RNA–Protein interactions for RNA: ENST00000511214.1

SNF8-210, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-210ENST00000511214 ZMYND10O75800 440 aa10.06□□□□□ -0.8
SNF8-210ENST00000511214 MOCS3O95396 460 aa10.06□□□□□ -0.8
SNF8-210ENST00000511214 SERPING1P05155 500 aa10.06□□□□□ -0.8
SNF8-210ENST00000511214 VEGFAP15692 232 aaPredicted RBP10.06□□□□□ -0.8
SNF8-210ENST00000511214 CCT5P48643 541 aa10.06□□□□□ -0.8
SNF8-210ENST00000511214 KLK7P49862 253 aa10.06□□□□□ -0.8
SNF8-210ENST00000511214 GTF2A1P52655 376 aaPredicted RBP10.06□□□□□ -0.8
SNF8-210ENST00000511214 MARSP56192 900 aaKnown RBP10.06□□□□□ -0.8
SNF8-210ENST00000511214 EHHADHQ08426 723 aa10.06□□□□□ -0.8
SNF8-210ENST00000511214 TMEM266Q2M3C6 531 aa10.06□□□□□ -0.8
SNF8-210ENST00000511214 SLC9C1Q4G0N8 1177 aa10.06□□□□□ -0.8
SNF8-210ENST00000511214 SOGA3Q5TF21 947 aa10.06□□□□□ -0.8
SNF8-210ENST00000511214 HEATR3Q7Z4Q2 680 aa10.06□□□□□ -0.8
SNF8-210ENST00000511214 IQCKQ8N0W5 287 aa10.06□□□□□ -0.8
SNF8-210ENST00000511214 ARFGAP2Q8N6H7 521 aa10.06□□□□□ -0.8
SNF8-210ENST00000511214 BCAS4Q8TDM0 211 aa10.06□□□□□ -0.8
SNF8-210ENST00000511214 LRRC15Q8TF66 581 aa10.06□□□□□ -0.8
SNF8-210ENST00000511214 RIN2Q8WYP3 895 aaPredicted RBP10.06□□□□□ -0.8
SNF8-210ENST00000511214 CEP63Q96MT8 703 aa10.06□□□□□ -0.8
SNF8-210ENST00000511214 TLR10Q9BXR5 811 aa10.06□□□□□ -0.8
SNF8-210ENST00000511214 MLXIPQ9HAP2 919 aa10.06□□□□□ -0.8
SNF8-210ENST00000511214 MCM9Q9NXL9 1143 aa10.06□□□□□ -0.8
SNF8-210ENST00000511214 BTG4Q9NY30 223 aa10.06□□□□□ -0.8
SNF8-210ENST00000511214 CEP72Q9P209 647 aa10.06□□□□□ -0.8
SNF8-210ENST00000511214 TFR2Q9UP52 801 aa10.06□□□□□ -0.8
SNF8-210ENST00000511214 DUSP10Q9Y6W6 482 aa10.06□□□□□ -0.8
SNF8-210ENST00000511214 CCDC88AQ3V6T2 1871 aa10.05□□□□□ -0.8
SNF8-210ENST00000511214 LOC102724428A0A0B4J2F2 783 aa10.05□□□□□ -0.8
SNF8-210ENST00000511214 LRRC53A6NM62 1247 aa10.05□□□□□ -0.8
SNF8-210ENST00000511214 HMGB1P1B2RPK0 211 aaPredicted RBP10.05□□□□□ -0.8
SNF8-210ENST00000511214 PITPNM1O00562 1244 aa10.05□□□□□ -0.8
SNF8-210ENST00000511214 CYTH3O43739 400 aa10.05□□□□□ -0.8
SNF8-210ENST00000511214 LDHCP07864 332 aa10.05□□□□□ -0.8
SNF8-210ENST00000511214 CYP2D6P10635 497 aa10.05□□□□□ -0.8
SNF8-210ENST00000511214 INPP5BP32019 993 aa10.05□□□□□ -0.8
SNF8-210ENST00000511214 ATP6V1AP38606 617 aa10.05□□□□□ -0.8
SNF8-210ENST00000511214 NAPAP54920 295 aa10.05□□□□□ -0.8
SNF8-210ENST00000511214 SIK1P57059 783 aa10.05□□□□□ -0.8
SNF8-210ENST00000511214 TNNC1P63316 161 aa10.05□□□□□ -0.8
SNF8-210ENST00000511214 DRP2Q13474 957 aa10.05□□□□□ -0.8
SNF8-210ENST00000511214 PLCB4Q15147 1175 aa10.05□□□□□ -0.8
SNF8-210ENST00000511214 NAB2Q15742 525 aa10.05□□□□□ -0.8
SNF8-210ENST00000511214 CFAP58Q5T655 872 aa10.05□□□□□ -0.8
SNF8-210ENST00000511214 KLHDC7AQ5VTJ3 777 aa10.05□□□□□ -0.8
SNF8-210ENST00000511214 MCTP2Q6DN12 878 aa10.05□□□□□ -0.8
SNF8-210ENST00000511214 LRRC55Q6ZSA7 311 aa10.05□□□□□ -0.8
SNF8-210ENST00000511214 RRAGAQ7L523 313 aa10.05□□□□□ -0.8
SNF8-210ENST00000511214 RPAINQ86UA6 219 aa10.05□□□□□ -0.8
SNF8-210ENST00000511214 GSPT2Q8IYD1 628 aaKnown RBP10.05□□□□□ -0.8
SNF8-210ENST00000511214 ZNF444Q8N0Y2 327 aaPredicted RBP10.05□□□□□ -0.8
SNF8-210ENST00000511214 STAG2Q8N3U4 1231 aa10.05□□□□□ -0.8
SNF8-210ENST00000511214 WDR66Q8TBY9 1149 aa10.05□□□□□ -0.8
SNF8-210ENST00000511214 RASGRP4Q8TDF6 673 aa10.05□□□□□ -0.8
SNF8-210ENST00000511214 RRP36Q96EU6 259 aaKnown RBP10.05□□□□□ -0.8
SNF8-210ENST00000511214 MTMR9Q96QG7 549 aa10.05□□□□□ -0.8
SNF8-210ENST00000511214 MMTAG2Q9BU76 263 aaKnown RBP10.05□□□□□ -0.8
SNF8-210ENST00000511214 MMRN2Q9H8L6 949 aa10.05□□□□□ -0.8
SNF8-210ENST00000511214 PCDHGC5Q9Y5F6 944 aa10.05□□□□□ -0.8
SNF8-210ENST00000511214 TNRC6CQ9HCJ0 1690 aaKnown RBP10.05□□□□□ -0.8
SNF8-210ENST00000511214 SMCO2A6NFE2 343 aa10.04□□□□□ -0.8
SNF8-210ENST00000511214 MYMKA6NI61 221 aa10.04□□□□□ -0.8
SNF8-210ENST00000511214 CCNT1O60563 726 aaKnown RBP10.04□□□□□ -0.8
SNF8-210ENST00000511214 KIAA0754O94854 1291 aa10.04□□□□□ -0.8
SNF8-210ENST00000511214 FSBPO95073 299 aa10.04□□□□□ -0.8
SNF8-210ENST00000511214 BAG3O95817 575 aa10.04□□□□□ -0.8
SNF8-210ENST00000511214 PLEKP08567 350 aaPredicted RBP10.04□□□□□ -0.8
SNF8-210ENST00000511214 TSPY3P0CV98 308 aa10.04□□□□□ -0.8
SNF8-210ENST00000511214 TSPY8P0CW00 308 aa10.04□□□□□ -0.8
SNF8-210ENST00000511214 MYBP10242 640 aa10.04□□□□□ -0.8
SNF8-210ENST00000511214 FCER1AP12319 257 aa10.04□□□□□ -0.8
SNF8-210ENST00000511214 HSPA9P38646 679 aaKnown RBP10.04□□□□□ -0.8
SNF8-210ENST00000511214 NOVP48745 357 aa10.04□□□□□ -0.8
SNF8-210ENST00000511214 GRB10Q13322 594 aa10.04□□□□□ -0.8
SNF8-210ENST00000511214 CDC37Q16543 378 aaPredicted RBP10.04□□□□□ -0.8
SNF8-210ENST00000511214 IFI16Q16666 785 aaKnown RBP10.04□□□□□ -0.8
SNF8-210ENST00000511214 SLC35G1Q2M3R5 365 aa10.04□□□□□ -0.8
SNF8-210ENST00000511214 TMEM119Q4V9L6 283 aa10.04□□□□□ -0.8
SNF8-210ENST00000511214 TTMPQ5BVD1 217 aa10.04□□□□□ -0.8
SNF8-210ENST00000511214 SFMBT2Q5VUG0 894 aa10.04□□□□□ -0.8
SNF8-210ENST00000511214 HGSNATQ68CP4 663 aa10.04□□□□□ -0.8
SNF8-210ENST00000511214 PPP4R3AQ6IN85 833 aa10.04□□□□□ -0.8
SNF8-210ENST00000511214 PPP1R18Q6NYC8 613 aa10.04□□□□□ -0.8
SNF8-210ENST00000511214 NFRKBQ6P4R8 1299 aa10.04□□□□□ -0.8
SNF8-210ENST00000511214 CACNA2D4Q7Z3S7 1137 aa10.04□□□□□ -0.8
SNF8-210ENST00000511214 KRT26Q7Z3Y9 468 aa10.04□□□□□ -0.8
SNF8-210ENST00000511214 CNPY4Q8N129 248 aa10.04□□□□□ -0.8
SNF8-210ENST00000511214 MICALL1Q8N3F8 863 aa10.04□□□□□ -0.8
SNF8-210ENST00000511214 TSEN2Q8NCE0 465 aaKnown RBP10.04□□□□□ -0.8
SNF8-210ENST00000511214 HDAC7Q8WUI4 952 aa10.04□□□□□ -0.8
SNF8-210ENST00000511214 LARP4BQ92615 738 aaKnown RBP10.04□□□□□ -0.8
SNF8-210ENST00000511214 RAD54LQ92698 747 aa10.04□□□□□ -0.8
SNF8-210ENST00000511214 PBKQ96KB5 322 aa10.04□□□□□ -0.8
SNF8-210ENST00000511214 ZIM3Q96PE6 472 aa10.04□□□□□ -0.8
SNF8-210ENST00000511214 NAP1L4Q99733 375 aaKnown RBP10.04□□□□□ -0.8
SNF8-210ENST00000511214 TMEM47Q9BQJ4 181 aa10.04□□□□□ -0.8
SNF8-210ENST00000511214 TACO1Q9BSH4 297 aaKnown RBP10.04□□□□□ -0.8
SNF8-210ENST00000511214 NYXQ9GZU5 481 aa10.04□□□□□ -0.8
SNF8-210ENST00000511214 EPN3Q9H201 632 aa10.04□□□□□ -0.8
SNF8-210ENST00000511214 MKNK2Q9HBH9 465 aa10.04□□□□□ -0.8
SNF8-210ENST00000511214 BLOC1S4Q9NUP1 217 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms