RNA–Protein interactions for RNA: ENST00000510779.1

SH3TC2-208, Transcript of SH3 domain and tetratricopeptide repeats 2, humanhuman

TSL 1 (best)

Gene SH3TC2, Length 3,077 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC2-208ENST00000510779 HVCN1Q96D96 273 aa13.49□□□□□ -0.25
SH3TC2-208ENST00000510779 CCDC113Q9H0I3 377 aa13.49□□□□□ -0.25
SH3TC2-208ENST00000510779 DPH5Q9H2P9 285 aa13.49□□□□□ -0.25
SH3TC2-208ENST00000510779 ACTR5Q9H9F9 607 aaPredicted RBP13.49□□□□□ -0.25
SH3TC2-208ENST00000510779 FAM205AQ6ZU69 1335 aa13.49□□□□□ -0.25
SH3TC2-208ENST00000510779 TECP42680 631 aa13.48□□□□□ -0.25
SH3TC2-208ENST00000510779 FUT2Q10981 343 aa13.48□□□□□ -0.25
SH3TC2-208ENST00000510779 NAIF1Q69YI7 327 aaPredicted RBP13.48□□□□□ -0.25
SH3TC2-208ENST00000510779 YTHDF3Q7Z739 585 aaKnown RBP13.48□□□□□ -0.25
SH3TC2-208ENST00000510779 ADGRA1Q86SQ6 560 aa13.48□□□□□ -0.25
SH3TC2-208ENST00000510779 TNFRSF25Q93038 417 aa13.48□□□□□ -0.25
SH3TC2-208ENST00000510779 TRIM6Q9C030 488 aaPredicted RBP13.48□□□□□ -0.25
SH3TC2-208ENST00000510779 LUC7LQ9NQ29 371 aaKnown RBP13.48□□□□□ -0.25
SH3TC2-208ENST00000510779 A1CFQ9NQ94 594 aaKnown RBP13.48□□□□□ -0.25
SH3TC2-208ENST00000510779 ADAMTS1Q9UHI8 967 aa13.48□□□□□ -0.25
SH3TC2-208ENST00000510779 LEMD3Q9Y2U8 911 aa13.48□□□□□ -0.25
SH3TC2-208ENST00000510779 CALM1P0DP23 149 aa13.48□□□□□ -0.25
SH3TC2-208ENST00000510779 CALM2P0DP24 149 aa13.48□□□□□ -0.25
SH3TC2-208ENST00000510779 CALM3P0DP25 149 aa13.48□□□□□ -0.25
SH3TC2-208ENST00000510779 SCTRP47872 440 aa13.48□□□□□ -0.25
SH3TC2-208ENST00000510779 POLR2FP61218 127 aaKnown RBP13.48□□□□□ -0.25
SH3TC2-208ENST00000510779 ITIH3Q06033 890 aa13.48□□□□□ -0.25
SH3TC2-208ENST00000510779 MYO1EQ12965 1108 aa13.48□□□□□ -0.25
SH3TC2-208ENST00000510779 SLC9C1Q4G0N8 1177 aa13.48□□□□□ -0.25
SH3TC2-208ENST00000510779 NLRP10Q86W26 655 aa13.48□□□□□ -0.25
SH3TC2-208ENST00000510779 GDF3Q9NR23 364 aa13.48□□□□□ -0.25
SH3TC2-208ENST00000510779 KLRC1P26715 233 aa13.48□□□□□ -0.25
SH3TC2-208ENST00000510779 CALML3P27482 149 aa13.48□□□□□ -0.25
SH3TC2-208ENST00000510779 CDC25CP30307 473 aa13.48□□□□□ -0.25
SH3TC2-208ENST00000510779 EPS15P42566 896 aa13.48□□□□□ -0.25
SH3TC2-208ENST00000510779 TRAPPC10P48553 1259 aa13.48□□□□□ -0.25
SH3TC2-208ENST00000510779 KCNB1Q14721 858 aa13.48□□□□□ -0.25
SH3TC2-208ENST00000510779 TXNRD1Q16881 649 aa13.48□□□□□ -0.25
SH3TC2-208ENST00000510779 ANKRD20A8PQ5CZ79 823 aa13.48□□□□□ -0.25
SH3TC2-208ENST00000510779 ARL6IP4Q66PJ3 421 aaKnown RBP13.48□□□□□ -0.25
SH3TC2-208ENST00000510779 CCDC84Q86UT8 332 aaPredicted RBP13.48□□□□□ -0.25
SH3TC2-208ENST00000510779 RSRC1Q96IZ7 334 aaKnown RBP13.48□□□□□ -0.25
SH3TC2-208ENST00000510779 CDK5RAP3Q96JB5 506 aa13.48□□□□□ -0.25
SH3TC2-208ENST00000510779 ERGIC2Q96RQ1 377 aa13.48□□□□□ -0.25
SH3TC2-208ENST00000510779 EIF4E1BA6NMX2 242 aaKnown RBP13.47□□□□□ -0.25
SH3TC2-208ENST00000510779 TULP1O00294 542 aaPredicted RBP13.47□□□□□ -0.25
SH3TC2-208ENST00000510779 FAM133BQ5BKY9 247 aaKnown RBP13.47□□□□□ -0.25
SH3TC2-208ENST00000510779 RUFY4Q6ZNE9 571 aa13.47□□□□□ -0.25
SH3TC2-208ENST00000510779 TBC1D1Q86TI0 1168 aaPredicted RBP13.47□□□□□ -0.25
SH3TC2-208ENST00000510779 CCDC50Q8IVM0 306 aa13.47□□□□□ -0.25
SH3TC2-208ENST00000510779 TEX11Q8IYF3 940 aa13.47□□□□□ -0.25
SH3TC2-208ENST00000510779 RUBCNQ92622 972 aa13.47□□□□□ -0.25
SH3TC2-208ENST00000510779 DDX47Q9H0S4 455 aaKnown RBP13.47□□□□□ -0.25
SH3TC2-208ENST00000510779 TAF1DQ9H5J8 278 aaPredicted RBP13.47□□□□□ -0.25
SH3TC2-208ENST00000510779 TMBIM4Q9HC24 238 aa13.47□□□□□ -0.25
SH3TC2-208ENST00000510779 FBXL5Q9UKA1 691 aa13.47□□□□□ -0.25
SH3TC2-208ENST00000510779 XIRP1Q702N8 1843 aaKnown RBP13.47□□□□□ -0.25
SH3TC2-208ENST00000510779 CNTNAP5Q8WYK1 1306 aa13.47□□□□□ -0.25
SH3TC2-208ENST00000510779 DCDC2CA8MYV0 355 aa13.47□□□□□ -0.25
SH3TC2-208ENST00000510779 CCNT1O60563 726 aaKnown RBP13.47□□□□□ -0.25
SH3TC2-208ENST00000510779 CTNND1O60716 968 aaKnown RBP13.47□□□□□ -0.25
SH3TC2-208ENST00000510779 GCKP35557 465 aa13.47□□□□□ -0.25
SH3TC2-208ENST00000510779 RPS6KA1Q15418 735 aa13.47□□□□□ -0.25
SH3TC2-208ENST00000510779 PPP4R3AQ6IN85 833 aa13.47□□□□□ -0.25
SH3TC2-208ENST00000510779 ADAT2Q7Z6V5 191 aaKnown RBP13.47□□□□□ -0.25
SH3TC2-208ENST00000510779 TAX1BP1Q86VP1 789 aa13.47□□□□□ -0.25
SH3TC2-208ENST00000510779 VGLL2Q8N8G2 317 aa13.47□□□□□ -0.25
SH3TC2-208ENST00000510779 UHMK1Q8TAS1 419 aaKnown RBP13.47□□□□□ -0.25
SH3TC2-208ENST00000510779 RAPGEF5Q92565 580 aa13.47□□□□□ -0.25
SH3TC2-208ENST00000510779 LRRC45Q96CN5 670 aa13.47□□□□□ -0.25
SH3TC2-208ENST00000510779 UIMC1Q96RL1 719 aa13.47□□□□□ -0.25
SH3TC2-208ENST00000510779 TACO1Q9BSH4 297 aaKnown RBP13.47□□□□□ -0.25
SH3TC2-208ENST00000510779 TRIM9Q9C026 710 aa13.47□□□□□ -0.25
SH3TC2-208ENST00000510779 GGT7Q9UJ14 662 aa13.47□□□□□ -0.25
SH3TC2-208ENST00000510779 TSKSQ9UJT2 592 aa13.47□□□□□ -0.25
SH3TC2-208ENST00000510779 PRPF4BQ13523 1007 aaKnown RBP13.46□□□□□ -0.25
SH3TC2-208ENST00000510779 CDC37Q16543 378 aaPredicted RBP13.46□□□□□ -0.25
SH3TC2-208ENST00000510779 ACCSLQ4AC99 568 aa13.46□□□□□ -0.25
SH3TC2-208ENST00000510779 SFMBT2Q5VUG0 894 aa13.46□□□□□ -0.25
SH3TC2-208ENST00000510779 PACSIN1Q9BY11 444 aa13.46□□□□□ -0.25
SH3TC2-208ENST00000510779 TBC1D7Q9P0N9 293 aa13.46□□□□□ -0.25
SH3TC2-208ENST00000510779 MARF1Q9Y4F3 1742 aaKnown RBP13.46□□□□□ -0.25
SH3TC2-208ENST00000510779 ERVK-9P63128 1117 aa13.46□□□□□ -0.25
SH3TC2-208ENST00000510779 PPP2R2AP63151 447 aa13.46□□□□□ -0.25
SH3TC2-208ENST00000510779 CNNM4Q6P4Q7 775 aa13.46□□□□□ -0.25
SH3TC2-208ENST00000510779 ZNF512BQ96KM6 892 aaPredicted RBP13.46□□□□□ -0.25
SH3TC2-208ENST00000510779 SEMA6BQ9H3T3 888 aa13.46□□□□□ -0.25
SH3TC2-208ENST00000510779 TMOD3Q9NYL9 352 aa13.46□□□□□ -0.25
SH3TC2-208ENST00000510779 ATXN2Q99700 1313 aaKnown RBP13.46□□□□□ -0.26
SH3TC2-208ENST00000510779 KAT6BQ8WYB5 2073 aa13.46□□□□□ -0.26
SH3TC2-208ENST00000510779 SLC8A1P32418 973 aa13.45□□□□□ -0.26
SH3TC2-208ENST00000510779 TXKP42681 527 aa13.45□□□□□ -0.26
SH3TC2-208ENST00000510779 AMPD3Q01432 767 aa13.45□□□□□ -0.26
SH3TC2-208ENST00000510779 PLCB4Q15147 1175 aa13.45□□□□□ -0.26
SH3TC2-208ENST00000510779 LSM14BQ9BX40 385 aaKnown RBP13.45□□□□□ -0.26
SH3TC2-208ENST00000510779 ZHX3Q9H4I2 956 aa13.45□□□□□ -0.26
SH3TC2-208ENST00000510779 VAT1LQ9HCJ6 419 aa13.45□□□□□ -0.26
SH3TC2-208ENST00000510779 KBTBD4Q9NVX7 518 aa13.45□□□□□ -0.26
SH3TC2-208ENST00000510779 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.45□□□□□ -0.26
SH3TC2-208ENST00000510779 ATP8A1Q9Y2Q0 1164 aa13.45□□□□□ -0.26
SH3TC2-208ENST00000510779 MYH13Q9UKX3 1938 aa13.45□□□□□ -0.26
SH3TC2-208ENST00000510779 A0A1W2PQJ5 194 aa13.45□□□□□ -0.26
SH3TC2-208ENST00000510779 TRAF5O00463 557 aa13.45□□□□□ -0.26
SH3TC2-208ENST00000510779 DAPK3O43293 454 aa13.45□□□□□ -0.26
SH3TC2-208ENST00000510779 PDE8AO60658 829 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms