RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 EXOSC10Q01780 885 aaKnown RBP5.46□□□□□ -1.54
SMARCA5-202ENST00000508573 RASA3Q14644 834 aa5.46□□□□□ -1.54
SMARCA5-202ENST00000508573 RTP5Q14D33 572 aa5.46□□□□□ -1.54
SMARCA5-202ENST00000508573 ZXDCQ2QGD7 858 aaPredicted RBP5.46□□□□□ -1.54
SMARCA5-202ENST00000508573 LRRFIP1Q32MZ4 808 aaKnown RBP5.46□□□□□ -1.54
SMARCA5-202ENST00000508573 HLA-DQA1Q5Y7H0 255 aa5.46□□□□□ -1.54
SMARCA5-202ENST00000508573 RINLQ6ZS11 566 aa5.46□□□□□ -1.54
SMARCA5-202ENST00000508573 ADGRG2Q8IZP9 1017 aa5.46□□□□□ -1.54
SMARCA5-202ENST00000508573 APPBP2Q92624 585 aa5.46□□□□□ -1.54
SMARCA5-202ENST00000508573 GPRASP2Q96D09 838 aa5.46□□□□□ -1.54
SMARCA5-202ENST00000508573 DEPDC7Q96QD5 511 aa5.46□□□□□ -1.54
SMARCA5-202ENST00000508573 SLC9A7Q96T83 725 aa5.46□□□□□ -1.54
SMARCA5-202ENST00000508573 FAM126AQ9BYI3 521 aaPredicted RBP5.46□□□□□ -1.54
SMARCA5-202ENST00000508573 KCNQ5Q9NR82 932 aa5.46□□□□□ -1.54
SMARCA5-202ENST00000508573 UBP1Q9NZI7 540 aa5.46□□□□□ -1.54
SMARCA5-202ENST00000508573 SUSD2Q9UGT4 822 aa5.46□□□□□ -1.54
SMARCA5-202ENST00000508573 KLF4O43474 513 aa5.45□□□□□ -1.54
SMARCA5-202ENST00000508573 EPB41L2O43491 1005 aaKnown RBP5.45□□□□□ -1.54
SMARCA5-202ENST00000508573 PLIN1O60240 522 aa5.45□□□□□ -1.54
SMARCA5-202ENST00000508573 GSNP06396 782 aa5.45□□□□□ -1.54
SMARCA5-202ENST00000508573 INSRRP14616 1297 aa5.45□□□□□ -1.54
SMARCA5-202ENST00000508573 ETFBP38117 255 aa5.45□□□□□ -1.54
SMARCA5-202ENST00000508573 ZNF165P49910 485 aa5.45□□□□□ -1.54
SMARCA5-202ENST00000508573 FOXO4P98177 505 aa5.45□□□□□ -1.54
SMARCA5-202ENST00000508573 POU5F1BQ06416 359 aa5.45□□□□□ -1.54
SMARCA5-202ENST00000508573 APOBRQ0VD83 1088 aa5.45□□□□□ -1.54
SMARCA5-202ENST00000508573 HDAC1Q13547 482 aaPredicted RBP5.45□□□□□ -1.54
SMARCA5-202ENST00000508573 LRRC41Q15345 812 aa5.45□□□□□ -1.54
SMARCA5-202ENST00000508573 TARBP2Q15633 366 aaKnown RBP5.45□□□□□ -1.54
SMARCA5-202ENST00000508573 ZRSR2Q15696 482 aaKnown RBP5.45□□□□□ -1.54
SMARCA5-202ENST00000508573 PLEKHN1Q494U1 663 aaPredicted RBP5.45□□□□□ -1.54
SMARCA5-202ENST00000508573 SPATS1Q496A3 300 aa5.45□□□□□ -1.54
SMARCA5-202ENST00000508573 RTP2Q5QGT7 225 aa5.45□□□□□ -1.54
SMARCA5-202ENST00000508573 CWF19L1Q69YN2 538 aaKnown RBP5.45□□□□□ -1.54
SMARCA5-202ENST00000508573 ANKS3Q6ZW76 656 aa5.45□□□□□ -1.54
SMARCA5-202ENST00000508573 CCDC144CPQ8IYA2 1237 aa5.45□□□□□ -1.54
SMARCA5-202ENST00000508573 REXO1Q8N1G1 1221 aaKnown RBP5.45□□□□□ -1.54
SMARCA5-202ENST00000508573 NKD1Q969G9 470 aa5.45□□□□□ -1.54
SMARCA5-202ENST00000508573 PAGR1Q9BTK6 254 aa5.45□□□□□ -1.54
SMARCA5-202ENST00000508573 INO80BQ9C086 356 aaPredicted RBP5.45□□□□□ -1.54
SMARCA5-202ENST00000508573 TMPRSS5Q9H3S3 457 aa5.45□□□□□ -1.54
SMARCA5-202ENST00000508573 GGT7Q9UJ14 662 aa5.45□□□□□ -1.54
SMARCA5-202ENST00000508573 HCFC2Q9Y5Z7 792 aa5.45□□□□□ -1.54
SMARCA5-202ENST00000508573 SCINQ9Y6U3 715 aa5.45□□□□□ -1.54
SMARCA5-202ENST00000508573 A0A1B0GTL3 188 aa5.44□□□□□ -1.54
SMARCA5-202ENST00000508573 TNFRSF10CO14798 259 aa5.44□□□□□ -1.54
SMARCA5-202ENST00000508573 KRT18P05783 430 aaKnown RBP5.44□□□□□ -1.54
SMARCA5-202ENST00000508573 POU3F3P20264 500 aaPredicted RBP5.44□□□□□ -1.54
SMARCA5-202ENST00000508573 IGFBP6P24592 240 aaPredicted RBP5.44□□□□□ -1.54
SMARCA5-202ENST00000508573 TKFCQ3LXA3 575 aa5.44□□□□□ -1.54
SMARCA5-202ENST00000508573 CCDC184Q52MB2 194 aa5.44□□□□□ -1.54
SMARCA5-202ENST00000508573 NOL9Q5SY16 702 aaKnown RBP5.44□□□□□ -1.54
SMARCA5-202ENST00000508573 UBXN11Q5T124 520 aa5.44□□□□□ -1.54
SMARCA5-202ENST00000508573 BICRALQ6AI39 1079 aa5.44□□□□□ -1.54
SMARCA5-202ENST00000508573 HS2ST1Q7LGA3 356 aa5.44□□□□□ -1.54
SMARCA5-202ENST00000508573 C7orf61Q8IZ16 206 aa5.44□□□□□ -1.54
SMARCA5-202ENST00000508573 SDR16C5Q8N3Y7 309 aa5.44□□□□□ -1.54
SMARCA5-202ENST00000508573 BORCS6Q96GS4 357 aa5.44□□□□□ -1.54
SMARCA5-202ENST00000508573 DHRS1Q96LJ7 313 aa5.44□□□□□ -1.54
SMARCA5-202ENST00000508573 SLC12A9Q9BXP2 914 aa5.44□□□□□ -1.54
SMARCA5-202ENST00000508573 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.44□□□□□ -1.54
SMARCA5-202ENST00000508573 ADAMTS1Q9UHI8 967 aa5.44□□□□□ -1.54
SMARCA5-202ENST00000508573 KCNG1Q9UIX4 513 aa5.44□□□□□ -1.54
SMARCA5-202ENST00000508573 F8W031 263 aaPredicted RBP5.43□□□□□ -1.54
SMARCA5-202ENST00000508573 FOSP01100 380 aaPredicted RBP5.43□□□□□ -1.54
SMARCA5-202ENST00000508573 SSBP05455 408 aaKnown RBP eCLIP5.43□□□□□ -1.54
SMARCA5-202ENST00000508573 MAN1A1P33908 653 aa5.43□□□□□ -1.54
SMARCA5-202ENST00000508573 RAB33AQ14088 237 aa5.43□□□□□ -1.54
SMARCA5-202ENST00000508573 C10orf62Q5T681 223 aaPredicted RBP5.43□□□□□ -1.54
SMARCA5-202ENST00000508573 NT5DC1Q5TFE4 455 aa5.43□□□□□ -1.54
SMARCA5-202ENST00000508573 EFCAB2Q5VUJ9 269 aa5.43□□□□□ -1.54
SMARCA5-202ENST00000508573 PAQR3Q6TCH7 311 aa5.43□□□□□ -1.54
SMARCA5-202ENST00000508573 RASGRP4Q8TDF6 673 aa5.43□□□□□ -1.54
SMARCA5-202ENST00000508573 FNIP1Q8TF40 1166 aa5.43□□□□□ -1.54
SMARCA5-202ENST00000508573 PPM1EQ8WY54 764 aa5.43□□□□□ -1.54
SMARCA5-202ENST00000508573 BRF1Q92994 677 aa5.43□□□□□ -1.54
SMARCA5-202ENST00000508573 NEUROD6Q96NK8 337 aa5.43□□□□□ -1.54
SMARCA5-202ENST00000508573 DNAJC7Q99615 494 aa5.43□□□□□ -1.54
SMARCA5-202ENST00000508573 GPR20Q99678 358 aa5.43□□□□□ -1.54
SMARCA5-202ENST00000508573 USP40Q9NVE5 1235 aa5.43□□□□□ -1.54
SMARCA5-202ENST00000508573 DBR1Q9UK59 544 aaKnown RBP5.43□□□□□ -1.54
SMARCA5-202ENST00000508573 C9IYK1 514 aa5.42□□□□□ -1.54
SMARCA5-202ENST00000508573 ALDH1L1O75891 902 aa5.42□□□□□ -1.54
SMARCA5-202ENST00000508573 CYBBP04839 570 aa5.42□□□□□ -1.54
SMARCA5-202ENST00000508573 MYL1P05976 194 aa5.42□□□□□ -1.54
SMARCA5-202ENST00000508573 DBHP09172 617 aa5.42□□□□□ -1.54
SMARCA5-202ENST00000508573 COL6A1P12109 1028 aa5.42□□□□□ -1.54
SMARCA5-202ENST00000508573 ATF2P15336 505 aa5.42□□□□□ -1.54
SMARCA5-202ENST00000508573 COPB2P35606 906 aa5.42□□□□□ -1.54
SMARCA5-202ENST00000508573 NOP2P46087 812 aaKnown RBP5.42□□□□□ -1.54
SMARCA5-202ENST00000508573 PRR5P85299 388 aa5.42□□□□□ -1.54
SMARCA5-202ENST00000508573 CAP1Q01518 475 aa5.42□□□□□ -1.54
SMARCA5-202ENST00000508573 EFEMP1Q12805 493 aa5.42□□□□□ -1.54
SMARCA5-202ENST00000508573 SQSTM1Q13501 440 aa5.42□□□□□ -1.54
SMARCA5-202ENST00000508573 MAPRE1Q15691 268 aaKnown RBP5.42□□□□□ -1.54
SMARCA5-202ENST00000508573 PPP4R4Q6NUP7 873 aa5.42□□□□□ -1.54
SMARCA5-202ENST00000508573 KRT26Q7Z3Y9 468 aa5.42□□□□□ -1.54
SMARCA5-202ENST00000508573 LRP10Q7Z4F1 713 aa5.42□□□□□ -1.54
SMARCA5-202ENST00000508573 C14orf80Q86SX3 495 aa5.42□□□□□ -1.54
SMARCA5-202ENST00000508573 HOMER1Q86YM7 354 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms