RNA–Protein interactions for RNA: ENST00000509093.5

COPS4-206, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 2 BASIC

Gene COPS4, Length 2,273 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-206ENST00000509093 CCDC148Q8NFR7 591 aa12.5□□□□□ -0.41
COPS4-206ENST00000509093 TNFRSF25Q93038 417 aa12.5□□□□□ -0.41
COPS4-206ENST00000509093 CLIC6Q96NY7 704 aa12.5□□□□□ -0.41
COPS4-206ENST00000509093 PIGSQ96S52 555 aa12.5□□□□□ -0.41
COPS4-206ENST00000509093 SPZ1Q9BXG8 430 aa12.5□□□□□ -0.41
COPS4-206ENST00000509093 EBAG9O00559 213 aa12.49□□□□□ -0.41
COPS4-206ENST00000509093 MFAP3LO75121 409 aa12.49□□□□□ -0.41
COPS4-206ENST00000509093 YBX3P16989 372 aaKnown RBP eCLIP12.49□□□□□ -0.41
COPS4-206ENST00000509093 FECHP22830 423 aa12.49□□□□□ -0.41
COPS4-206ENST00000509093 SLC16A2P36021 539 aa12.49□□□□□ -0.41
COPS4-206ENST00000509093 MNAT1P51948 309 aa12.49□□□□□ -0.41
COPS4-206ENST00000509093 ICA1Q05084 483 aa12.49□□□□□ -0.41
COPS4-206ENST00000509093 ZNF543Q08ER8 600 aa12.49□□□□□ -0.41
COPS4-206ENST00000509093 RASA3Q14644 834 aa12.49□□□□□ -0.41
COPS4-206ENST00000509093 FKBP1CQ5VVH2 108 aa12.49□□□□□ -0.41
COPS4-206ENST00000509093 TMEM179Q6ZVK1 233 aa12.49□□□□□ -0.41
COPS4-206ENST00000509093 HEATR3Q7Z4Q2 680 aa12.49□□□□□ -0.41
COPS4-206ENST00000509093 LZTS2Q9BRK4 669 aa12.49□□□□□ -0.41
COPS4-206ENST00000509093 KANSL2Q9H9L4 492 aa12.49□□□□□ -0.41
COPS4-206ENST00000509093 KCNH3Q9ULD8 1083 aa12.49□□□□□ -0.41
COPS4-206ENST00000509093 PCDHB6Q9Y5E3 794 aa12.49□□□□□ -0.41
COPS4-206ENST00000509093 FAM169AQ9Y6X4 670 aa12.49□□□□□ -0.41
COPS4-206ENST00000509093 A0A1W2PRG0 241 aa12.49□□□□□ -0.41
COPS4-206ENST00000509093 STXBP3O00186 592 aa12.49□□□□□ -0.41
COPS4-206ENST00000509093 TFRCP02786 760 aaKnown RBP12.49□□□□□ -0.41
COPS4-206ENST00000509093 MDM2Q00987 491 aaPredicted RBP12.49□□□□□ -0.41
COPS4-206ENST00000509093 NT5DC1Q5TFE4 455 aa12.49□□□□□ -0.41
COPS4-206ENST00000509093 CNPY4Q8N129 248 aa12.49□□□□□ -0.41
COPS4-206ENST00000509093 TRIML1Q8N9V2 468 aa12.49□□□□□ -0.41
COPS4-206ENST00000509093 FAM76AQ8TAV0 307 aa12.49□□□□□ -0.41
COPS4-206ENST00000509093 RASGRP4Q8TDF6 673 aa12.49□□□□□ -0.41
COPS4-206ENST00000509093 CCDC51Q96ER9 411 aa12.49□□□□□ -0.41
COPS4-206ENST00000509093 NYAP2Q9P242 653 aa12.49□□□□□ -0.41
COPS4-206ENST00000509093 CCT5P48643 541 aa12.48□□□□□ -0.41
COPS4-206ENST00000509093 USP14P54578 494 aa12.48□□□□□ -0.41
COPS4-206ENST00000509093 RBL2Q08999 1139 aa12.48□□□□□ -0.41
COPS4-206ENST00000509093 STIM1Q13586 685 aa12.48□□□□□ -0.41
COPS4-206ENST00000509093 CCDC96Q2M329 555 aa12.48□□□□□ -0.41
COPS4-206ENST00000509093 ASPRV1Q53RT3 343 aa12.48□□□□□ -0.41
COPS4-206ENST00000509093 FAM83AQ86UY5 434 aa12.48□□□□□ -0.41
COPS4-206ENST00000509093 COG1Q8WTW3 980 aa12.48□□□□□ -0.41
COPS4-206ENST00000509093 MKL1Q969V6 931 aa12.48□□□□□ -0.41
COPS4-206ENST00000509093 TACO1Q9BSH4 297 aaKnown RBP12.48□□□□□ -0.41
COPS4-206ENST00000509093 RIOX1Q9H6W3 641 aa12.48□□□□□ -0.41
COPS4-206ENST00000509093 HERC5Q9UII4 1024 aaKnown RBP12.48□□□□□ -0.41
COPS4-206ENST00000509093 MYO6Q9UM54 1294 aa12.48□□□□□ -0.41
COPS4-206ENST00000509093 ATXN2Q99700 1313 aaKnown RBP12.48□□□□□ -0.41
COPS4-206ENST00000509093 LMNB1P20700 586 aa12.48□□□□□ -0.41
COPS4-206ENST00000509093 PBX1P40424 430 aa12.48□□□□□ -0.41
COPS4-206ENST00000509093 MORC3Q14149 939 aa12.48□□□□□ -0.41
COPS4-206ENST00000509093 POSTNQ15063 836 aa12.48□□□□□ -0.41
COPS4-206ENST00000509093 CCDC84Q86UT8 332 aaPredicted RBP12.48□□□□□ -0.41
COPS4-206ENST00000509093 CNGA4Q8IV77 575 aa12.48□□□□□ -0.41
COPS4-206ENST00000509093 TRMT44Q8IYL2 757 aaKnown RBP12.48□□□□□ -0.41
COPS4-206ENST00000509093 BANK1Q8NDB2 785 aa12.48□□□□□ -0.41
COPS4-206ENST00000509093 TRPM4Q8TD43 1214 aa12.48□□□□□ -0.41
COPS4-206ENST00000509093 TEPSINQ96N21 525 aa12.48□□□□□ -0.41
COPS4-206ENST00000509093 NUP88Q99567 741 aaPredicted RBP12.48□□□□□ -0.41
COPS4-206ENST00000509093 A1CFQ9NQ94 594 aaKnown RBP12.48□□□□□ -0.41
COPS4-206ENST00000509093 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.48□□□□□ -0.41
COPS4-206ENST00000509093 HACL1Q9UJ83 578 aa12.48□□□□□ -0.41
COPS4-206ENST00000509093 TARSL2A2RTX5 802 aaKnown RBP12.47□□□□□ -0.41
COPS4-206ENST00000509093 ERCC5P28715 1186 aaPredicted RBP12.47□□□□□ -0.41
COPS4-206ENST00000509093 ECE1P42892 770 aa12.47□□□□□ -0.41
COPS4-206ENST00000509093 SLFN13Q68D06 897 aa12.47□□□□□ -0.41
COPS4-206ENST00000509093 ADGRF4Q8IZF3 695 aa12.47□□□□□ -0.41
COPS4-206ENST00000509093 ACER1Q8TDN7 264 aa12.47□□□□□ -0.41
COPS4-206ENST00000509093 RRP36Q96EU6 259 aaKnown RBP12.47□□□□□ -0.41
COPS4-206ENST00000509093 SAMSN1Q9NSI8 373 aaKnown RBP12.47□□□□□ -0.41
COPS4-206ENST00000509093 BARHL2Q9NY43 387 aa12.47□□□□□ -0.41
COPS4-206ENST00000509093 MYH4Q9Y623 1939 aa12.47□□□□□ -0.41
COPS4-206ENST00000509093 USP17L10C9JJH3 530 aa12.46□□□□□ -0.41
COPS4-206ENST00000509093 FOXN1O15353 648 aa12.46□□□□□ -0.41
COPS4-206ENST00000509093 PRR29P0C7W0 189 aa12.46□□□□□ -0.41
COPS4-206ENST00000509093 INPP5BP32019 993 aa12.46□□□□□ -0.41
COPS4-206ENST00000509093 ARHGAP25P42331 645 aa12.46□□□□□ -0.41
COPS4-206ENST00000509093 SARSP49591 514 aaKnown RBP12.46□□□□□ -0.41
COPS4-206ENST00000509093 IRAK1P51617 712 aa12.46□□□□□ -0.41
COPS4-206ENST00000509093 GRIN1Q05586 938 aa12.46□□□□□ -0.41
COPS4-206ENST00000509093 PPFIA1Q13136 1202 aa12.46□□□□□ -0.41
COPS4-206ENST00000509093 KIAA1755Q5JYT7 1200 aa12.46□□□□□ -0.41
COPS4-206ENST00000509093 NCAPH2Q6IBW4 605 aa12.46□□□□□ -0.41
COPS4-206ENST00000509093 GBP6Q6ZN66 633 aa12.46□□□□□ -0.41
COPS4-206ENST00000509093 PIK3AP1Q6ZUJ8 805 aa12.46□□□□□ -0.41
COPS4-206ENST00000509093 APTXQ7Z2E3 356 aaKnown RBP12.46□□□□□ -0.41
COPS4-206ENST00000509093 CRACR2AQ9BSW2 395 aa12.46□□□□□ -0.41
COPS4-206ENST00000509093 JMJD4Q9H9V9 463 aa12.46□□□□□ -0.41
COPS4-206ENST00000509093 SH3GLB2Q9NR46 395 aa12.46□□□□□ -0.41
COPS4-206ENST00000509093 F5H6K3 240 aa12.46□□□□□ -0.42
COPS4-206ENST00000509093 TEX33O43247 280 aa12.46□□□□□ -0.42
COPS4-206ENST00000509093 PPP1R11O60927 126 aaPredicted RBP12.46□□□□□ -0.42
COPS4-206ENST00000509093 SMARCA1P28370 1054 aa12.46□□□□□ -0.42
COPS4-206ENST00000509093 GGCXP38435 758 aa12.46□□□□□ -0.42
COPS4-206ENST00000509093 EPS15P42566 896 aa12.46□□□□□ -0.42
COPS4-206ENST00000509093 SETQ01105 290 aaPredicted RBP12.46□□□□□ -0.42
COPS4-206ENST00000509093 KLRC3Q07444 240 aa12.46□□□□□ -0.42
COPS4-206ENST00000509093 RILPL1Q5EBL4 403 aa12.46□□□□□ -0.42
COPS4-206ENST00000509093 PRAMEF18Q5VWM3 479 aa12.46□□□□□ -0.42
COPS4-206ENST00000509093 FBXW10Q5XX13 1052 aa12.46□□□□□ -0.42
COPS4-206ENST00000509093 TMTC1Q8IUR5 882 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms