RNA–Protein interactions for RNA: ENST00000508952.5

PACRGL-220, Transcript of parkin coregulated like, humanhuman

TSL 1 (best)

Gene PACRGL, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRGL-220ENST00000508952 CHMP4BP1P59074 171 aa25.56■■□□□ 1.68
PACRGL-220ENST00000508952 PGM5Q15124 567 aa25.56■■□□□ 1.68
PACRGL-220ENST00000508952 ZNF365Q70YC5 407 aa25.56■■□□□ 1.68
PACRGL-220ENST00000508952 FCHSD1Q86WN1 690 aa25.56■■□□□ 1.68
PACRGL-220ENST00000508952 TMEM87BQ96K49 555 aa25.56■■□□□ 1.68
PACRGL-220ENST00000508952 IL23AQ9NPF7 189 aa25.56■■□□□ 1.68
PACRGL-220ENST00000508952 DDX41Q9UJV9 622 aaKnown RBP25.56■■□□□ 1.68
PACRGL-220ENST00000508952 MRVI1Q9Y6F6 885 aa25.56■■□□□ 1.68
PACRGL-220ENST00000508952 PLEKHA8P1O95397 391 aa25.55■■□□□ 1.68
PACRGL-220ENST00000508952 MMP3P08254 477 aa25.55■■□□□ 1.68
PACRGL-220ENST00000508952 KIF5BP33176 963 aa25.55■■□□□ 1.68
PACRGL-220ENST00000508952 PSRC1Q6PGN9 363 aaPredicted RBP25.55■■□□□ 1.68
PACRGL-220ENST00000508952 RAB11FIP4Q86YS3 637 aa25.55■■□□□ 1.68
PACRGL-220ENST00000508952 SAMD3Q8N6K7 520 aa25.55■■□□□ 1.68
PACRGL-220ENST00000508952 ZFP91Q96JP5 570 aaPredicted RBP25.55■■□□□ 1.68
PACRGL-220ENST00000508952 SPZ1Q9BXG8 430 aa25.55■■□□□ 1.68
PACRGL-220ENST00000508952 RGS20O76081 388 aa25.54■■□□□ 1.68
PACRGL-220ENST00000508952 RRP36Q96EU6 259 aaKnown RBP25.54■■□□□ 1.68
PACRGL-220ENST00000508952 TTYH1Q9H313 450 aaPredicted RBP25.54■■□□□ 1.68
PACRGL-220ENST00000508952 CDH23Q9H251 3354 aa25.53■■□□□ 1.68
PACRGL-220ENST00000508952 SUPT20HL2P0C7V6 817 aa25.53■■□□□ 1.68
PACRGL-220ENST00000508952 LIFRP42702 1097 aa25.53■■□□□ 1.68
PACRGL-220ENST00000508952 RASIP1Q5U651 963 aa25.53■■□□□ 1.68
PACRGL-220ENST00000508952 NFRKBQ6P4R8 1299 aa25.53■■□□□ 1.68
PACRGL-220ENST00000508952 VSIG10LQ86VR7 867 aa25.53■■□□□ 1.68
PACRGL-220ENST00000508952 CMTR1Q8N1G2 835 aaKnown RBP25.53■■□□□ 1.68
PACRGL-220ENST00000508952 TMTC2Q8N394 836 aa25.53■■□□□ 1.68
PACRGL-220ENST00000508952 SCLYQ96I15 445 aa25.53■■□□□ 1.68
PACRGL-220ENST00000508952 SEMA6BQ9H3T3 888 aa25.53■■□□□ 1.68
PACRGL-220ENST00000508952 HSFX4A0A1B0GTS1 333 aaPredicted RBP25.52■■□□□ 1.68
PACRGL-220ENST00000508952 HSFX3A0A1B0GWH4 333 aaPredicted RBP25.52■■□□□ 1.68
PACRGL-220ENST00000508952 SORBS3O60504 671 aa25.52■■□□□ 1.68
PACRGL-220ENST00000508952 CDC45O75419 566 aa25.52■■□□□ 1.68
PACRGL-220ENST00000508952 SRBD1Q8N5C6 995 aaKnown RBP25.52■■□□□ 1.68
PACRGL-220ENST00000508952 SCN5AQ14524 2016 aa25.52■■□□□ 1.68
PACRGL-220ENST00000508952 CCND2P30279 289 aa25.51■■□□□ 1.67
PACRGL-220ENST00000508952 RNF20Q5VTR2 975 aa25.51■■□□□ 1.67
PACRGL-220ENST00000508952 KAT2BQ92831 832 aa25.51■■□□□ 1.67
PACRGL-220ENST00000508952 EMID1Q96A84 441 aaPredicted RBP25.51■■□□□ 1.67
PACRGL-220ENST00000508952 CCDC136Q96JN2 1154 aa25.51■■□□□ 1.67
PACRGL-220ENST00000508952 LZTS2Q9BRK4 669 aa25.51■■□□□ 1.67
PACRGL-220ENST00000508952 SEC63Q9UGP8 760 aaKnown RBP25.51■■□□□ 1.67
PACRGL-220ENST00000508952 SLC12A7Q9Y666 1083 aa25.51■■□□□ 1.67
PACRGL-220ENST00000508952 GRXCR1A8MXD5 290 aa25.5■■□□□ 1.67
PACRGL-220ENST00000508952 CASTP20810 708 aaKnown RBP25.5■■□□□ 1.67
PACRGL-220ENST00000508952 DNAJB2P25686 324 aa25.5■■□□□ 1.67
PACRGL-220ENST00000508952 SMARCA1P28370 1054 aa25.5■■□□□ 1.67
PACRGL-220ENST00000508952 GNAQP50148 359 aa25.5■■□□□ 1.67
PACRGL-220ENST00000508952 LAMC2Q13753 1193 aa25.5■■□□□ 1.67
PACRGL-220ENST00000508952 DHX37Q8IY37 1157 aaKnown RBP25.5■■□□□ 1.67
PACRGL-220ENST00000508952 SLC17A8Q8NDX2 589 aa25.5■■□□□ 1.67
PACRGL-220ENST00000508952 GPKOWQ92917 476 aaPredicted RBP eCLIP25.5■■□□□ 1.67
PACRGL-220ENST00000508952 CDX2Q99626 313 aaPredicted RBP25.5■■□□□ 1.67
PACRGL-220ENST00000508952 CXXC1Q9P0U4 656 aaPredicted RBP25.5■■□□□ 1.67
PACRGL-220ENST00000508952 FGBP02675 491 aa25.49■■□□□ 1.67
PACRGL-220ENST00000508952 CALM1P0DP23 149 aa25.49■■□□□ 1.67
PACRGL-220ENST00000508952 CALM2P0DP24 149 aa25.49■■□□□ 1.67
PACRGL-220ENST00000508952 CALM3P0DP25 149 aa25.49■■□□□ 1.67
PACRGL-220ENST00000508952 PTPN11Q06124 597 aaPredicted RBP25.49■■□□□ 1.67
PACRGL-220ENST00000508952 DGKDQ16760 1214 aa25.49■■□□□ 1.67
PACRGL-220ENST00000508952 OTOP2Q7RTS6 562 aa25.49■■□□□ 1.67
PACRGL-220ENST00000508952 RASEFQ8IZ41 740 aa25.49■■□□□ 1.67
PACRGL-220ENST00000508952 HERVK_113Q902F9 699 aa25.49■■□□□ 1.67
PACRGL-220ENST00000508952 VWCEQ96DN2 955 aa25.49■■□□□ 1.67
PACRGL-220ENST00000508952 TCEANC2Q96MN5 208 aa25.49■■□□□ 1.67
PACRGL-220ENST00000508952 TANC1Q9C0D5 1861 aa25.49■■□□□ 1.67
PACRGL-220ENST00000508952 EYSQ5T1H1 3165 aa25.48■■□□□ 1.67
PACRGL-220ENST00000508952 FRMPD4Q14CM0 1322 aa25.48■■□□□ 1.67
PACRGL-220ENST00000508952 hCG_1642624A0A1W2PR95 340 aa25.48■■□□□ 1.67
PACRGL-220ENST00000508952 GGPS1O95749 300 aa25.48■■□□□ 1.67
PACRGL-220ENST00000508952 ZNF286BP0CG31 522 aa25.48■■□□□ 1.67
PACRGL-220ENST00000508952 UBA1P22314 1058 aaKnown RBP25.48■■□□□ 1.67
PACRGL-220ENST00000508952 SP2Q02086 613 aa25.48■■□□□ 1.67
PACRGL-220ENST00000508952 MYSM1Q5VVJ2 828 aa25.48■■□□□ 1.67
PACRGL-220ENST00000508952 USP17L6PQ6QN14 398 aa25.48■■□□□ 1.67
PACRGL-220ENST00000508952 MICU3Q86XE3 530 aa25.48■■□□□ 1.67
PACRGL-220ENST00000508952 CCDC82Q8N4S0 544 aa25.48■■□□□ 1.67
PACRGL-220ENST00000508952 PPTC7Q8NI37 304 aa25.48■■□□□ 1.67
PACRGL-220ENST00000508952 NEK1Q96PY6 1258 aa25.48■■□□□ 1.67
PACRGL-220ENST00000508952 NOD1Q9Y239 953 aa25.48■■□□□ 1.67
PACRGL-220ENST00000508952 GBF1Q92538 1859 aa25.48■■□□□ 1.67
PACRGL-220ENST00000508952 DOCK5Q9H7D0 1870 aa25.47■■□□□ 1.67
PACRGL-220ENST00000508952 PBX2P40425 430 aa25.47■■□□□ 1.67
PACRGL-220ENST00000508952 MRPS9P82933 396 aaKnown RBP25.47■■□□□ 1.67
PACRGL-220ENST00000508952 ADCK5Q3MIX3 580 aa25.47■■□□□ 1.67
PACRGL-220ENST00000508952 CELF3Q5SZQ8 465 aaKnown RBP25.47■■□□□ 1.67
PACRGL-220ENST00000508952 KCNV1Q6PIU1 500 aa25.47■■□□□ 1.67
PACRGL-220ENST00000508952 SGMS1Q86VZ5 419 aa25.47■■□□□ 1.67
PACRGL-220ENST00000508952 SMARCC2Q8TAQ2 1214 aa25.47■■□□□ 1.67
PACRGL-220ENST00000508952 CHD9Q3L8U1 2897 aa25.46■■□□□ 1.67
PACRGL-220ENST00000508952 TRIP12Q14669 1992 aaPredicted RBP25.46■■□□□ 1.67
PACRGL-220ENST00000508952 TMEM265A0A087WTH1 108 aa25.46■■□□□ 1.67
PACRGL-220ENST00000508952 PSEN2P49810 448 aa25.46■■□□□ 1.67
PACRGL-220ENST00000508952 PTGISQ16647 500 aa25.46■■□□□ 1.67
PACRGL-220ENST00000508952 HSDL1Q3SXM5 330 aa25.46■■□□□ 1.67
PACRGL-220ENST00000508952 GDF6Q6KF10 455 aaPredicted RBP25.46■■□□□ 1.67
PACRGL-220ENST00000508952 TMTC3Q6ZXV5 915 aa25.46■■□□□ 1.67
PACRGL-220ENST00000508952 DEFB128Q7Z7B8 93 aa25.46■■□□□ 1.67
PACRGL-220ENST00000508952 RPUSD2Q8IZ73 545 aaKnown RBP25.46■■□□□ 1.67
PACRGL-220ENST00000508952 FANCBQ8NB91 859 aa25.46■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms