RNA–Protein interactions for RNA: ENST00000511013.2

AP003555.1-202, humanhuman

TSL 1 (best) BASIC

Gene AP003555.1, Length 1,755 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003555.1-202ENST00000511013 CLK2P49760 499 aaKnown RBP15.82■□□□□ 0.12
AP003555.1-202ENST00000511013 USP14P54578 494 aa15.82■□□□□ 0.12
AP003555.1-202ENST00000511013 NCAPH2Q6IBW4 605 aa15.82■□□□□ 0.12
AP003555.1-202ENST00000511013 DYMQ7RTS9 669 aa15.82■□□□□ 0.12
AP003555.1-202ENST00000511013 DDX12PQ92771 950 aa15.82■□□□□ 0.12
AP003555.1-202ENST00000511013 CCDC17Q96LX7 622 aa15.82■□□□□ 0.12
AP003555.1-202ENST00000511013 NT5C3AQ9H0P0 336 aa15.82■□□□□ 0.12
AP003555.1-202ENST00000511013 ATP6V0A2Q9Y487 856 aa15.82■□□□□ 0.12
AP003555.1-202ENST00000511013 QSER1Q2KHR3 1735 aa15.82■□□□□ 0.12
AP003555.1-202ENST00000511013 TARSL2A2RTX5 802 aaKnown RBP15.81■□□□□ 0.12
AP003555.1-202ENST00000511013 ZBTB5O15062 677 aa15.81■□□□□ 0.12
AP003555.1-202ENST00000511013 EDIL3O43854 480 aa15.81■□□□□ 0.12
AP003555.1-202ENST00000511013 ONECUT3O60422 494 aaPredicted RBP15.81■□□□□ 0.12
AP003555.1-202ENST00000511013 ATP1A1P05023 1023 aaKnown RBP15.81■□□□□ 0.12
AP003555.1-202ENST00000511013 VSNL1P62760 191 aa15.81■□□□□ 0.12
AP003555.1-202ENST00000511013 EHHADHQ08426 723 aa15.81■□□□□ 0.12
AP003555.1-202ENST00000511013 MAP9Q49MG5 647 aa15.81■□□□□ 0.12
AP003555.1-202ENST00000511013 MYOCDQ8IZQ8 938 aa15.81■□□□□ 0.12
AP003555.1-202ENST00000511013 NOA1Q8NC60 698 aaKnown RBP15.81■□□□□ 0.12
AP003555.1-202ENST00000511013 SECISBP2LQ93073 1101 aaKnown RBP15.81■□□□□ 0.12
AP003555.1-202ENST00000511013 HPS3Q969F9 1004 aa15.81■□□□□ 0.12
AP003555.1-202ENST00000511013 EEF2KMTQ96G04 330 aa15.81■□□□□ 0.12
AP003555.1-202ENST00000511013 PSTPIP2Q9H939 334 aa15.81■□□□□ 0.12
AP003555.1-202ENST00000511013 CALCOCO1Q9P1Z2 691 aa15.81■□□□□ 0.12
AP003555.1-202ENST00000511013 MYH4Q9Y623 1939 aa15.8■□□□□ 0.12
AP003555.1-202ENST00000511013 POTEMA6NI47 508 aa15.8■□□□□ 0.12
AP003555.1-202ENST00000511013 POLRMTO00411 1230 aaKnown RBP15.8■□□□□ 0.12
AP003555.1-202ENST00000511013 RIMBP2O15034 1052 aa15.8■□□□□ 0.12
AP003555.1-202ENST00000511013 TACC1O75410 805 aa15.8■□□□□ 0.12
AP003555.1-202ENST00000511013 EIF6P56537 245 aaKnown RBP15.8■□□□□ 0.12
AP003555.1-202ENST00000511013 CCDC96Q2M329 555 aa15.8■□□□□ 0.12
AP003555.1-202ENST00000511013 HYIQ5T013 277 aa15.8■□□□□ 0.12
AP003555.1-202ENST00000511013 HHIPL2Q6UWX4 724 aa15.8■□□□□ 0.12
AP003555.1-202ENST00000511013 TRIM58Q8NG06 486 aa15.8■□□□□ 0.12
AP003555.1-202ENST00000511013 MTMR8Q96EF0 704 aa15.8■□□□□ 0.12
AP003555.1-202ENST00000511013 LACRTQ9GZZ8 138 aa15.8■□□□□ 0.12
AP003555.1-202ENST00000511013 MMRN2Q9H8L6 949 aa15.8■□□□□ 0.12
AP003555.1-202ENST00000511013 DDX4Q9NQI0 724 aaKnown RBP15.8■□□□□ 0.12
AP003555.1-202ENST00000511013 PSD3Q9NYI0 1048 aa15.8■□□□□ 0.12
AP003555.1-202ENST00000511013 MYH7BA7E2Y1 1941 aa15.8■□□□□ 0.12
AP003555.1-202ENST00000511013 ENC1O14682 589 aa15.8■□□□□ 0.12
AP003555.1-202ENST00000511013 LCA5LO95447 670 aa15.8■□□□□ 0.12
AP003555.1-202ENST00000511013 SHMT1P34896 483 aa15.8■□□□□ 0.12
AP003555.1-202ENST00000511013 DDR1Q08345 913 aa15.8■□□□□ 0.12
AP003555.1-202ENST00000511013 UBE2SQ16763 222 aa15.8■□□□□ 0.12
AP003555.1-202ENST00000511013 MCTP2Q6DN12 878 aa15.8■□□□□ 0.12
AP003555.1-202ENST00000511013 NEK11Q8NG66 645 aa15.8■□□□□ 0.12
AP003555.1-202ENST00000511013 EXOC4Q96A65 974 aa15.8■□□□□ 0.12
AP003555.1-202ENST00000511013 NUCKS1Q9H1E3 243 aaKnown RBP15.8■□□□□ 0.12
AP003555.1-202ENST00000511013 EHD4Q9H223 541 aa15.8■□□□□ 0.12
AP003555.1-202ENST00000511013 ZCCHC17Q9NP64 241 aaKnown RBP15.8■□□□□ 0.12
AP003555.1-202ENST00000511013 HDAC6Q9UBN7 1215 aa15.8■□□□□ 0.12
AP003555.1-202ENST00000511013 PCDHA12Q9UN75 941 aa15.8■□□□□ 0.12
AP003555.1-202ENST00000511013 GNA14O95837 355 aa15.79■□□□□ 0.12
AP003555.1-202ENST00000511013 TFRCP02786 760 aaKnown RBP15.79■□□□□ 0.12
AP003555.1-202ENST00000511013 FKBP3Q00688 224 aaKnown RBP15.79■□□□□ 0.12
AP003555.1-202ENST00000511013 CCDC70Q6NSX1 233 aa15.79■□□□□ 0.12
AP003555.1-202ENST00000511013 C2CD5Q86YS7 1000 aa15.79■□□□□ 0.12
AP003555.1-202ENST00000511013 CCDC65Q8IXS2 484 aa15.79■□□□□ 0.12
AP003555.1-202ENST00000511013 CAGE1Q8TC20 777 aa15.79■□□□□ 0.12
AP003555.1-202ENST00000511013 CEP63Q96MT8 703 aa15.79■□□□□ 0.12
AP003555.1-202ENST00000511013 MMS19Q96T76 1030 aa15.79■□□□□ 0.12
AP003555.1-202ENST00000511013 DEF6Q9H4E7 631 aa15.79■□□□□ 0.12
AP003555.1-202ENST00000511013 JRKLQ9Y4A0 524 aa15.79■□□□□ 0.12
AP003555.1-202ENST00000511013 PCDHA13Q9Y5I0 950 aa15.79■□□□□ 0.12
AP003555.1-202ENST00000511013 GREB1LQ9C091 1923 aaPredicted RBP15.79■□□□□ 0.12
AP003555.1-202ENST00000511013 RCCD1A6NED2 376 aa15.78■□□□□ 0.12
AP003555.1-202ENST00000511013 F8W031 263 aaPredicted RBP15.78■□□□□ 0.12
AP003555.1-202ENST00000511013 MPHOSPH10O00566 681 aaKnown RBP15.78■□□□□ 0.12
AP003555.1-202ENST00000511013 PPP1R11O60927 126 aaPredicted RBP15.78■□□□□ 0.12
AP003555.1-202ENST00000511013 PRLRP16471 622 aa15.78■□□□□ 0.12
AP003555.1-202ENST00000511013 USP11P51784 963 aa15.78■□□□□ 0.12
AP003555.1-202ENST00000511013 CYP27A1Q02318 531 aa15.78■□□□□ 0.12
AP003555.1-202ENST00000511013 CASP8Q14790 479 aa15.78■□□□□ 0.12
AP003555.1-202ENST00000511013 HSP90B2PQ58FF3 399 aa15.78■□□□□ 0.12
AP003555.1-202ENST00000511013 TTBK2Q6IQ55 1244 aa15.78■□□□□ 0.12
AP003555.1-202ENST00000511013 LRRC55Q6ZSA7 311 aa15.78■□□□□ 0.12
AP003555.1-202ENST00000511013 CERS5Q8N5B7 392 aa15.78■□□□□ 0.12
AP003555.1-202ENST00000511013 HAS1Q92839 578 aa15.78■□□□□ 0.12
AP003555.1-202ENST00000511013 TEKT1Q969V4 418 aa15.78■□□□□ 0.12
AP003555.1-202ENST00000511013 DNAJC19Q96DA6 116 aa15.78■□□□□ 0.12
AP003555.1-202ENST00000511013 NUDT12Q9BQG2 462 aa15.78■□□□□ 0.12
AP003555.1-202ENST00000511013 IFIH1Q9BYX4 1025 aaKnown RBP15.78■□□□□ 0.12
AP003555.1-202ENST00000511013 TMX4Q9H1E5 349 aaPredicted RBP15.78■□□□□ 0.12
AP003555.1-202ENST00000511013 VIPAS39Q9H9C1 493 aa15.78■□□□□ 0.12
AP003555.1-202ENST00000511013 PDE11AQ9HCR9 933 aa15.78■□□□□ 0.12
AP003555.1-202ENST00000511013 FAM207AQ9NSI2 230 aaPredicted RBP15.78■□□□□ 0.12
AP003555.1-202ENST00000511013 PANK4Q9NVE7 773 aa15.78■□□□□ 0.12
AP003555.1-202ENST00000511013 ATF5Q9Y2D1 282 aaPredicted RBP15.78■□□□□ 0.12
AP003555.1-202ENST00000511013 USP17L10C9JJH3 530 aa15.77■□□□□ 0.12
AP003555.1-202ENST00000511013 G3V3G9 751 aa15.77■□□□□ 0.12
AP003555.1-202ENST00000511013 EIF4A3P38919 411 aaKnown RBP15.77■□□□□ 0.12
AP003555.1-202ENST00000511013 ATP2B2Q01814 1243 aa15.77■□□□□ 0.12
AP003555.1-202ENST00000511013 COASYQ13057 564 aa15.77■□□□□ 0.12
AP003555.1-202ENST00000511013 FAM26FQ5R3K3 315 aa15.77■□□□□ 0.12
AP003555.1-202ENST00000511013 DCAF8Q5TAQ9 597 aa15.77■□□□□ 0.12
AP003555.1-202ENST00000511013 MEX3CQ5U5Q3 659 aaKnown RBP15.77■□□□□ 0.12
AP003555.1-202ENST00000511013 CDC42EP5Q6NZY7 148 aa15.77■□□□□ 0.12
AP003555.1-202ENST00000511013 CACNA2D4Q7Z3S7 1137 aa15.77■□□□□ 0.12
AP003555.1-202ENST00000511013 KCNK18Q7Z418 384 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms