6.1□□□□□ -1.43
HMGB3P13-201ENST00000511263 MTA3Q9BTC8 594 aa6.1□□□□□ -1.43
HMGB3P13-201ENST00000511263 LGR4Q9BXB1 951 aa6.1□□□□□ -1.43
HMGB3P13-201ENST00000511263 KRTAP17-1Q9BYP8 105 aa6.1□□□□□ -1.43
HMGB3P13-201ENST00000511263 RNF38Q9H0F5 515 aa6.1□□□□□ -1.43
HMGB3P13-201ENST00000511263 ZCCHC4Q9H5U6 513 aa6.1□□□□□ -1.43
HMGB3P13-201ENST00000511263 ZSWIM4Q9H7M6 989 aa6.1□□□□□ -1.43
HMGB3P13-201ENST00000511263 GCM1Q9NP62 436 aa6.1□□□□□ -1.43
HMGB3P13-201ENST00000511263 NGRNQ9NPE2 291 aaKnown RBP6.1□□□□□ -1.43
HMGB3P13-201ENST00000511263 FAN1Q9Y2M0 1017 aa6.1□□□□□ -1.43
HMGB3P13-201ENST00000511263 NPFFR2Q9Y5X5 522 aa6.1□□□□□ -1.43
HMGB3P13-201ENST00000511263 N4BP3O15049 544 aa6.09□□□□□ -1.43
HMGB3P13-201ENST00000511263 GSTA4O15217 222 aa6.09□□□□□ -1.43
HMGB3P13-201ENST00000511263 EFCAB14O75071 495 aa6.09□□□□□ -1.43
HMGB3P13-201ENST00000511263 CAPNS1P04632 268 aa6.09□□□□□ -1.43
HMGB3P13-201ENST00000511263 NCAM1P13591 858 aa6.09□□□□□ -1.43
HMGB3P13-201ENST00000511263 NCLP19338 710 aaKnown RBP6.09□□□□□ -1.43
HMGB3P13-201ENST00000511263 GABREP78334 506 aa6.09□□□□□ -1.43
HMGB3P13-201ENST00000511263 PRSS53Q2L4Q9 553 aa6.09□□□□□ -1.43
HMGB3P13-201ENST00000511263 PLEKHN1Q494U1 663 aaPredicted RBP6.09□□□□□ -1.43
HMGB3P13-201ENST00000511263 ZNF385BQ569K4 471 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms